RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 CLEC20AQ6ZU45 233 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 RCOR2Q8IZ40 523 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 ZDHHC14Q8IZN3 488 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 LRRC43Q8N309 656 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 ANKRD42Q8N9B4 389 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 C1orf54Q8WWF1 131 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 PCED1BQ96HM7 432 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 PKMYT1Q99640 499 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 LPIN3Q9BQK8 851 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 TMEM106CQ9BVX2 250 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 COLEC11Q9BWP8 271 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 NRDE2Q9H7Z3 1164 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 PNPLA8Q9NP80 782 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 ABCF3Q9NUQ8 709 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 SMG5Q9UPR3 1016 aaKnown RBP12.03□□□□□ -0.48
RFFL-205ENST00000415395 USTQ9Y2C2 406 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 TIMM13Q9Y5L4 95 aaPredicted RBP12.03□□□□□ -0.48
RFFL-205ENST00000415395 ABHD14A-ACY1A0A1B0GW23 586 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 CARNS1A5YM72 827 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 B4GALT3O60512 393 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 OAZ2O95190 189 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 ITGB1P05556 798 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 SSR1P43307 286 aaKnown RBP12.03□□□□□ -0.48
RFFL-205ENST00000415395 E2F5Q15329 346 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 TCTN1Q2MV58 587 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 CCDC38Q502W7 563 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 PAN2Q504Q3 1202 aaKnown RBP12.03□□□□□ -0.48
RFFL-205ENST00000415395 VSTM1Q6UX27 236 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 PIGZQ86VD9 579 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 HASPINQ8TF76 798 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 PAWRQ96IZ0 340 aaKnown RBP12.03□□□□□ -0.48
RFFL-205ENST00000415395 DDX23Q9BUQ8 820 aaKnown RBP12.03□□□□□ -0.48
RFFL-205ENST00000415395 OXCT2Q9BYC2 517 aaPredicted RBP12.03□□□□□ -0.48
RFFL-205ENST00000415395 CSNK1G1Q9HCP0 422 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 KRT82Q9NSB4 513 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 NINJ2Q9NZG7 142 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 ADAM28Q9UKQ2 775 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 VWA8A3KMH1 1905 aa12.02□□□□□ -0.48
RFFL-205ENST00000415395 CEP350Q5VT06 3117 aa12.02□□□□□ -0.48
RFFL-205ENST00000415395 MYBPHLA2RUH7 354 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 FAM47DPA6NHR8 397 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 I3L4J1 428 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 KIAA0355O15063 1070 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 HNRNPCL1O60812 293 aaKnown RBP12.02□□□□□ -0.49
RFFL-205ENST00000415395 LRCH4O75427 683 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 TADA2AO75478 443 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 AP1G2O75843 785 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 GABBR2O75899 941 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 DCTN3O75935 186 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 LUC7L3O95232 432 aaKnown RBP12.02□□□□□ -0.49
RFFL-205ENST00000415395 TIMP1P01033 207 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 ALDH2P05091 517 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 PDGFRAP16234 1089 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 SDC4P31431 198 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 PTPN9P43378 593 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 RASSF2P50749 326 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 SLC25A11Q02978 314 aaKnown RBP12.02□□□□□ -0.49
RFFL-205ENST00000415395 SNX1Q13596 522 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 LRRC26Q2I0M4 334 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 IZUMO3Q5VZ72 239 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 C4orf50Q6ZRC1 276 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 GSTA5Q7RTV2 222 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 DEFB128Q7Z7B8 93 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 SCUBE3Q8IX30 993 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 SCML4Q8N228 414 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 ZCCHC9Q8N567 271 aaKnown RBP12.02□□□□□ -0.49
RFFL-205ENST00000415395 EMC1Q8N766 993 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 RXFP2Q8WXD0 754 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 KHSRPQ92945 711 aaKnown RBP eCLIP12.02□□□□□ -0.49
RFFL-205ENST00000415395 MYLPFQ96A32 169 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 LRRC4Q9HBW1 653 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 AAASQ9NRG9 546 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 DNAJB4Q9UDY4 337 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 EFR3BQ9Y2G0 817 aa12.02□□□□□ -0.49
RFFL-205ENST00000415395 SF3B1O75533 1304 aaKnown RBP eCLIP12.01□□□□□ -0.498e-6■■■■■ 107
RFFL-205ENST00000415395 CLDN5O00501 218 aa12.01□□□□□ -0.49
RFFL-205ENST00000415395 NRP1O14786 923 aa12.01□□□□□ -0.49
RFFL-205ENST00000415395 HSPA1AP0DMV8 641 aaKnown RBP12.01□□□□□ -0.49
RFFL-205ENST00000415395 HSPA1BP0DMV9 641 aaKnown RBP12.01□□□□□ -0.49
RFFL-205ENST00000415395 IVDP26440 423 aa12.01□□□□□ -0.49
RFFL-205ENST00000415395 CHKAP35790 457 aa12.01□□□□□ -0.49
RFFL-205ENST00000415395 SPARCL1Q14515 664 aa12.01□□□□□ -0.49
RFFL-205ENST00000415395 LRRC14Q15048 493 aa12.01□□□□□ -0.49
RFFL-205ENST00000415395 KYNUQ16719 465 aa12.01□□□□□ -0.49
RFFL-205ENST00000415395 RAB41Q5JT25 222 aa12.01□□□□□ -0.49
RFFL-205ENST00000415395 SPDYAQ5MJ70 313 aa12.01□□□□□ -0.49
RFFL-205ENST00000415395 TDRPQ86YL5 185 aa12.01□□□□□ -0.49
RFFL-205ENST00000415395 DCP1BQ8IZD4 617 aaKnown RBP12.01□□□□□ -0.49
RFFL-205ENST00000415395 SIX6OS1Q8N1H7 587 aa12.01□□□□□ -0.49
RFFL-205ENST00000415395 AGGF1Q8N302 714 aaeCLIP12.01□□□□□ -0.49
RFFL-205ENST00000415395 TBC1D31Q96DN5 1066 aa12.01□□□□□ -0.49
RFFL-205ENST00000415395 PITPNM3Q9BZ71 974 aa12.01□□□□□ -0.49
RFFL-205ENST00000415395 CNGB3Q9NQW8 809 aa12.01□□□□□ -0.49
RFFL-205ENST00000415395 ARHGEF3Q9NR81 526 aa12.01□□□□□ -0.49
RFFL-205ENST00000415395 CHST7Q9NS84 486 aa12.01□□□□□ -0.49
RFFL-205ENST00000415395 PRKAG3Q9UGI9 489 aa12.01□□□□□ -0.49
RFFL-205ENST00000415395 C15orf41Q9Y2V0 281 aa12.01□□□□□ -0.49
RFFL-205ENST00000415395 STARD13Q9Y3M8 1113 aa12.01□□□□□ -0.49
RFFL-205ENST00000415395 OR6C75A6NL08 312 aa12□□□□□ -0.49
RFFL-205ENST00000415395 TBKBP1A7MCY6 615 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms