RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 SMIM35A0A1B0GVV1 85 aa4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 RHPN2P1A8MT19 583 aa4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 TMEM232C9JQI7 657 aa4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 AGPSO00116 658 aa4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 KIF3BO15066 747 aa4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 THAP12O43422 761 aa4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 GCATO75600 419 aa4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 APEHP13798 732 aaKnown RBP4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 ATF7P17544 494 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 COPB1P53618 953 aaKnown RBP4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 HNRNPA0Q13151 305 aaKnown RBP4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 MEX3CQ5U5Q3 659 aaKnown RBP4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 MIS18BP1Q6P0N0 1132 aa4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 USP49Q70CQ1 688 aa4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 ATP11CQ8NB49 1132 aa4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 SCARB1Q8WTV0 552 aa4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 RPL36ALQ969Q0 106 aaKnown RBP4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 TIFAQ96CG3 184 aa4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 WDYHV1Q96HA8 205 aa4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 VPS50Q96JG6 964 aa4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 SH2D3AQ9BRG2 576 aa4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 SELENOOQ9BVL4 669 aa4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 TMX4Q9H1E5 349 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 PNPLA8Q9NP80 782 aa4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 TBC1D23Q9NUY8 699 aa4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 VPS51Q9UID3 782 aa4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 RIMKLBQ9ULI2 386 aa4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 MAFFQ9ULX9 164 aa4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 PTPRKQ15262 1439 aa4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 CTTNBP2Q8WZ74 1663 aa4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 PQBP1O60828 265 aaKnown RBP4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 LDHAP00338 332 aaKnown RBP4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 COPB2P35606 906 aa4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 PIK3CBP42338 1070 aa4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 COPAP53621 1224 aa4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 ZNF543Q08ER8 600 aa4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 KCNAB1Q14722 419 aa4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 LARS2Q15031 903 aaKnown RBP4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 TRIP6Q15654 476 aaKnown RBP4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 SUPT20HL1Q3ZLR7 823 aa4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 PAPD7Q5XG87 772 aaKnown RBP4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 GET4Q7L5D6 327 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 METTL25Q8N6Q8 603 aa4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 C11orf44Q8N8P7 122 aa4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 PNPLA1Q8N8W4 532 aa4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 ZC3H10Q96K80 434 aaKnown RBP4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 SARGQ9BW04 601 aa4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 COLEC11Q9BWP8 271 aa4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 APOL5Q9BWW9 433 aa4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 CHMP4BQ9H444 224 aaKnown RBP4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 CHST12Q9NRB3 414 aa4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 GEMIN8Q9NWZ8 242 aaKnown RBP4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 RNF7Q9UBF6 113 aa4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 LPAR3Q9UBY5 353 aa4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 SCAF8Q9UPN6 1271 aaKnown RBP4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 HPSEQ9Y251 543 aa4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 SLC27A6Q9Y2P4 619 aa4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 PLEKHH2Q8IVE3 1493 aa4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 TEX14Q8IWB6 1497 aa4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 CCDC144AA2RUR9 1427 aa4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 UHRF1BP1Q6BDS2 1440 aa4.28□□□□□ -1.72
HMGB3P23-201ENST00000414981 DHX29Q7Z478 1369 aaKnown RBP4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 KIF15Q9NS87 1388 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 DNMBPQ6XZF7 1577 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 KIF7Q2M1P5 1343 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 DENND4BO75064 1496 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 GAPVD1Q14C86 1478 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 CLCA1A8K7I4 914 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 FCHO1O14526 889 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 DSCR3O14972 297 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 KCNQ3O43525 872 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 MOSPD3O75425 235 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 BCAR3O75815 825 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 CD53P19397 219 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 SFPQP23246 707 aaKnown RBP eCLIP4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 ADRA1DP25100 572 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 MCM5P33992 734 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 GNALP38405 381 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 EIF4A1P60842 406 aaKnown RBP4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 FHL3Q13643 280 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 TMEM65Q6PI78 240 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 VSTM1Q6UX27 236 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 CLEC9AQ6UXN8 241 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 RANBP10Q6VN20 620 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 LIX1LQ8IVB5 337 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 MBD3L2Q8NHZ7 208 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 IQCDQ96DY2 449 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 EDC3Q96F86 508 aaKnown RBP4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 KAZALD1Q96I82 304 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 FAM118BQ9BPY3 351 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 PAGR1Q9BTK6 254 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 ZBTB26Q9HCK0 441 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 SEMA5BQ9P283 1151 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 FZD4Q9ULV1 537 aa4.27□□□□□ -1.73
HMGB3P23-201ENST00000414981 ARHGEF12Q9NZN5 1544 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 SPATA31A1Q5TZJ5 1347 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 MBD5Q9P267 1494 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 CLIC1O00299 241 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 TMEM225BP0DP42 221 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms