RNA–Protein interactions for RNA: ENST00000414367.5

PCDH15-216, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 3,357 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-216ENST00000414367 HMGB4Q8WW32 186 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 PIGKQ92643 395 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 PSMG2Q969U7 264 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 CALR3Q96L12 384 aaKnown RBP7.02□□□□□ -1.29
PCDH15-216ENST00000414367 HEXIM2Q96MH2 286 aaKnown RBP7.02□□□□□ -1.29
PCDH15-216ENST00000414367 P2RY13Q9BPV8 354 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 EPN3Q9H201 632 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 CCDC134Q9H6E4 229 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 COL4A6Q14031 1691 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 GOLGA6BA6NDN3 693 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 CLDN5O00501 218 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 CHADO15335 359 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 CALUO43852 315 aaPredicted RBP7.02□□□□□ -1.29
PCDH15-216ENST00000414367 NFATC1O95644 943 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 NR2F2P24468 414 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 YWHAQP27348 245 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 TIE1P35590 1138 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 GCLMP48507 274 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 ZNF844Q08AG5 666 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 CETN1Q12798 172 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 TAF10Q12962 218 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 NCOA4Q13772 614 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 C10orf120Q5SQS8 335 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 NT5DC4Q86YG4 428 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 DEFB119Q8N690 84 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 CCDC26Q8TAB7 109 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 GTPBP2Q9BX10 602 aaKnown RBP7.02□□□□□ -1.29
PCDH15-216ENST00000414367 SLC46A2Q9BY10 475 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 CRISPLD1Q9H336 500 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 ARHGEF4Q9NR80 690 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 SLC2A4RGQ9NR83 387 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 CFAP97Q9P2B7 532 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 HESX1Q9UBX0 185 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 NAGPAQ9UK23 515 aa7.02□□□□□ -1.29
PCDH15-216ENST00000414367 SPTA1P02549 2419 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 NLRC5Q86WI3 1866 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 ARSAP15289 507 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 NPR3P17342 541 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 FLT3P36888 993 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 RAP1GAPP47736 663 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 NUBP1P53384 320 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 PUM1Q14671 1186 aaKnown RBP eCLIP7.01□□□□□ -1.29
PCDH15-216ENST00000414367 INTS6LQ5JSJ4 861 aaKnown RBP7.01□□□□□ -1.29
PCDH15-216ENST00000414367 DGKKQ5KSL6 1271 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 RTL10Q7L3V2 364 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 LRRTM3Q86VH5 581 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 MAGEC3Q8TD91 643 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 SNX19Q92543 992 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 DNASE1L2Q92874 299 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 HAPLN2Q9GZV7 340 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 MIR1-1HGQ9H1L0 117 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 GEMIN8Q9NWZ8 242 aaKnown RBP7.01□□□□□ -1.29
PCDH15-216ENST00000414367 CNOT8Q9UFF9 292 aaKnown RBP7.01□□□□□ -1.29
PCDH15-216ENST00000414367 CPQQ9Y646 472 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 FAM169AQ9Y6X4 670 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 GTPBP10A4D1E9 387 aaKnown RBP7.01□□□□□ -1.29
PCDH15-216ENST00000414367 MYO1FO00160 1098 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 SLC9A3R1O14745 358 aaPredicted RBP7.01□□□□□ -1.29
PCDH15-216ENST00000414367 CETN3O15182 167 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 RAD51CO43502 376 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 PPFIA2O75334 1257 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 RPP40O75818 363 aaKnown RBP7.01□□□□□ -1.29
PCDH15-216ENST00000414367 ALDH1A2O94788 518 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 PAX3P23760 479 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 LMO2P25791 158 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 LSP1P33241 339 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 MAPK8P45983 427 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 SLC7A5Q01650 507 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 SATB1Q01826 763 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 SIX1Q15475 284 aaPredicted RBP7.01□□□□□ -1.29
PCDH15-216ENST00000414367 KNOP1Q1ED39 458 aaKnown RBP7.01□□□□□ -1.29
PCDH15-216ENST00000414367 NAA35Q5VZE5 725 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 KIAA1324Q6UXG2 1013 aaKnown RBP7.01□□□□□ -1.29
PCDH15-216ENST00000414367 RALGPS2Q86X27 583 aaPredicted RBP7.01□□□□□ -1.29
PCDH15-216ENST00000414367 C10orf67Q8IYJ2 551 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 RNF139Q8WU17 664 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 ZNF317Q96PQ6 595 aaPredicted RBP7.01□□□□□ -1.29
PCDH15-216ENST00000414367 ACBD6Q9BR61 282 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 CAPS2Q9BXY5 557 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 CIPCQ9C0C6 399 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 LRRC4Q9HBW1 653 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 AGPAT3Q9NRZ7 376 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 PLK2Q9NYY3 685 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 INTUQ9ULD6 942 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 DERAQ9Y315 318 aa7.01□□□□□ -1.29
PCDH15-216ENST00000414367 WDFY4Q6ZS81 3184 aa7□□□□□ -1.29
PCDH15-216ENST00000414367 FAM47DPA6NHR8 397 aa7□□□□□ -1.29
PCDH15-216ENST00000414367 M0QZQ0 153 aa7□□□□□ -1.29
PCDH15-216ENST00000414367 KIAA0391O15091 583 aaKnown RBP7□□□□□ -1.29
PCDH15-216ENST00000414367 PALMO75781 387 aa7□□□□□ -1.29
PCDH15-216ENST00000414367 KRT14P02533 472 aa7□□□□□ -1.29
PCDH15-216ENST00000414367 TRIM49P0CI25 452 aa7□□□□□ -1.29
PCDH15-216ENST00000414367 TRIM49CP0CI26 452 aa7□□□□□ -1.29
PCDH15-216ENST00000414367 HAPLN1P10915 354 aaPredicted RBP7□□□□□ -1.29
PCDH15-216ENST00000414367 PTPN1P18031 435 aaKnown RBP7□□□□□ -1.29
PCDH15-216ENST00000414367 PROZP22891 400 aa7□□□□□ -1.29
PCDH15-216ENST00000414367 ADAM9Q13443 819 aa7□□□□□ -1.29
PCDH15-216ENST00000414367 RSPO4Q2I0M5 234 aaPredicted RBP7□□□□□ -1.29
PCDH15-216ENST00000414367 USP39Q53GS9 565 aaKnown RBP7□□□□□ -1.29
PCDH15-216ENST00000414367 SLC39A4Q6P5W5 647 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms