RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 FAM186AA6NE01 2351 aa27.53■■■□□ 2
VEGFA-207ENST00000413642 GTPBP10A4D1E9 387 aaKnown RBP27.52■■■□□ 2
VEGFA-207ENST00000413642 MSI1O43347 362 aaKnown RBP27.52■■■□□ 2
VEGFA-207ENST00000413642 THAP12O43422 761 aa27.52■■■□□ 2
VEGFA-207ENST00000413642 CACNG3O60359 315 aa27.52■■■□□ 2
VEGFA-207ENST00000413642 PRKCSHP14314 528 aaPredicted RBP27.52■■■□□ 2
VEGFA-207ENST00000413642 VWA3BQ502W6 1294 aa27.52■■■□□ 2
VEGFA-207ENST00000413642 ENOSF1Q7L5Y1 443 aa27.52■■■□□ 2
VEGFA-207ENST00000413642 FAM114A1Q8IWE2 563 aa27.52■■■□□ 2
VEGFA-207ENST00000413642 TERB1Q8NA31 727 aa27.52■■■□□ 2
VEGFA-207ENST00000413642 GAB3Q8WWW8 586 aa27.52■■■□□ 2
VEGFA-207ENST00000413642 DCLK3Q9C098 648 aa27.52■■■□□ 2
VEGFA-207ENST00000413642 NDST4Q9H3R1 872 aa27.52■■■□□ 2
VEGFA-207ENST00000413642 ABCC13Q9NSE7 274 aa27.52■■■□□ 2
VEGFA-207ENST00000413642 CYTH4Q9UIA0 394 aa27.52■■■□□ 2
VEGFA-207ENST00000413642 MYOFQ9NZM1 2061 aa27.52■■■□□ 2
VEGFA-207ENST00000413642 CCDC163A0A0D9SF12 145 aa27.51■■□□□ 1.99
VEGFA-207ENST00000413642 RPP40O75818 363 aaKnown RBP27.51■■□□□ 1.99
VEGFA-207ENST00000413642 CISD3P0C7P0 127 aa27.51■■□□□ 1.99
VEGFA-207ENST00000413642 TRIP4Q15650 581 aaPredicted RBP27.51■■□□□ 1.99
VEGFA-207ENST00000413642 CRY1Q16526 586 aa27.51■■□□□ 1.99
VEGFA-207ENST00000413642 LAIR1Q6GTX8 287 aa27.51■■□□□ 1.99
VEGFA-207ENST00000413642 DPY19L2P1Q6NXN4 242 aa27.51■■□□□ 1.99
VEGFA-207ENST00000413642 SCUBE3Q8IX30 993 aa27.51■■□□□ 1.99
VEGFA-207ENST00000413642 FAM160A2Q8N612 972 aaPredicted RBP27.51■■□□□ 1.99
VEGFA-207ENST00000413642 SHC3Q92529 594 aa27.51■■□□□ 1.99
VEGFA-207ENST00000413642 XPO6Q96QU8 1125 aaKnown RBP27.51■■□□□ 1.99
VEGFA-207ENST00000413642 PARD6AQ9NPB6 346 aa27.51■■□□□ 1.99
VEGFA-207ENST00000413642 ST7Q9NRC1 585 aa27.51■■□□□ 1.99
VEGFA-207ENST00000413642 OLA1Q9NTK5 396 aaKnown RBP27.51■■□□□ 1.99
VEGFA-207ENST00000413642 DNAJC12Q9UKB3 198 aa27.51■■□□□ 1.99
VEGFA-207ENST00000413642 GMEB2Q9UKD1 530 aa27.51■■□□□ 1.99
VEGFA-207ENST00000413642 INVSQ9Y283 1065 aa27.51■■□□□ 1.99
VEGFA-207ENST00000413642 ZNF510Q9Y2H8 683 aa27.51■■□□□ 1.99
VEGFA-207ENST00000413642 EP300Q09472 2414 aaPredicted RBP27.51■■□□□ 1.99
VEGFA-207ENST00000413642 OTOGLQ3ZCN5 2332 aa27.5■■□□□ 1.99
VEGFA-207ENST00000413642 KCNJ18B7U540 433 aa27.5■■□□□ 1.99
VEGFA-207ENST00000413642 PRRT4C9JH25 899 aa27.5■■□□□ 1.99
VEGFA-207ENST00000413642 DCLK1O15075 740 aa27.5■■□□□ 1.99
VEGFA-207ENST00000413642 ADAM23O75077 832 aa27.5■■□□□ 1.99
VEGFA-207ENST00000413642 PNMA6AP0CW24 399 aaPredicted RBP27.5■■□□□ 1.99
VEGFA-207ENST00000413642 TGM1P22735 817 aa27.5■■□□□ 1.99
VEGFA-207ENST00000413642 GNA15P30679 374 aa27.5■■□□□ 1.99
VEGFA-207ENST00000413642 KCNJ12Q14500 433 aa27.5■■□□□ 1.99
VEGFA-207ENST00000413642 FYB2Q5VWT5 728 aa27.5■■□□□ 1.99
VEGFA-207ENST00000413642 ANO7Q6IWH7 933 aa27.5■■□□□ 1.99
VEGFA-207ENST00000413642 RBM43Q6ZSC3 357 aaKnown RBP27.5■■□□□ 1.99
VEGFA-207ENST00000413642 KBTBD6Q86V97 674 aa27.5■■□□□ 1.99
VEGFA-207ENST00000413642 IRGQQ8WZA9 623 aa27.5■■□□□ 1.99
VEGFA-207ENST00000413642 PLD4Q96BZ4 506 aa27.5■■□□□ 1.99
VEGFA-207ENST00000413642 TPSD1Q9BZJ3 242 aa27.5■■□□□ 1.99
VEGFA-207ENST00000413642 GVINP1Q7Z2Y8 2422 aa27.5■■□□□ 1.99
VEGFA-207ENST00000413642 LTFP02788 710 aa27.49■■□□□ 1.99
VEGFA-207ENST00000413642 WASP42768 502 aa27.49■■□□□ 1.99
VEGFA-207ENST00000413642 RPL34P49207 117 aaKnown RBP27.49■■□□□ 1.99
VEGFA-207ENST00000413642 DGKEP52429 567 aa27.49■■□□□ 1.99
VEGFA-207ENST00000413642 KCNMA1Q12791 1236 aa27.49■■□□□ 1.99
VEGFA-207ENST00000413642 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.49■■□□□ 1.99
VEGFA-207ENST00000413642 ACOX2Q99424 681 aa27.49■■□□□ 1.99
VEGFA-207ENST00000413642 EBF1Q9UH73 591 aa27.49■■□□□ 1.99
VEGFA-207ENST00000413642 CLEC4EQ9ULY5 219 aa27.49■■□□□ 1.99
VEGFA-207ENST00000413642 NFE2L3Q9Y4A8 694 aa27.49■■□□□ 1.99
VEGFA-207ENST00000413642 MED7O43513 233 aa27.48■■□□□ 1.99
VEGFA-207ENST00000413642 PENKP01210 267 aaPredicted RBP27.48■■□□□ 1.99
VEGFA-207ENST00000413642 FYNP06241 537 aa27.48■■□□□ 1.99
VEGFA-207ENST00000413642 DGKGP49619 791 aa27.48■■□□□ 1.99
VEGFA-207ENST00000413642 SPEM2Q0P670 501 aa27.48■■□□□ 1.99
VEGFA-207ENST00000413642 EGFLAMQ63HQ2 1017 aa27.48■■□□□ 1.99
VEGFA-207ENST00000413642 ZNF513Q8N8E2 541 aaPredicted RBP27.48■■□□□ 1.99
VEGFA-207ENST00000413642 SLC4A5Q9BY07 1137 aa27.48■■□□□ 1.99
VEGFA-207ENST00000413642 TAB2Q9NYJ8 693 aa27.48■■□□□ 1.99
VEGFA-207ENST00000413642 TJP2Q9UDY2 1190 aa27.48■■□□□ 1.99
VEGFA-207ENST00000413642 HBS1LQ9Y450 684 aaKnown RBP27.48■■□□□ 1.99
VEGFA-207ENST00000413642 FOXN3O00409 490 aaPredicted RBP27.47■■□□□ 1.99
VEGFA-207ENST00000413642 TSPAN3O60637 253 aa27.47■■□□□ 1.99
VEGFA-207ENST00000413642 FBXO21O94952 628 aa27.47■■□□□ 1.99
VEGFA-207ENST00000413642 RETP07949 1114 aa27.47■■□□□ 1.99
VEGFA-207ENST00000413642 CHKAP35790 457 aa27.47■■□□□ 1.99
VEGFA-207ENST00000413642 MSANTD2Q6P1R3 559 aa27.47■■□□□ 1.99
VEGFA-207ENST00000413642 RASSF3Q86WH2 238 aa27.47■■□□□ 1.99
VEGFA-207ENST00000413642 WDTC1Q8N5D0 677 aa27.47■■□□□ 1.99
VEGFA-207ENST00000413642 MDGA1Q8NFP4 955 aa27.47■■□□□ 1.99
VEGFA-207ENST00000413642 ERLEC1Q96DZ1 483 aa27.47■■□□□ 1.99
VEGFA-207ENST00000413642 FAM81BQ96LP2 452 aa27.47■■□□□ 1.99
VEGFA-207ENST00000413642 FBXO10Q9UK96 956 aa27.47■■□□□ 1.99
VEGFA-207ENST00000413642 KIAA1549LQ6ZVL6 1849 aa27.46■■□□□ 1.99
VEGFA-207ENST00000413642 PES1O00541 588 aaKnown RBP27.46■■□□□ 1.99
VEGFA-207ENST00000413642 PAPSS1O43252 624 aaPredicted RBP27.46■■□□□ 1.99
VEGFA-207ENST00000413642 PREPLQ4J6C6 727 aaPredicted RBP27.46■■□□□ 1.99
VEGFA-207ENST00000413642 TCP11X2Q5H9J9 407 aa27.46■■□□□ 1.99
VEGFA-207ENST00000413642 CT47A1Q5JQC4 288 aaPredicted RBP27.46■■□□□ 1.99
VEGFA-207ENST00000413642 EOGTQ5NDL2 527 aa27.46■■□□□ 1.99
VEGFA-207ENST00000413642 C11orf57Q6ZUT1 292 aaPredicted RBP27.46■■□□□ 1.99
VEGFA-207ENST00000413642 CACNA2D4Q7Z3S7 1137 aa27.46■■□□□ 1.99
VEGFA-207ENST00000413642 PASD1Q8IV76 773 aa27.46■■□□□ 1.99
VEGFA-207ENST00000413642 CPXM2Q8N436 756 aa27.46■■□□□ 1.99
VEGFA-207ENST00000413642 ENOX1Q8TC92 643 aaKnown RBP27.46■■□□□ 1.99
VEGFA-207ENST00000413642 USP18Q9UMW8 372 aa27.46■■□□□ 1.99
VEGFA-207ENST00000413642 NAALADL1Q9UQQ1 740 aa27.46■■□□□ 1.99
VEGFA-207ENST00000413642 E5RJQ4 531 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms