RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 MAP7Q14244 749 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 MAP7D1Q3KQU3 841 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 TNFAIP8L3Q5GJ75 292 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 SH3PXD2AQ5TCZ1 1133 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 PIGWQ7Z7B1 504 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.5□□□□□ -0.25
LITAF-203ENST00000413364 MTG1Q9BT17 334 aaPredicted RBP13.5□□□□□ -0.25
LITAF-203ENST00000413364 TMEM121Q9BTD3 319 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 SNX25Q9H3E2 840 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 NINJ2Q9NZG7 142 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 CROTQ9UKG9 612 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 TMEM247A6NEH6 219 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 EIF4E1BA6NMX2 242 aaKnown RBP13.5□□□□□ -0.25
LITAF-203ENST00000413364 FAM155AB1AL88 458 aaPredicted RBP13.5□□□□□ -0.25
LITAF-203ENST00000413364 SGK1O00141 431 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 GRAP2O75791 330 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 GABBR2O75899 941 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 ENDOD1O94919 500 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 C6orf222P0C671 652 aaPredicted RBP13.5□□□□□ -0.25
LITAF-203ENST00000413364 HOXD12P35452 270 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 GNL1P36915 607 aaPredicted RBP13.5□□□□□ -0.25
LITAF-203ENST00000413364 CD97P48960 835 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 GJA9P57773 515 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 NCALDP61601 193 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 MRPS6P82932 125 aaKnown RBP13.5□□□□□ -0.25
LITAF-203ENST00000413364 SREBF2Q12772 1141 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 AUHQ13825 339 aaKnown RBP13.5□□□□□ -0.25
LITAF-203ENST00000413364 KYNUQ16719 465 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 C15orf59Q2T9L4 293 aaPredicted RBP13.5□□□□□ -0.25
LITAF-203ENST00000413364 SV2CQ496J9 727 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 CCDC14Q49A88 953 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 RFX6Q8HWS3 928 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 ZDHHC17Q8IUH5 632 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 ARRDC4Q8NCT1 418 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 DNAJC9Q8WXX5 260 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 DNAI2Q9GZS0 605 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 NRDE2Q9H7Z3 1164 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 RSAD1Q9HA92 442 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 RNPEPL1Q9HAU8 725 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 LRCH1Q9Y2L9 728 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 PAPSS1O43252 624 aaPredicted RBP13.49□□□□□ -0.25
LITAF-203ENST00000413364 HCRTO43612 131 aa13.49□□□□□ -0.25
LITAF-203ENST00000413364 PRPSAP2O60256 369 aa13.49□□□□□ -0.25
LITAF-203ENST00000413364 SLCO1A2P46721 670 aa13.49□□□□□ -0.25
LITAF-203ENST00000413364 NEK2P51955 445 aa13.49□□□□□ -0.25
LITAF-203ENST00000413364 IFI35P80217 286 aaPredicted RBP13.49□□□□□ -0.25
LITAF-203ENST00000413364 MORF4L2Q15014 288 aa13.49□□□□□ -0.25
LITAF-203ENST00000413364 SLC44A4Q53GD3 710 aa13.49□□□□□ -0.25
LITAF-203ENST00000413364 RASIP1Q5U651 963 aa13.49□□□□□ -0.25
LITAF-203ENST00000413364 TWF2Q6IBS0 349 aaKnown RBP13.49□□□□□ -0.25
LITAF-203ENST00000413364 SLC15A3Q8IY34 581 aa13.49□□□□□ -0.25
LITAF-203ENST00000413364 ANKRD52Q8NB46 1076 aa13.49□□□□□ -0.25
LITAF-203ENST00000413364 APPL2Q8NEU8 664 aa13.49□□□□□ -0.25
LITAF-203ENST00000413364 PRCCQ92733 491 aaPredicted RBP13.49□□□□□ -0.25
LITAF-203ENST00000413364 KHSRPQ92945 711 aaKnown RBP eCLIP13.49□□□□□ -0.25
LITAF-203ENST00000413364 SERPINB12Q96P63 405 aa13.49□□□□□ -0.25
LITAF-203ENST00000413364 LPIN3Q9BQK8 851 aa13.49□□□□□ -0.25
LITAF-203ENST00000413364 CALN1Q9BXU9 219 aa13.49□□□□□ -0.25
LITAF-203ENST00000413364 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.49□□□□□ -0.25
LITAF-203ENST00000413364 SAE1Q9UBE0 346 aaPredicted RBP13.49□□□□□ -0.25
LITAF-203ENST00000413364 MAGEA13PA6NCF6 341 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 APOC4-APOC2K7ER74 178 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 TCEA3O75764 348 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 APOC2P02655 101 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 PDGFRBP09619 1106 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 CYBAP13498 195 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 BCAT1P54687 386 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 BST2Q10589 180 aaKnown RBP13.48□□□□□ -0.25
LITAF-203ENST00000413364 RAB6CQ53S08 254 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 FAM133BQ5BKY9 247 aaKnown RBP13.48□□□□□ -0.25
LITAF-203ENST00000413364 GNASQ5JWF2 1037 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 RNASEH2BQ5TBB1 312 aaKnown RBP13.48□□□□□ -0.25
LITAF-203ENST00000413364 THOC7Q6I9Y2 204 aaKnown RBP13.48□□□□□ -0.25
LITAF-203ENST00000413364 KLC3Q6P597 504 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 SCUBE3Q8IX30 993 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 FAM136AQ96C01 138 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 CFAP57Q96MR6 1250 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 CATSPER2Q96P56 530 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 RBM15Q96T37 977 aaKnown RBP eCLIP13.48□□□□□ -0.25
LITAF-203ENST00000413364 NSRP1Q9H0G5 558 aaKnown RBP13.48□□□□□ -0.25
LITAF-203ENST00000413364 RAB6CQ9H0N0 254 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 UPF3AQ9H1J1 476 aaKnown RBP13.48□□□□□ -0.25
LITAF-203ENST00000413364 ECT2Q9H8V3 914 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 GOLGA2P5Q9HBQ8 144 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 TRPV2Q9Y5S1 764 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 DCAF8L1A6NGE4 600 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 M0QZ92 97 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 IFNB1P01574 187 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 CCDC130P13994 396 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 LMO2P25791 158 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 LRPAP1P30533 357 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 SDC4P31431 198 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 STIP1P31948 543 aaKnown RBP13.48□□□□□ -0.25
LITAF-203ENST00000413364 SCNN1AP37088 669 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 MAGEA4P43358 317 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 MMP13P45452 471 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 RPL34P49207 117 aaKnown RBP13.48□□□□□ -0.25
LITAF-203ENST00000413364 CDH6P55285 790 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 BOLA3Q53S33 107 aa13.48□□□□□ -0.25
LITAF-203ENST00000413364 ERMARDQ5T6L9 678 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms