RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 VAT1Q99536 393 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 MMP19Q99542 508 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 ZNF184Q99676 751 aaPredicted RBP7.58□□□□□ -1.2
PTPN3-203ENST00000412145 ANKEF1Q9NU02 776 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 ABI2Q9NYB9 513 aaPredicted RBP7.58□□□□□ -1.2
PTPN3-203ENST00000412145 PRKCBP05771 671 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 TSHRP16473 764 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 ATP6V1B2P21281 511 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 ENPEPQ07075 957 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 ELAVL2Q12926 359 aaKnown RBP7.58□□□□□ -1.2
PTPN3-203ENST00000412145 BNIP2Q12982 314 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 Q3C1V9 767 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 C11orf63Q6NUN7 778 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 OTOAQ7RTW8 1153 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 ACTRT1Q8TDG2 376 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 PANX3Q96QZ0 392 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 PLGRKTQ9HBL7 147 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 MOV10Q9HCE1 1003 aaKnown RBP7.58□□□□□ -1.2
PTPN3-203ENST00000412145 ZNF624Q9P2J8 865 aaPredicted RBP7.58□□□□□ -1.2
PTPN3-203ENST00000412145 BTN3A3O00478 584 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 USP17L8P0C7I0 530 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 STAG3L1P0CL83 205 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 NPTX2P47972 431 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 LRRC36Q1X8D7 754 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 TDRD10Q5VZ19 366 aaKnown RBP7.58□□□□□ -1.2
PTPN3-203ENST00000412145 NKX2-3Q8TAU0 364 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 ANKRD7Q92527 254 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 ACOT9Q9Y305 439 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 USP17L10C9JJH3 530 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 RAD51BO15315 384 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 GATBO75879 557 aaKnown RBP7.58□□□□□ -1.2
PTPN3-203ENST00000412145 CHRM3P20309 590 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 EIF2S3P41091 472 aaKnown RBP7.58□□□□□ -1.2
PTPN3-203ENST00000412145 MAPK8P45983 427 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 NR1H2P55055 460 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 GRIK3Q13003 919 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 NECTIN1Q15223 517 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 ATP13A5Q4VNC0 1218 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 HLA-DQA1Q5Y7H0 255 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 TAF8Q7Z7C8 310 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 ARID3BQ8IVW6 561 aaPredicted RBP7.58□□□□□ -1.2
PTPN3-203ENST00000412145 IZUMO1Q8IYV9 350 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 LZTR1Q8N653 840 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 MYCBPAPQ8TBZ2 947 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 TRIM39Q9HCM9 518 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 PHTF1Q9UMS5 762 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 AHCYL1O43865 530 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 SERPINE1P05121 402 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 GSTM1P09488 218 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 DCKP27707 260 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 GPR1P46091 355 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 SCTRP47872 440 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 RPL10AP62906 217 aaKnown RBP7.57□□□□□ -1.2
PTPN3-203ENST00000412145 VAC14Q08AM6 782 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 TRAF2Q12933 501 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 PTPAQ15257 358 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 GRTP1Q5TC63 336 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 SNRNP48Q6IEG0 339 aaKnown RBP7.57□□□□□ -1.2
PTPN3-203ENST00000412145 DSG4Q86SJ6 1040 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 C8orf59Q8N0T1 100 aaPredicted RBP7.57□□□□□ -1.2
PTPN3-203ENST00000412145 CMTR1Q8N1G2 835 aaKnown RBP7.57□□□□□ -1.2
PTPN3-203ENST00000412145 ZNF671Q8TAW3 534 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 CAVIN3Q969G5 261 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 TP53INP1Q96A56 240 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 ERGIC2Q96RQ1 377 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 CCDC3Q9BQI4 270 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 YIPF2Q9BWQ6 316 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 CMTM6Q9NX76 183 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 PSME2Q9UL46 239 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 SLC16A4O15374 487 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 PER1O15534 1290 aaPredicted RBP7.57□□□□□ -1.2
PTPN3-203ENST00000412145 CDC40O60508 579 aaKnown RBP eCLIP7.57□□□□□ -1.2
PTPN3-203ENST00000412145 RRM1P23921 792 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 PTPN7P35236 360 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.57□□□□□ -1.2
PTPN3-203ENST00000412145 OR7A2PQ8NGA2 310 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 PIGBQ92521 554 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 PABPC5Q96DU9 382 aaKnown RBP7.57□□□□□ -1.2
PTPN3-203ENST00000412145 MASTLQ96GX5 879 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 SLC9A7Q96T83 725 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 SIK2Q9H0K1 926 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 TCF7L2Q9NQB0 619 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 DMTF1Q9Y222 760 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 A0A087X1B8 175 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 LOC102724159A0A0B4J2E5 919 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 GNG14A0A1W2PPG7 69 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 SGTAO43765 313 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 SSNA1O43805 119 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 FGRP09769 529 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 MZF1P28698 734 aaPredicted RBP7.57□□□□□ -1.2
PTPN3-203ENST00000412145 IL2P60568 153 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 AP1S1P61966 158 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 PWP2Q15269 919 aaKnown RBP7.57□□□□□ -1.2
PTPN3-203ENST00000412145 RFTN2Q52LD8 501 aaPredicted RBP7.57□□□□□ -1.2
PTPN3-203ENST00000412145 ZRANB3Q5FWF4 1079 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 TMEM63BQ5T3F8 832 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 IL31Q6EBC2 164 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 GLB1LQ6UWU2 654 aa7.57□□□□□ -1.2
PTPN3-203ENST00000412145 EIF2AK1Q9BQI3 630 aaKnown RBP7.57□□□□□ -1.2
PTPN3-203ENST00000412145 SEC31BQ9NQW1 1179 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms