RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 SLC5A9Q2M3M2 681 aa4.81□□□□□ -1.64
PMS1-203ENST00000409593 TMEM196Q5HYL7 178 aa4.81□□□□□ -1.64
PMS1-203ENST00000409593 CCSAPQ6IQ19 270 aaPredicted RBP4.81□□□□□ -1.64
PMS1-203ENST00000409593 GLIS1Q8NBF1 620 aa4.81□□□□□ -1.64
PMS1-203ENST00000409593 DENND1AQ8TEH3 1009 aa4.81□□□□□ -1.64
PMS1-203ENST00000409593 RPL36ALQ969Q0 106 aaKnown RBP4.81□□□□□ -1.64
PMS1-203ENST00000409593 EIF3CQ99613 913 aaKnown RBP4.81□□□□□ -1.64
PMS1-203ENST00000409593 ARL8BQ9NVJ2 186 aa4.81□□□□□ -1.64
PMS1-203ENST00000409593 RGL1Q9NZL6 768 aa4.81□□□□□ -1.64
PMS1-203ENST00000409593 MAFFQ9ULX9 164 aa4.81□□□□□ -1.64
PMS1-203ENST00000409593 PCDHGB2Q9Y5G2 931 aa4.81□□□□□ -1.64
PMS1-203ENST00000409593 COL3A1P02461 1466 aaPredicted RBP4.81□□□□□ -1.64
PMS1-203ENST00000409593 BCAR3O75815 825 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 FGF18O76093 207 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 VIPP01282 170 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 SRGAP2BP0DMP2 458 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 SFPQP23246 707 aaKnown RBP eCLIP4.8□□□□□ -1.64
PMS1-203ENST00000409593 EEF1GP26641 437 aaKnown RBP4.8□□□□□ -1.64
PMS1-203ENST00000409593 WDR5P61964 334 aaKnown RBP4.8□□□□□ -1.64
PMS1-203ENST00000409593 SSBP2P81877 361 aaPredicted RBP4.8□□□□□ -1.64
PMS1-203ENST00000409593 GHRHRQ02643 423 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 DNASE1L3Q13609 305 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 SEC23BQ15437 767 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 PFKFB3Q16875 520 aaPredicted RBP4.8□□□□□ -1.64
PMS1-203ENST00000409593 IZUMO3Q5VZ72 239 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 PRSS3P2Q8NHM4 247 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 CUL5Q93034 780 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 KIAA1191Q96A73 305 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 MYD88Q99836 296 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 PCGF6Q9BYE7 350 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 CYP2D7A0A087X1C5 515 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 TP73O15350 636 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 CBFA2T3O75081 653 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 ATP5F1P24539 256 aaPredicted RBP4.8□□□□□ -1.64
PMS1-203ENST00000409593 GSTM5P46439 218 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 DAZAP2Q15038 168 aaPredicted RBP4.8□□□□□ -1.64
PMS1-203ENST00000409593 Q4G0T1 1027 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 TMTC4Q5T4D3 741 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 SRLQ86TD4 932 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 KRT73Q86Y46 540 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 BRI3BPQ8WY22 251 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 MAP4K1Q92918 833 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 KAZALD1Q96I82 304 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 C1QTNF7Q9BXJ2 289 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 NUAK2Q9H093 628 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 GAR1Q9NY12 217 aaKnown RBP4.8□□□□□ -1.64
PMS1-203ENST00000409593 BTBD3Q9Y2F9 522 aa4.8□□□□□ -1.64
PMS1-203ENST00000409593 INO80B-WBP1J3KQ70 363 aa4.79□□□□□ -1.64
PMS1-203ENST00000409593 FCHO1O14526 889 aa4.79□□□□□ -1.64
PMS1-203ENST00000409593 ADAM10O14672 748 aa4.79□□□□□ -1.64
PMS1-203ENST00000409593 SLC3A2P08195 630 aaKnown RBP4.79□□□□□ -1.64
PMS1-203ENST00000409593 TACR3P29371 465 aa4.79□□□□□ -1.64
PMS1-203ENST00000409593 YPEL5P62699 121 aa4.79□□□□□ -1.64
PMS1-203ENST00000409593 NSUN2Q08J23 767 aaKnown RBP eCLIP4.79□□□□□ -1.64
PMS1-203ENST00000409593 ATP1A4Q13733 1029 aa4.79□□□□□ -1.64
PMS1-203ENST00000409593 KCNJ12Q14500 433 aa4.79□□□□□ -1.64
PMS1-203ENST00000409593 MAPKAPK3Q16644 382 aa4.79□□□□□ -1.64
PMS1-203ENST00000409593 MEX3CQ5U5Q3 659 aaKnown RBP4.79□□□□□ -1.64
PMS1-203ENST00000409593 VPS16Q9H269 839 aa4.79□□□□□ -1.64
PMS1-203ENST00000409593 TRNAU1APQ9NX07 287 aaKnown RBP4.79□□□□□ -1.64
PMS1-203ENST00000409593 FNIP2Q9P278 1114 aa4.79□□□□□ -1.64
PMS1-203ENST00000409593 PI4KBQ9UBF8 816 aa4.79□□□□□ -1.64
PMS1-203ENST00000409593 E5RJQ4 531 aa4.78□□□□□ -1.64
PMS1-203ENST00000409593 PLIN1O60240 522 aa4.78□□□□□ -1.64
PMS1-203ENST00000409593 MBPP02686 304 aaPredicted RBP4.78□□□□□ -1.64
PMS1-203ENST00000409593 ABCB4P21439 1286 aa4.78□□□□□ -1.64
PMS1-203ENST00000409593 IGHMBP2P38935 993 aaKnown RBP4.78□□□□□ -1.64
PMS1-203ENST00000409593 HSPA7P48741 367 aa4.78□□□□□ -1.64
PMS1-203ENST00000409593 ZNF91Q05481 1191 aa4.78□□□□□ -1.64
PMS1-203ENST00000409593 SEMA3BQ13214 749 aa4.78□□□□□ -1.64
PMS1-203ENST00000409593 CNGA3Q16281 694 aa4.78□□□□□ -1.64
PMS1-203ENST00000409593 MPEG1Q2M385 716 aa4.78□□□□□ -1.64
PMS1-203ENST00000409593 C1QL2Q7Z5L3 287 aa4.78□□□□□ -1.64
PMS1-203ENST00000409593 ZNF398Q8TD17 642 aa4.78□□□□□ -1.64
PMS1-203ENST00000409593 ABHD10Q9NUJ1 306 aa4.78□□□□□ -1.64
PMS1-203ENST00000409593 HEMK1Q9Y5R4 338 aaPredicted RBP4.78□□□□□ -1.64
PMS1-203ENST00000409593 J3KTA2 159 aa4.77□□□□□ -1.65
PMS1-203ENST00000409593 TOP3BO95985 862 aaKnown RBP4.77□□□□□ -1.65
PMS1-203ENST00000409593 IFIT2P09913 472 aaKnown RBP4.77□□□□□ -1.65
PMS1-203ENST00000409593 ALADP13716 330 aa4.77□□□□□ -1.65
PMS1-203ENST00000409593 VPS41P49754 854 aa4.77□□□□□ -1.65
PMS1-203ENST00000409593 TRIP6Q15654 476 aaKnown RBP4.77□□□□□ -1.65
PMS1-203ENST00000409593 FAM90A2PQ658T7 463 aa4.77□□□□□ -1.65
PMS1-203ENST00000409593 ZNF425Q6IV72 752 aa4.77□□□□□ -1.65
PMS1-203ENST00000409593 ANO7Q6IWH7 933 aa4.77□□□□□ -1.65
PMS1-203ENST00000409593 CCDC144NLQ6NUI1 221 aa4.77□□□□□ -1.65
PMS1-203ENST00000409593 TLDC1Q6P9B6 456 aa4.77□□□□□ -1.65
PMS1-203ENST00000409593 KRT27Q7Z3Y8 459 aa4.77□□□□□ -1.65
PMS1-203ENST00000409593 RASGRP3Q8IV61 690 aa4.77□□□□□ -1.65
PMS1-203ENST00000409593 CCDC146Q8IYE0 955 aa4.77□□□□□ -1.65
PMS1-203ENST00000409593 FAM186BQ8IYM0 893 aa4.77□□□□□ -1.65
PMS1-203ENST00000409593 CLASRPQ8N2M8 674 aaKnown RBP4.77□□□□□ -1.65
PMS1-203ENST00000409593 SGCZQ96LD1 299 aa4.77□□□□□ -1.65
PMS1-203ENST00000409593 GDF15Q99988 308 aa4.77□□□□□ -1.65
PMS1-203ENST00000409593 SPRTNQ9H040 489 aaPredicted RBP4.77□□□□□ -1.65
PMS1-203ENST00000409593 TUBA8Q9NY65 449 aaPredicted RBP4.77□□□□□ -1.65
PMS1-203ENST00000409593 OR2W5A6NFC9 320 aa4.77□□□□□ -1.65
PMS1-203ENST00000409593 HMGB1P09429 215 aaKnown RBP4.77□□□□□ -1.65
PMS1-203ENST00000409593 RABEP1Q15276 862 aa4.77□□□□□ -1.65
PMS1-203ENST00000409593 ELF2Q15723 593 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms