RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 PPFIA2O75334 1257 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 VNN2O95498 520 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 HSPA1AP0DMV8 641 aaKnown RBP26.63■■□□□ 1.85
CPNE1-205ENST00000401607 HSPA1BP0DMV9 641 aaKnown RBP26.63■■□□□ 1.85
CPNE1-205ENST00000401607 CPB1P15086 417 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 RAG1P15918 1043 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 HSD17B3P37058 310 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 DHX9Q08211 1270 aaKnown RBP26.63■■□□□ 1.85
CPNE1-205ENST00000401607 GPR17Q13304 367 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 ALS2CLQ60I27 953 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 MFSD5Q6N075 450 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 C1orf228Q6PIY5 440 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 PRSS55Q6UWB4 352 aaPredicted RBP26.63■■□□□ 1.85
CPNE1-205ENST00000401607 STKLD1Q8NE28 680 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 NTAN1Q96AB6 310 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 ANLNQ9NQW6 1124 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 DDIT4Q9NX09 232 aa26.63■■□□□ 1.85
CPNE1-205ENST00000401607 MTRF1LQ9UGC7 380 aaKnown RBP26.63■■□□□ 1.85
CPNE1-205ENST00000401607 MTMR11A4FU01 709 aa26.62■■□□□ 1.85
CPNE1-205ENST00000401607 SGK1O00141 431 aa26.62■■□□□ 1.85
CPNE1-205ENST00000401607 AMHP03971 560 aa26.62■■□□□ 1.85
CPNE1-205ENST00000401607 RBP3P10745 1247 aa26.62■■□□□ 1.85
CPNE1-205ENST00000401607 GGCXP38435 758 aa26.62■■□□□ 1.85
CPNE1-205ENST00000401607 PGFP49763 221 aa26.62■■□□□ 1.85
CPNE1-205ENST00000401607 ITGA8P53708 1063 aa26.62■■□□□ 1.85
CPNE1-205ENST00000401607 GDF10P55107 478 aa26.62■■□□□ 1.85
CPNE1-205ENST00000401607 YWHAGP61981 247 aaKnown RBP eCLIP26.62■■□□□ 1.85
CPNE1-205ENST00000401607 GPS2Q13227 327 aa26.62■■□□□ 1.85
CPNE1-205ENST00000401607 TAC4Q86UU9 113 aa26.62■■□□□ 1.85
CPNE1-205ENST00000401607 CCHCR1Q8TD31 782 aa26.62■■□□□ 1.85
CPNE1-205ENST00000401607 IGSF21Q96ID5 467 aa26.62■■□□□ 1.85
CPNE1-205ENST00000401607 ZIM3Q96PE6 472 aa26.62■■□□□ 1.85
CPNE1-205ENST00000401607 TMEM106CQ9BVX2 250 aa26.62■■□□□ 1.85
CPNE1-205ENST00000401607 FAM204AQ9H8W3 233 aa26.62■■□□□ 1.85
CPNE1-205ENST00000401607 MYO16Q9Y6X6 1858 aa26.62■■□□□ 1.85
CPNE1-205ENST00000401607 I6L893 689 aaPredicted RBP26.61■■□□□ 1.85
CPNE1-205ENST00000401607 SYF2O95926 243 aaKnown RBP26.61■■□□□ 1.85
CPNE1-205ENST00000401607 GOT1P17174 413 aa26.61■■□□□ 1.85
CPNE1-205ENST00000401607 OAS2P29728 719 aaKnown RBP26.61■■□□□ 1.85
CPNE1-205ENST00000401607 WDR5P61964 334 aaKnown RBP26.61■■□□□ 1.85
CPNE1-205ENST00000401607 CBX1P83916 185 aa26.61■■□□□ 1.85
CPNE1-205ENST00000401607 CFAP58Q5T655 872 aa26.61■■□□□ 1.85
CPNE1-205ENST00000401607 SCD5Q86SK9 330 aa26.61■■□□□ 1.85
CPNE1-205ENST00000401607 NUP93Q8N1F7 819 aa26.61■■□□□ 1.85
CPNE1-205ENST00000401607 DQX1Q8TE96 717 aaKnown RBP26.61■■□□□ 1.85
CPNE1-205ENST00000401607 TRIM62Q9BVG3 475 aa26.61■■□□□ 1.85
CPNE1-205ENST00000401607 CRISPLD1Q9H336 500 aa26.61■■□□□ 1.85
CPNE1-205ENST00000401607 PCDH9Q9HC56 1237 aa26.61■■□□□ 1.85
CPNE1-205ENST00000401607 RCOR3Q9P2K3 495 aaPredicted RBP26.61■■□□□ 1.85
CPNE1-205ENST00000401607 IGLV3-25P01717 112 aa26.61■■□□□ 1.85
CPNE1-205ENST00000401607 ACRP10323 421 aa26.61■■□□□ 1.85
CPNE1-205ENST00000401607 ADRA1BP35368 520 aa26.61■■□□□ 1.85
CPNE1-205ENST00000401607 AIF1P55008 147 aa26.61■■□□□ 1.85
CPNE1-205ENST00000401607 FAM193AP78312 1265 aa26.61■■□□□ 1.85
CPNE1-205ENST00000401607 SCAPQ12770 1279 aa26.61■■□□□ 1.85
CPNE1-205ENST00000401607 FAM117BQ6P1L5 589 aa26.61■■□□□ 1.85
CPNE1-205ENST00000401607 RNF19BQ6ZMZ0 732 aa26.61■■□□□ 1.85
CPNE1-205ENST00000401607 OXCT2Q9BYC2 517 aaPredicted RBP26.61■■□□□ 1.85
CPNE1-205ENST00000401607 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.61■■□□□ 1.85
CPNE1-205ENST00000401607 FBXW11Q9UKB1 542 aa26.61■■□□□ 1.85
CPNE1-205ENST00000401607 PLXNA3P51805 1871 aa26.61■■□□□ 1.85
CPNE1-205ENST00000401607 F9P00740 461 aa26.6■■□□□ 1.85
CPNE1-205ENST00000401607 P3H1Q32P28 736 aa26.6■■□□□ 1.85
CPNE1-205ENST00000401607 EFHC2Q5JST6 749 aa26.6■■□□□ 1.85
CPNE1-205ENST00000401607 IZUMO3Q5VZ72 239 aa26.6■■□□□ 1.85
CPNE1-205ENST00000401607 KCNT2Q6UVM3 1135 aa26.6■■□□□ 1.85
CPNE1-205ENST00000401607 UNC45BQ8IWX7 931 aa26.6■■□□□ 1.85
CPNE1-205ENST00000401607 TMEM199Q8N511 208 aa26.6■■□□□ 1.85
CPNE1-205ENST00000401607 SPPL2BQ8TCT7 592 aa26.6■■□□□ 1.85
CPNE1-205ENST00000401607 RIN2Q8WYP3 895 aaPredicted RBP26.6■■□□□ 1.85
CPNE1-205ENST00000401607 NMUR1Q9HB89 426 aa26.6■■□□□ 1.85
CPNE1-205ENST00000401607 ABCC13Q9NSE7 274 aa26.6■■□□□ 1.85
CPNE1-205ENST00000401607 SCML2Q9UQR0 700 aa26.6■■□□□ 1.85
CPNE1-205ENST00000401607 ATP8A1Q9Y2Q0 1164 aa26.6■■□□□ 1.85
CPNE1-205ENST00000401607 IFNB1P01574 187 aa26.59■■□□□ 1.85
CPNE1-205ENST00000401607 ARL4AP40617 200 aa26.59■■□□□ 1.85
CPNE1-205ENST00000401607 CXCR3P49682 368 aa26.59■■□□□ 1.85
CPNE1-205ENST00000401607 USP41Q3LFD5 358 aa26.59■■□□□ 1.85
CPNE1-205ENST00000401607 ZC3H18Q86VM9 953 aaKnown RBP26.59■■□□□ 1.85
CPNE1-205ENST00000401607 BBOF1Q8ND07 529 aa26.59■■□□□ 1.85
CPNE1-205ENST00000401607 RNF139Q8WU17 664 aa26.59■■□□□ 1.85
CPNE1-205ENST00000401607 AAASQ9NRG9 546 aa26.59■■□□□ 1.85
CPNE1-205ENST00000401607 MTRRQ9UBK8 725 aa26.59■■□□□ 1.85
CPNE1-205ENST00000401607 ANAPC5Q9UJX4 755 aa26.59■■□□□ 1.85
CPNE1-205ENST00000401607 HEY1Q9Y5J3 304 aa26.59■■□□□ 1.85
CPNE1-205ENST00000401607 DNALI1O14645 258 aaPredicted RBP26.58■■□□□ 1.85
CPNE1-205ENST00000401607 ADAM12O43184 909 aa26.58■■□□□ 1.85
CPNE1-205ENST00000401607 SOAT2O75908 522 aa26.58■■□□□ 1.85
CPNE1-205ENST00000401607 CAPN2P17655 700 aa26.58■■□□□ 1.85
CPNE1-205ENST00000401607 AMPD1P23109 780 aa26.58■■□□□ 1.85
CPNE1-205ENST00000401607 USP46P62068 366 aa26.58■■□□□ 1.85
CPNE1-205ENST00000401607 ROR1Q01973 937 aa26.58■■□□□ 1.85
CPNE1-205ENST00000401607 CAV1Q03135 178 aa26.58■■□□□ 1.85
CPNE1-205ENST00000401607 SMARCB1Q12824 385 aa26.58■■□□□ 1.85
CPNE1-205ENST00000401607 EIF4EBP2Q13542 120 aaPredicted RBP26.58■■□□□ 1.85
CPNE1-205ENST00000401607 MTMR3Q13615 1198 aa26.58■■□□□ 1.85
CPNE1-205ENST00000401607 BTBD8Q5XKL5 378 aa26.58■■□□□ 1.85
CPNE1-205ENST00000401607 NCBP2-AS2Q69YL0 99 aa26.58■■□□□ 1.85
CPNE1-205ENST00000401607 B4GALNT4Q76KP1 1039 aa26.58■■□□□ 1.85
CPNE1-205ENST00000401607 RSAD2Q8WXG1 361 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms