RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 CCNG2Q16589 344 aa10.5□□□□□ -0.73
HMGCLL1-205ENST00000398661 CCDC142Q17RM4 750 aa10.5□□□□□ -0.73
HMGCLL1-205ENST00000398661 EFHC2Q5JST6 749 aa10.5□□□□□ -0.73
HMGCLL1-205ENST00000398661 GNASQ5JWF2 1037 aa10.5□□□□□ -0.73
HMGCLL1-205ENST00000398661 GRAMD4Q6IC98 578 aa10.5□□□□□ -0.73
HMGCLL1-205ENST00000398661 EFCAB12Q6NXP0 572 aa10.5□□□□□ -0.73
HMGCLL1-205ENST00000398661 CCDC80Q76M96 950 aa10.5□□□□□ -0.73
HMGCLL1-205ENST00000398661 GSTA5Q7RTV2 222 aa10.5□□□□□ -0.73
HMGCLL1-205ENST00000398661 TMC7Q7Z402 723 aa10.5□□□□□ -0.73
HMGCLL1-205ENST00000398661 MARVELD2Q8N4S9 558 aa10.5□□□□□ -0.73
HMGCLL1-205ENST00000398661 RNF149Q8NC42 400 aa10.5□□□□□ -0.73
HMGCLL1-205ENST00000398661 TMEM161BQ8NDZ6 487 aa10.5□□□□□ -0.73
HMGCLL1-205ENST00000398661 LMO3Q8TAP4 145 aa10.5□□□□□ -0.73
HMGCLL1-205ENST00000398661 SHKBP1Q8TBC3 707 aa10.5□□□□□ -0.73
HMGCLL1-205ENST00000398661 MPHOSPH6Q99547 160 aaKnown RBP10.5□□□□□ -0.73
HMGCLL1-205ENST00000398661 MKNK1Q9BUB5 465 aa10.5□□□□□ -0.73
HMGCLL1-205ENST00000398661 VTA1Q9NP79 307 aa10.5□□□□□ -0.73
HMGCLL1-205ENST00000398661 KMT5AQ9NQR1 393 aa10.5□□□□□ -0.73
HMGCLL1-205ENST00000398661 PLK2Q9NYY3 685 aa10.5□□□□□ -0.73
HMGCLL1-205ENST00000398661 ZNF180Q9UJW8 692 aa10.5□□□□□ -0.73
HMGCLL1-205ENST00000398661 GTF3C4Q9UKN8 822 aa10.5□□□□□ -0.73
HMGCLL1-205ENST00000398661 POLIQ9UNA4 740 aa10.5□□□□□ -0.73
HMGCLL1-205ENST00000398661 REV3LO60673 3130 aa10.5□□□□□ -0.73
HMGCLL1-205ENST00000398661 A0A088AWK7 358 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 DNALI1O14645 258 aaPredicted RBP10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 BGNP21810 368 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 DMP1Q13316 513 aaPredicted RBP10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 TRIP10Q15642 601 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 NFIL3Q16649 462 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 CHSY1Q86X52 802 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 ARHGEF19Q8IW93 802 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 SLC26A7Q8TE54 656 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 KLF6Q99612 283 aaPredicted RBP10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 APBA2Q99767 749 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 HEMGNQ9BXL5 484 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 SENP6Q9GZR1 1112 aaPredicted RBP10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 CDHR5Q9HBB8 845 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 PDLIM7Q9NR12 457 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 FAF1Q9UNN5 650 aaPredicted RBP10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 GNEQ9Y223 722 aaKnown RBP10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 ALOX15BO15296 676 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 DENRO43583 198 aaKnown RBP10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 PEX1O43933 1283 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 LYPLA2O95372 231 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 IL1BP01584 269 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 STIP1P31948 543 aaKnown RBP10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 NCKAP1LP55160 1127 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 WNT7BP56706 349 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 CAPSQ13938 189 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 TLR1Q15399 786 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 SLC39A4Q6P5W5 647 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 BORAQ6PGQ7 559 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 CENPUQ71F23 418 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 ZBTB33Q86T24 672 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 PATL1Q86TB9 770 aaKnown RBP10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 PRPF39Q86UA1 669 aaKnown RBP10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 CROCCP3Q8IVE0 287 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 RIN3Q8TB24 985 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 VTI1AQ96AJ9 217 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 CCDC127Q96BQ5 260 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 ALKBH8Q96BT7 664 aaKnown RBP10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 GCNAQ96QF7 691 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 C1orf21Q9H246 121 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 DHX33Q9H6R0 707 aaKnown RBP10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 KCNK4Q9NYG8 393 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 NOCTQ9UK39 431 aaKnown RBP10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 STK24Q9Y6E0 443 aa10.49□□□□□ -0.73
HMGCLL1-205ENST00000398661 ARHGAP42A6NI28 874 aa10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 GPR25O00155 361 aa10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 HNRNPDLO14979 420 aaKnown RBP10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 ADCY3O60266 1144 aa10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 DGAT1O75907 488 aa10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 DHRS4L1P0CG22 281 aa10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 RALAP11233 206 aa10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 ATP6V1B1P15313 513 aa10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 PMLP29590 882 aa10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 FDFT1P37268 417 aa10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 ACOT2P49753 483 aa10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 IRX4P78413 519 aa10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 KLF1Q13351 362 aaPredicted RBP10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 LAMC2Q13753 1193 aa10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 CCNIQ14094 377 aa10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 EFTUD2Q15029 972 aaKnown RBP eCLIP10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 TARBP2Q15633 366 aaKnown RBP10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 KIZQ2M2Z5 673 aa10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 ISLR2Q6UXK2 745 aa10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 CBWD2Q8IUF1 395 aa10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 PPTC7Q8NI37 304 aa10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 DQX1Q8TE96 717 aaKnown RBP10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 MZB1Q8WU39 189 aa10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 TTC17Q96AE7 1141 aa10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 TARS2Q9BW92 718 aaKnown RBP10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 HAPLN2Q9GZV7 340 aa10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 OLFML3Q9NRN5 406 aa10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 AGPAT3Q9NRZ7 376 aa10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 TOPORSQ9NS56 1045 aaPredicted RBP10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 ANKEF1Q9NU02 776 aa10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 UBAP1Q9NZ09 502 aa10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 THEGQ9P2T0 379 aa10.48□□□□□ -0.73
HMGCLL1-205ENST00000398661 RABGEF1Q9UJ41 708 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms