RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 KRT82Q9NSB4 513 aa10.9□□□□□ -0.66
NEDD8-202ENST00000396828 FAM49BQ9NUQ9 324 aa10.9□□□□□ -0.66
NEDD8-202ENST00000396828 EHD2Q9NZN4 543 aa10.9□□□□□ -0.66
NEDD8-202ENST00000396828 RALYQ9UKM9 306 aaKnown RBP10.9□□□□□ -0.66
NEDD8-202ENST00000396828 ADAMTS9Q9P2N4 1935 aa10.9□□□□□ -0.67
NEDD8-202ENST00000396828 ATXN2Q99700 1313 aaKnown RBP10.89□□□□□ -0.67
NEDD8-202ENST00000396828 E2F8A0AVK6 867 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 SLC9A3R1O14745 358 aaPredicted RBP10.89□□□□□ -0.67
NEDD8-202ENST00000396828 TULP3O75386 442 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 AP1G2O75843 785 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 RTN3O95197 1032 aaPredicted RBP10.89□□□□□ -0.67
NEDD8-202ENST00000396828 AFPP02771 609 aaKnown RBP10.89□□□□□ -0.67
NEDD8-202ENST00000396828 APODP05090 189 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 SPINK2P20155 84 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 EIF2DP41214 584 aaKnown RBP10.89□□□□□ -0.67
NEDD8-202ENST00000396828 P2RY2P41231 377 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 GRIA2P42262 883 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 WASP42768 502 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 ASPAP45381 313 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 MAP3K7CLP57077 242 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 CETN1Q12798 172 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 KCNH2Q12809 1159 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 ZACNQ401N2 412 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 MIIPQ5JXC2 388 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 SPECC1LQ69YQ0 1117 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 SV2AQ7L0J3 742 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 VSTM4Q8IW00 320 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 KIAA1958Q8N8K9 716 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 TMC2Q8TDI7 906 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 HMGB4Q8WW32 186 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 OVCA2Q8WZ82 227 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 PIGKQ92643 395 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 SLC35C1Q96A29 364 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 SMARCD1Q96GM5 515 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 PCMTD1Q96MG8 357 aaPredicted RBP10.89□□□□□ -0.67
NEDD8-202ENST00000396828 ACOX2Q99424 681 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 APOBEC3GQ9HC16 384 aaKnown RBP10.89□□□□□ -0.67
NEDD8-202ENST00000396828 DMAP1Q9NPF5 467 aaPredicted RBP10.89□□□□□ -0.67
NEDD8-202ENST00000396828 CD93Q9NPY3 652 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 NUDT5Q9UKK9 219 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 ANGPTL2Q9UKU9 493 aa10.89□□□□□ -0.67
NEDD8-202ENST00000396828 ASCC3Q8N3C0 2202 aaKnown RBP10.89□□□□□ -0.67
NEDD8-202ENST00000396828 CELSR3Q9NYQ7 3312 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 CEP192Q8TEP8 1941 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 PLXND1Q9Y4D7 1925 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 A0A1W2PQC6 194 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 TCRBV21S2A2A0A5A6 115 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 TBC1D3BA6NDS4 549 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 HHLA1C9JL84 531 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 KHNYNO15037 678 aaKnown RBP10.88□□□□□ -0.67
NEDD8-202ENST00000396828 MDM4O15151 490 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 CYP26A1O43174 497 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 CLSTN1O94985 981 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 ADH1CP00326 375 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 TPM1P09493 284 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 ADORA2BP29275 332 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 DEKP35659 375 aaKnown RBP10.88□□□□□ -0.67
NEDD8-202ENST00000396828 TNFRSF4P43489 277 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 NOVA1P51513 510 aaKnown RBP10.88□□□□□ -0.67
NEDD8-202ENST00000396828 SHC2P98077 582 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 GAD2Q05329 585 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 ANO4Q32M45 955 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 SH3PXD2AQ5TCZ1 1133 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 TOGARAM2Q6ZUX3 1019 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 CYP2U1Q7Z449 544 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 CRYBG2Q8N1P7 616 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 PDZD8Q8NEN9 1154 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 JAKMIP2Q96AA8 810 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 TNIP3Q96KP6 325 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 PPP1R9BQ96SB3 815 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 KLF16Q9BXK1 252 aaPredicted RBP10.88□□□□□ -0.67
NEDD8-202ENST00000396828 NMUR1Q9HB89 426 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 CSNK1G1Q9HCP0 422 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 CD248Q9HCU0 757 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 SPHK2Q9NRA0 654 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 TBC1D14Q9P2M4 693 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 IMPACTQ9P2X3 320 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 WASF3Q9UPY6 502 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 SH3BP1Q9Y3L3 701 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.88□□□□□ -0.673e-9■■□□□ 11.5
NEDD8-202ENST00000396828 PI4KAP42356 2102 aa10.88□□□□□ -0.67
NEDD8-202ENST00000396828 ITIH6Q6UXX5 1313 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 ITPR1Q14643 2758 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 A0A1W2PQF6 199 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 C1QTNF9BB2RNN3 333 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 PRRT4C9JH25 899 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 P4HA2O15460 535 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 TEX33O43247 280 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 HOXC11O43248 304 aaPredicted RBP10.87□□□□□ -0.67
NEDD8-202ENST00000396828 TLR5O60602 858 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 ASS1P00966 412 aaKnown RBP10.87□□□□□ -0.67
NEDD8-202ENST00000396828 HLA-DRAP01903 254 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 PTMAP06454 111 aaKnown RBP10.87□□□□□ -0.67
NEDD8-202ENST00000396828 C1QTNF9P0C862 333 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 TRIM49P0CI25 452 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 TRIM49CP0CI26 452 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 GABRG2P18507 467 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 ITPKAP23677 461 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 GTF2H1P32780 548 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 FMO5P49326 533 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms