RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 MKS1Q9NXB0 559 aa16.57■□□□□ 0.24
CCHCR1-202ENST00000396263 TRIP11Q15643 1979 aa16.57■□□□□ 0.24
CCHCR1-202ENST00000396263 SCN1AP35498 2009 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 ASB14A6NK59 587 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 TSPAN1O60635 241 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 CCDC22O60826 627 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 VTNP04004 478 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 TPBGLP0DKB5 382 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 GNAT1P11488 350 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 NEFHP12036 1026 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 CCNFP41002 786 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 GCLCP48506 637 aaPredicted RBP16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 PAPOLAP51003 745 aaKnown RBP16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 TAF11Q15544 211 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 CA9Q16790 459 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 LGSNQ5TDP6 509 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 SPRYD7Q5W111 196 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 CWF19L1Q69YN2 538 aaKnown RBP16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 TRIM68Q6AZZ1 485 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 SESTD1Q86VW0 696 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 CTAGE3PQ8IX95 158 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 MIPEPQ99797 713 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 TMEM120AQ9BXJ8 343 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 COL1A2P08123 1366 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 SLC15A5A6NIM6 579 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 CXorf49A8MYA2 514 aaPredicted RBP16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 APOEP02649 317 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 APRTP07741 180 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 DESP17661 470 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 KRT72Q14CN4 511 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 SLC5A9Q2M3M2 681 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 ARMC3Q5W041 872 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 CDHR3Q6ZTQ4 885 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 CDKL3Q8IVW4 592 aaPredicted RBP16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 SLC35F5Q8WV83 523 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 KIF12Q96FN5 646 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 NAF1Q96HR8 494 aaKnown RBP16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 IQCGQ9H095 443 aaKnown RBP16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 DENND2DQ9H6A0 471 aaPredicted RBP16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 PIDD1Q9HB75 910 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 PAPOLBQ9NRJ5 636 aaKnown RBP16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 SH3BP1Q9Y3L3 701 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 PLXNB2O15031 1838 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 RALGAPA2Q2PPJ7 1873 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 KAT6AQ92794 2004 aa16.56■□□□□ 0.24
CCHCR1-202ENST00000396263 LUC7L3O95232 432 aaKnown RBP16.55■□□□□ 0.24
CCHCR1-202ENST00000396263 SERPINB3P29508 390 aa16.55■□□□□ 0.24
CCHCR1-202ENST00000396263 HDAC4P56524 1084 aa16.55■□□□□ 0.24
CCHCR1-202ENST00000396263 FAXCQ5TGI0 409 aa16.55■□□□□ 0.24
CCHCR1-202ENST00000396263 FAM91A1Q658Y4 838 aa16.55■□□□□ 0.24
CCHCR1-202ENST00000396263 ZDHHC17Q8IUH5 632 aa16.55■□□□□ 0.24
CCHCR1-202ENST00000396263 NSL1Q96IY1 281 aa16.55■□□□□ 0.24
CCHCR1-202ENST00000396263 NUDCD1Q96RS6 583 aa16.55■□□□□ 0.24
CCHCR1-202ENST00000396263 BTBD10Q9BSF8 475 aa16.55■□□□□ 0.24
CCHCR1-202ENST00000396263 NRDE2Q9H7Z3 1164 aa16.55■□□□□ 0.24
CCHCR1-202ENST00000396263 ARL8BQ9NVJ2 186 aa16.55■□□□□ 0.24
CCHCR1-202ENST00000396263 PLLPQ9Y342 182 aa16.55■□□□□ 0.24
CCHCR1-202ENST00000396263 PAPSS1O43252 624 aaPredicted RBP16.55■□□□□ 0.24
CCHCR1-202ENST00000396263 GRM5P41594 1212 aa16.55■□□□□ 0.24
CCHCR1-202ENST00000396263 SNX16P57768 344 aa16.55■□□□□ 0.24
CCHCR1-202ENST00000396263 TRIM42Q8IWZ5 723 aa16.55■□□□□ 0.24
CCHCR1-202ENST00000396263 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.55■□□□□ 0.24
CCHCR1-202ENST00000396263 CCDC110Q8TBZ0 833 aa16.55■□□□□ 0.24
CCHCR1-202ENST00000396263 ITFG2Q969R8 447 aa16.55■□□□□ 0.24
CCHCR1-202ENST00000396263 MTBPQ96DY7 904 aa16.55■□□□□ 0.24
CCHCR1-202ENST00000396263 TSC22D3Q99576 134 aa16.55■□□□□ 0.24
CCHCR1-202ENST00000396263 PTPN18Q99952 460 aa16.55■□□□□ 0.24
CCHCR1-202ENST00000396263 MRPL45Q9BRJ2 306 aaKnown RBP16.55■□□□□ 0.24
CCHCR1-202ENST00000396263 CADM1Q9BY67 442 aaKnown RBP16.55■□□□□ 0.24
CCHCR1-202ENST00000396263 GCATO75600 419 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 RFPL1O75677 317 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 TOMM70O94826 608 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 LMNAP02545 664 aaKnown RBP16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 TPSB2P20231 275 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 MRPS5P82675 430 aaKnown RBP16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 TPSAB1Q15661 275 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 DPYSL2Q16555 572 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 FAM182AQ5T1J6 154 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 UNC5AQ6ZN44 842 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 ARMCX2Q7L311 632 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 SCUBE3Q8IX30 993 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 CFAP61Q8NHU2 1237 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 NLRP7Q8WX94 980 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 C7orf26Q96N11 449 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 C11orf84Q9BUA3 381 aaPredicted RBP16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 SMYD2Q9NRG4 433 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 LRRC42Q9Y546 428 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 GABBR2O75899 941 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 KRT38O76015 456 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 RTN3O95197 1032 aaPredicted RBP16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 CYP2F1P24903 491 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 PTPN9P43378 593 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 ZBTB16Q05516 673 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 ANO7Q6IWH7 933 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 MTHFD1LQ6UB35 978 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 C4orf50Q6ZRC1 276 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 ZNF534Q76KX8 674 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 ANKRD23Q86SG2 305 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 ACOT1Q86TX2 421 aa16.54■□□□□ 0.24
CCHCR1-202ENST00000396263 VPS52Q8N1B4 723 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms