RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 PPP1R7Q15435 360 aa15.75■□□□□ 0.11
SCAF11-204ENST00000395454 OASLQ15646 514 aaKnown RBP15.75■□□□□ 0.11
SCAF11-204ENST00000395454 OR6B2Q6IFH4 312 aa15.75■□□□□ 0.11
SCAF11-204ENST00000395454 FAM171BQ6P995 826 aa15.75■□□□□ 0.11
SCAF11-204ENST00000395454 SLC35B2Q8TB61 432 aa15.75■□□□□ 0.11
SCAF11-204ENST00000395454 SLC2A14Q8TDB8 520 aa15.75■□□□□ 0.11
SCAF11-204ENST00000395454 RXFP2Q8WXD0 754 aa15.75■□□□□ 0.11
SCAF11-204ENST00000395454 MYLPFQ96A32 169 aa15.75■□□□□ 0.11
SCAF11-204ENST00000395454 MRPL38Q96DV4 380 aaKnown RBP15.75■□□□□ 0.11
SCAF11-204ENST00000395454 PKMYT1Q99640 499 aa15.75■□□□□ 0.11
SCAF11-204ENST00000395454 EPB41L4BQ9H329 900 aa15.75■□□□□ 0.11
SCAF11-204ENST00000395454 ABI2Q9NYB9 513 aaPredicted RBP15.75■□□□□ 0.11
SCAF11-204ENST00000395454 VPS18Q9P253 973 aa15.75■□□□□ 0.11
SCAF11-204ENST00000395454 USP18Q9UMW8 372 aa15.75■□□□□ 0.11
SCAF11-204ENST00000395454 ATG2AQ2TAZ0 1938 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 XPO1O14980 1071 aaKnown RBP15.74■□□□□ 0.11
SCAF11-204ENST00000395454 NUDT17P0C025 328 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 KRT10P13645 584 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 PDGFRAP16234 1089 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 CAV1Q03135 178 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 GPR17Q13304 367 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 SNX1Q13596 522 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 LLGL1Q15334 1064 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 CCDC14Q49A88 953 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 RNF19BQ6ZMZ0 732 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 RBM23Q86U06 439 aaKnown RBP15.74■□□□□ 0.11
SCAF11-204ENST00000395454 FUKQ8N0W3 1084 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 TEKT4Q8WW24 435 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 KLHL5Q96PQ7 755 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 PEBP4Q96S96 227 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 RUFY1Q96T51 708 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 MED10Q9BTT4 135 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 MTRF1LQ9UGC7 380 aaKnown RBP15.74■□□□□ 0.11
SCAF11-204ENST00000395454 C5orf42Q9H799 3197 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 PRRC2BQ5JSZ5 2229 aaKnown RBP15.74■□□□□ 0.11
SCAF11-204ENST00000395454 ZNF487B1APH4 448 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 CLDN5O00501 218 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 PER2O15055 1255 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 ITGAVP06756 1048 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 ADORA2BP29275 332 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 RGS7P49802 495 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 ADCY1Q08828 1119 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 NFE2Q16621 373 aaPredicted RBP15.74■□□□□ 0.11
SCAF11-204ENST00000395454 HABP4Q5JVS0 413 aaKnown RBP15.74■□□□□ 0.11
SCAF11-204ENST00000395454 EMC10Q5UCC4 262 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 C4orf50Q6ZRC1 276 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 ADGRD2Q7Z7M1 963 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 SPATA2LQ8IUW3 424 aaPredicted RBP15.74■□□□□ 0.11
SCAF11-204ENST00000395454 GOLGA6L1Q8N7Z2 621 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 CCDC89Q8N998 374 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 ATAD1Q8NBU5 361 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 ZNF461Q8TAF7 563 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 CCHCR1Q8TD31 782 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 KCTD13Q8WZ19 329 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 CENPIQ92674 756 aaPredicted RBP15.74■□□□□ 0.11
SCAF11-204ENST00000395454 SNF8Q96H20 258 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 TBCBQ99426 244 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 PABPC3Q9H361 631 aaKnown RBP15.74■□□□□ 0.11
SCAF11-204ENST00000395454 PLAAQ9Y263 795 aa15.74■□□□□ 0.11
SCAF11-204ENST00000395454 VCPP55072 806 aaKnown RBP15.73■□□□□ 0.11
SCAF11-204ENST00000395454 BYSLQ13895 437 aaKnown RBP15.73■□□□□ 0.11
SCAF11-204ENST00000395454 RAB33AQ14088 237 aa15.73■□□□□ 0.11
SCAF11-204ENST00000395454 KCTD19Q17RG1 926 aaPredicted RBP15.73■□□□□ 0.11
SCAF11-204ENST00000395454 TTMPQ5BVD1 217 aa15.73■□□□□ 0.11
SCAF11-204ENST00000395454 PAQR9Q6ZVX9 377 aa15.73■□□□□ 0.11
SCAF11-204ENST00000395454 TTC13Q8NBP0 860 aa15.73■□□□□ 0.11
SCAF11-204ENST00000395454 DUSP16Q9BY84 665 aa15.73■□□□□ 0.11
SCAF11-204ENST00000395454 B3GNT5Q9BYG0 378 aa15.73■□□□□ 0.11
SCAF11-204ENST00000395454 RHOBTB2Q9BYZ6 727 aa15.73■□□□□ 0.11
SCAF11-204ENST00000395454 FAM204AQ9H8W3 233 aa15.73■□□□□ 0.11
SCAF11-204ENST00000395454 MTMR11A4FU01 709 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 TGM5O43548 720 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 KRT14P02533 472 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 RARGP13631 454 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 BDNFP23560 247 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 ZNF844Q08AG5 666 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 CALCOCO2Q13137 446 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 SLMAPQ14BN4 828 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 ODF2Q5BJF6 829 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 SCUBE3Q8IX30 993 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 ALLCQ8N6M5 410 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 BBOF1Q8ND07 529 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 ACSF2Q96CM8 615 aaPredicted RBP15.72■□□□□ 0.11
SCAF11-204ENST00000395454 TSPYL1Q9H0U9 437 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 TLE6Q9H808 572 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 DNPEPQ9ULA0 475 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 PCDHB5Q9Y5E4 795 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 PTPRDP23468 1912 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 MDM4O15151 490 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 ABLIM3O94929 683 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 GLUD1P00367 558 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 SPATA31D3P0C874 917 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 ATF2P15336 505 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 NPR3P17342 541 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 CYP2F1P24903 491 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 SDC4P31431 198 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 EIF3BP55884 814 aaKnown RBP15.72■□□□□ 0.11
SCAF11-204ENST00000395454 SMARCB1Q12824 385 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 DUSP4Q13115 394 aa15.72■□□□□ 0.11
SCAF11-204ENST00000395454 TAF5Q15542 800 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms