RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 NLRC5Q86WI3 1866 aa19.8■□□□□ 0.76
CLDND1-203ENST00000394181 ARHGEF37A1IGU5 675 aa19.79■□□□□ 0.76
CLDND1-203ENST00000394181 FAM72CH0Y354 149 aa19.79■□□□□ 0.76
CLDND1-203ENST00000394181 TNFRSF10BO14763 440 aa19.79■□□□□ 0.76
CLDND1-203ENST00000394181 RIPK2O43353 540 aa19.79■□□□□ 0.76
CLDND1-203ENST00000394181 TRAPPC3O43617 180 aa19.79■□□□□ 0.76
CLDND1-203ENST00000394181 DDR2Q16832 855 aa19.79■□□□□ 0.76
CLDND1-203ENST00000394181 FAM72AQ5TYM5 149 aa19.79■□□□□ 0.76
CLDND1-203ENST00000394181 FAM72DQ6L9T8 149 aa19.79■□□□□ 0.76
CLDND1-203ENST00000394181 TMCO2Q7Z6W1 182 aaPredicted RBP19.79■□□□□ 0.76
CLDND1-203ENST00000394181 FAM72BQ86X60 149 aa19.79■□□□□ 0.76
CLDND1-203ENST00000394181 CDC42EP4Q9H3Q1 356 aaKnown RBP19.79■□□□□ 0.76
CLDND1-203ENST00000394181 GOLGA6CA6NDK9 693 aa19.78■□□□□ 0.76
CLDND1-203ENST00000394181 GOLGA8KD6RF30 607 aa19.78■□□□□ 0.76
CLDND1-203ENST00000394181 H7C0C1 242 aa19.78■□□□□ 0.76
CLDND1-203ENST00000394181 GALTP07902 379 aa19.78■□□□□ 0.76
CLDND1-203ENST00000394181 GOLGA6DP0CG33 693 aa19.78■□□□□ 0.76
CLDND1-203ENST00000394181 ATP5OP48047 213 aa19.78■□□□□ 0.76
CLDND1-203ENST00000394181 SLC5A3P53794 718 aa19.78■□□□□ 0.76
CLDND1-203ENST00000394181 ROR1Q01973 937 aa19.78■□□□□ 0.76
CLDND1-203ENST00000394181 SLMAPQ14BN4 828 aa19.78■□□□□ 0.76
CLDND1-203ENST00000394181 C4orf50Q6ZRC1 276 aa19.78■□□□□ 0.76
CLDND1-203ENST00000394181 ATAD1Q8NBU5 361 aa19.78■□□□□ 0.76
CLDND1-203ENST00000394181 FAM129AQ9BZQ8 928 aa19.78■□□□□ 0.76
CLDND1-203ENST00000394181 USP29Q9HBJ7 922 aa19.78■□□□□ 0.76
CLDND1-203ENST00000394181 TMBIM4Q9HC24 238 aa19.78■□□□□ 0.76
CLDND1-203ENST00000394181 DDIT4Q9NX09 232 aa19.78■□□□□ 0.76
CLDND1-203ENST00000394181 GOLGA6AQ9NYA3 693 aa19.78■□□□□ 0.76
CLDND1-203ENST00000394181 TPX2Q9ULW0 747 aaKnown RBP19.78■□□□□ 0.76
CLDND1-203ENST00000394181 ARPP19P56211 112 aa19.78■□□□□ 0.76
CLDND1-203ENST00000394181 CAV1Q03135 178 aa19.78■□□□□ 0.76
CLDND1-203ENST00000394181 CTXN3Q4LDR2 81 aa19.78■□□□□ 0.76
CLDND1-203ENST00000394181 HP1BP3Q5SSJ5 553 aaPredicted RBP19.78■□□□□ 0.76
CLDND1-203ENST00000394181 RNASEH2BQ5TBB1 312 aaKnown RBP19.78■□□□□ 0.76
CLDND1-203ENST00000394181 ANKRD22Q5VYY1 191 aa19.78■□□□□ 0.76
CLDND1-203ENST00000394181 GPR152Q8TDT2 470 aa19.78■□□□□ 0.76
CLDND1-203ENST00000394181 TOX2Q96NM4 488 aa19.78■□□□□ 0.76
CLDND1-203ENST00000394181 TBX21Q9UL17 535 aa19.78■□□□□ 0.76
CLDND1-203ENST00000394181 SNX10Q9Y5X0 201 aa19.78■□□□□ 0.76
CLDND1-203ENST00000394181 NR2E3Q9Y5X4 410 aa19.78■□□□□ 0.76
CLDND1-203ENST00000394181 VWA8A3KMH1 1905 aa19.77■□□□□ 0.76
CLDND1-203ENST00000394181 GOLGA8MH3BSY2 632 aa19.77■□□□□ 0.76
CLDND1-203ENST00000394181 CREB3O43889 395 aa19.77■□□□□ 0.76
CLDND1-203ENST00000394181 SOAT2O75908 522 aa19.77■□□□□ 0.76
CLDND1-203ENST00000394181 ACSL3O95573 720 aa19.77■□□□□ 0.76
CLDND1-203ENST00000394181 TGM2P21980 687 aa19.77■□□□□ 0.76
CLDND1-203ENST00000394181 ITGB8P26012 769 aa19.77■□□□□ 0.76
CLDND1-203ENST00000394181 RBL1P28749 1068 aa19.77■□□□□ 0.76
CLDND1-203ENST00000394181 ADRA1BP35368 520 aa19.77■□□□□ 0.76
CLDND1-203ENST00000394181 GABPB1Q06547 395 aaPredicted RBP19.77■□□□□ 0.76
CLDND1-203ENST00000394181 MRPL58Q14197 206 aaKnown RBP19.77■□□□□ 0.76
CLDND1-203ENST00000394181 KYNUQ16719 465 aa19.77■□□□□ 0.76
CLDND1-203ENST00000394181 SKIDA1Q1XH10 827 aa19.77■□□□□ 0.76
CLDND1-203ENST00000394181 DNAJC21Q5F1R6 531 aaKnown RBP19.77■□□□□ 0.76
CLDND1-203ENST00000394181 RTP2Q5QGT7 225 aa19.77■□□□□ 0.76
CLDND1-203ENST00000394181 DENND2CQ68D51 928 aa19.77■□□□□ 0.76
CLDND1-203ENST00000394181 CCHCR1Q8TD31 782 aa19.77■□□□□ 0.76
CLDND1-203ENST00000394181 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.77■□□□□ 0.76
CLDND1-203ENST00000394181 TCRBV7S3A2A0A539 114 aa19.77■□□□□ 0.75
CLDND1-203ENST00000394181 SYN3O14994 580 aa19.77■□□□□ 0.75
CLDND1-203ENST00000394181 PPARDQ03181 441 aa19.77■□□□□ 0.75
CLDND1-203ENST00000394181 SPDYCQ5MJ68 293 aa19.77■□□□□ 0.75
CLDND1-203ENST00000394181 SYCP2LQ5T4T6 812 aa19.77■□□□□ 0.75
CLDND1-203ENST00000394181 NCBP2-AS2Q69YL0 99 aa19.77■□□□□ 0.75
CLDND1-203ENST00000394181 VSIG1Q86XK7 387 aa19.77■□□□□ 0.75
CLDND1-203ENST00000394181 BBOF1Q8ND07 529 aa19.77■□□□□ 0.75
CLDND1-203ENST00000394181 COLEC11Q9BWP8 271 aa19.77■□□□□ 0.75
CLDND1-203ENST00000394181 FBXW11Q9UKB1 542 aa19.77■□□□□ 0.75
CLDND1-203ENST00000394181 NUDT5Q9UKK9 219 aa19.77■□□□□ 0.75
CLDND1-203ENST00000394181 PTPRDP23468 1912 aa19.76■□□□□ 0.75
CLDND1-203ENST00000394181 NUDT17P0C025 328 aa19.76■□□□□ 0.75
CLDND1-203ENST00000394181 FGFR3P22607 806 aa19.76■□□□□ 0.75
CLDND1-203ENST00000394181 CTCFP49711 727 aaPredicted RBP19.76■□□□□ 0.75
CLDND1-203ENST00000394181 IFFO1Q0D2I5 559 aa19.76■□□□□ 0.75
CLDND1-203ENST00000394181 MTM1Q13496 603 aa19.76■□□□□ 0.75
CLDND1-203ENST00000394181 FUT10Q6P4F1 479 aa19.76■□□□□ 0.75
CLDND1-203ENST00000394181 SCD5Q86SK9 330 aa19.76■□□□□ 0.75
CLDND1-203ENST00000394181 TAC4Q86UU9 113 aa19.76■□□□□ 0.75
CLDND1-203ENST00000394181 ZCCHC9Q8N567 271 aaKnown RBP19.76■□□□□ 0.75
CLDND1-203ENST00000394181 RNF139Q8WU17 664 aa19.76■□□□□ 0.75
CLDND1-203ENST00000394181 IRGQQ8WZA9 623 aa19.76■□□□□ 0.75
CLDND1-203ENST00000394181 CPT1BQ92523 772 aa19.76■□□□□ 0.75
CLDND1-203ENST00000394181 NMUR1Q9HB89 426 aa19.76■□□□□ 0.75
CLDND1-203ENST00000394181 ARHGEF4Q9NR80 690 aa19.76■□□□□ 0.75
CLDND1-203ENST00000394181 TMEM39AQ9NV64 488 aa19.76■□□□□ 0.75
CLDND1-203ENST00000394181 SLC27A5Q9Y2P5 690 aa19.76■□□□□ 0.75
CLDND1-203ENST00000394181 FARP1Q9Y4F1 1045 aaPredicted RBP19.76■□□□□ 0.75
CLDND1-203ENST00000394181 ZNF487B1APH4 448 aa19.76■□□□□ 0.75
CLDND1-203ENST00000394181 KCNN4O15554 427 aa19.76■□□□□ 0.75
CLDND1-203ENST00000394181 MYZAPP0CAP1 466 aa19.76■□□□□ 0.75
CLDND1-203ENST00000394181 USP46P62068 366 aa19.76■□□□□ 0.75
CLDND1-203ENST00000394181 DCP1BQ8IZD4 617 aaKnown RBP19.76■□□□□ 0.75
CLDND1-203ENST00000394181 PRCCQ92733 491 aaPredicted RBP19.76■□□□□ 0.75
CLDND1-203ENST00000394181 C9orf72Q96LT7 481 aa19.76■□□□□ 0.75
CLDND1-203ENST00000394181 CRISPLD1Q9H336 500 aa19.76■□□□□ 0.75
CLDND1-203ENST00000394181 PNPLA8Q9NP80 782 aa19.76■□□□□ 0.75
CLDND1-203ENST00000394181 DTLQ9NZJ0 730 aa19.76■□□□□ 0.75
CLDND1-203ENST00000394181 BCCIPQ9P287 314 aaKnown RBP eCLIP19.76■□□□□ 0.75
CLDND1-203ENST00000394181 SMIM23A6NLE4 172 aa19.75■□□□□ 0.75
CLDND1-203ENST00000394181 BANF1O75531 89 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms