RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 ITPKAP23677 461 aa11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 TBXAS1P24557 533 aaPredicted RBP11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 CYLC1P35663 651 aaPredicted RBP11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 SOX5P35711 763 aa11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 GCNT1Q02742 428 aa11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 KLHL30Q0D2K2 578 aa11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 BYSLQ13895 437 aaKnown RBP11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 ALKAL1Q6UXT8 129 aa11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 DNAJB7Q7Z6W7 309 aaPredicted RBP11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 ITIH5Q86UX2 942 aa11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 ARHGEF19Q8IW93 802 aa11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 CPA6Q8N4T0 437 aa11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 TATDN2Q93075 761 aa11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 FAM84AQ96KN4 292 aa11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 SUSD3Q96L08 255 aa11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 CCDC42Q96M95 316 aa11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 DCBLD2Q96PD2 775 aa11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 GCNAQ96QF7 691 aa11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 CHP1Q99653 195 aa11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 PI4K2AQ9BTU6 479 aa11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 DEF6Q9H4E7 631 aa11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 SLC38A7Q9NVC3 462 aa11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 DPP3Q9NY33 737 aa11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 ITGA11Q9UKX5 1188 aa11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 EPN1Q9Y6I3 576 aaPredicted RBP11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 SPTA1P02549 2419 aa11.68□□□□□ -0.54
VTI1BP2-201ENST00000394154 SMIM28A0A1B0GU29 152 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 SSU72P8A0A1W2PR75 194 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 TRABD2BA6NFA1 517 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 SOWAHDA6NJG2 315 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 F8VZ95 297 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 FOXN3O00409 490 aaPredicted RBP11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 ZSCAN12O43309 604 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 IPO7O95373 1038 aaKnown RBP11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 CST3P01034 146 aaPredicted RBP11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 KRT19P08727 400 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 KCNE1P15382 129 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 CDC25CP30307 473 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 ATICP31939 592 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 GJA4P35212 333 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 MYL6P60660 151 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 NOP14P78316 857 aaKnown RBP11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 RBP5P82980 135 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 CYP4F8P98187 520 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 CFHR1Q03591 330 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 ARID5AQ03989 594 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 SOX4Q06945 474 aaPredicted RBP11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 DUSP4Q13115 394 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 PDGFRLQ15198 375 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 TDRD12Q587J7 1177 aaKnown RBP11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 NAIF1Q69YI7 327 aaPredicted RBP11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 SMYD5Q6GMV2 418 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 CC2D1AQ6P1N0 951 aaPredicted RBP11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 IRF2BP2Q7Z5L9 587 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 VPS36Q86VN1 386 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 TTC30AQ86WT1 665 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 CMTM8Q8IZV2 173 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 OR2I1PQ8NGU4 316 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 USP33Q8TEY7 942 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 WHAMMQ8TF30 809 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 RLN3Q8WXF3 142 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 JAKMIP2Q96AA8 810 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 PGLYRP2Q96PD5 576 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 OXCT2Q9BYC2 517 aaPredicted RBP11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 SMG9Q9H0W8 520 aaKnown RBP11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 NHEJ1Q9H9Q4 299 aaPredicted RBP11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 KIF9Q9HAQ2 790 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 CNTN3Q9P232 1028 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 MMP17Q9ULZ9 603 aa11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 UBQLN1Q9UMX0 589 aaKnown RBP11.67□□□□□ -0.54
VTI1BP2-201ENST00000394154 AKR1B10O60218 316 aa11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 GJB3O75712 270 aa11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 GFPT2O94808 682 aa11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 VNN2O95498 520 aa11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 ASS1P00966 412 aaKnown RBP11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 P4HA1P13674 534 aa11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 ANXA13P27216 316 aa11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 RPL9P32969 192 aaKnown RBP11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 EIF4A3P38919 411 aaKnown RBP11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 USP8P40818 1118 aa11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 PRKCIP41743 596 aa11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 YWHAEP62258 255 aaKnown RBP11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 KCNC4Q03721 635 aa11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 CRY1Q16526 586 aa11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 ZNF699Q32M78 642 aa11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 XKR4Q5GH76 650 aa11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 E4F1Q66K89 784 aaPredicted RBP11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 RAD9BQ6WBX8 426 aa11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 SLCO6A1Q86UG4 719 aa11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 GALNT15Q8N3T1 639 aa11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 C1orf127Q8N9H9 656 aa11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 SHC3Q92529 594 aa11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 FAXDC2Q96IV6 333 aa11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 KREMEN1Q96MU8 473 aa11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 SLC46A2Q9BY10 475 aa11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 CRISPLD1Q9H336 500 aa11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 KCND1Q9NSA2 647 aa11.66□□□□□ -0.54
VTI1BP2-201ENST00000394154 ARHGAP20Q9P2F6 1191 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms