RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 J3KTA2 159 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 PIP5K1BO14986 540 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 FYB1O15117 783 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 FFAR2O15552 330 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 PRAMEF2O60811 474 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 CYP2D6P10635 497 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 CYP2A6P11509 494 aaPredicted RBP3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 NPPBP16860 134 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 MMP8P22894 467 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 CERS1P27544 350 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 GALNSP34059 522 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 IL6STP40189 918 aaPredicted RBP3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 JAK3P52333 1124 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 ALDH18A1P54886 795 aaKnown RBP3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 SRSF4Q08170 494 aaKnown RBP3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 FOXF2Q12947 444 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 SEMA3BQ13214 749 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 CSHL1Q14406 222 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 KCNJ12Q14500 433 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 CCDC142Q17RM4 750 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 FNDC1Q4ZHG4 1894 aaPredicted RBP3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 KIAA1614Q5VZ46 1190 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 FAM90A2PQ658T7 463 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 CCDC144NLQ6NUI1 221 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 PGBD2Q6P3X8 592 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 ZNF66Q6ZN08 573 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 KRT27Q7Z3Y8 459 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 GATAD2AQ86YP4 633 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 MYLK4Q86YV6 388 aaPredicted RBP3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 C16orf71Q8IYS4 520 aaPredicted RBP3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 SPICE1Q8N0Z3 855 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 CLASRPQ8N2M8 674 aaKnown RBP3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 ZNF527Q8NB42 609 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 OVCA2Q8WZ82 227 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 DDB2Q92466 427 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 SLC39A13Q96H72 371 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 HIC2Q96JB3 615 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 C5orf34Q96MH7 638 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 PRPF18Q99633 342 aaKnown RBP3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 CRB3Q9BUF7 120 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 ADGRE3Q9BY15 652 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 SEMA4CQ9C0C4 833 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 WDR12Q9GZL7 423 aaKnown RBP3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 TMEM8AQ9HCN3 771 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 PLCB1Q9NQ66 1216 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 SLC52A1Q9NWF4 448 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 GAR1Q9NY12 217 aaKnown RBP3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 FLRT1Q9NZU1 646 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 VPS4AQ9UN37 437 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 FRMD4BQ9Y2L6 1034 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 PNMA6EA0A0J9YXQ4 647 aa3.56□□□□□ -1.84
RNU6-550P-201ENST00000391057 F5H423 210 aaPredicted RBP3.56□□□□□ -1.84
RNU6-550P-201ENST00000391057 CLIC1O00299 241 aa3.56□□□□□ -1.84
RNU6-550P-201ENST00000391057 PCDH17O14917 1159 aa3.56□□□□□ -1.84
RNU6-550P-201ENST00000391057 SKAP2O75563 359 aaPredicted RBP3.56□□□□□ -1.84
RNU6-550P-201ENST00000391057 LATS1O95835 1130 aa3.56□□□□□ -1.84
RNU6-550P-201ENST00000391057 SLC3A2P08195 630 aaKnown RBP3.56□□□□□ -1.84
RNU6-550P-201ENST00000391057 MPGP29372 298 aa3.56□□□□□ -1.84
RNU6-550P-201ENST00000391057 IGHMBP2P38935 993 aaKnown RBP3.56□□□□□ -1.84
RNU6-550P-201ENST00000391057 RAE1P78406 368 aaKnown RBP3.56□□□□□ -1.84
RNU6-550P-201ENST00000391057 MORC3Q14149 939 aa3.56□□□□□ -1.84
RNU6-550P-201ENST00000391057 AWAT1Q58HT5 328 aa3.56□□□□□ -1.84
RNU6-550P-201ENST00000391057 GGT6Q6P531 493 aa3.56□□□□□ -1.84
RNU6-550P-201ENST00000391057 C8orf58Q8NAV2 365 aa3.56□□□□□ -1.84
RNU6-550P-201ENST00000391057 VPS37AQ8NEZ2 397 aa3.56□□□□□ -1.84
RNU6-550P-201ENST00000391057 PMM1Q92871 262 aa3.56□□□□□ -1.84
RNU6-550P-201ENST00000391057 PRR11Q96HE9 360 aaPredicted RBP3.56□□□□□ -1.84
RNU6-550P-201ENST00000391057 EFHD1Q9BUP0 239 aa3.56□□□□□ -1.84
RNU6-550P-201ENST00000391057 EPS8L2Q9H6S3 715 aa3.56□□□□□ -1.84
RNU6-550P-201ENST00000391057 RXFP3Q9NSD7 469 aa3.56□□□□□ -1.84
RNU6-550P-201ENST00000391057 FBXO28Q9NVF7 368 aa3.56□□□□□ -1.84
RNU6-550P-201ENST00000391057 IGSF9Q9P2J2 1179 aa3.56□□□□□ -1.84
RNU6-550P-201ENST00000391057 TAGLN3Q9UI15 199 aa3.56□□□□□ -1.84
RNU6-550P-201ENST00000391057 SPATA31A1Q5TZJ5 1347 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 AQP12BA6NM10 295 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 PPP6CO00743 305 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 NPC1O15118 1278 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 ASNA1O43681 348 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 NTSR2O95665 410 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 MBPP02686 304 aaPredicted RBP3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 TUBB4AP04350 444 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 ANXA6P08133 673 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 CELA2AP08217 269 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 ITGA5P08648 1049 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 MATN1P21941 496 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 DUSP1P28562 367 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 EPHB2P29323 1055 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 AKT1P31749 480 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 WDR5P61964 334 aaKnown RBP3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 ICA1Q05084 483 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 SLC14A1Q13336 389 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 CBFBQ13951 182 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 SPARCL1Q14515 664 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 ZNF268Q14587 947 aaPredicted RBP3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 EZH2Q15910 746 aaKnown RBP3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 CNGA3Q16281 694 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 MIS18BP1Q6P0N0 1132 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 RANBP10Q6VN20 620 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 ZNF813Q6ZN06 617 aa3.55□□□□□ -1.84
RNU6-550P-201ENST00000391057 PIK3AP1Q6ZUJ8 805 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms