RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 BEND5Q7L4P6 421 aa11.92□□□□□ -0.5
IGHV4-28-201ENST00000390612 WDR5BQ86VZ2 330 aa11.92□□□□□ -0.5
IGHV4-28-201ENST00000390612 MIB1Q86YT6 1006 aa11.92□□□□□ -0.5
IGHV4-28-201ENST00000390612 SIX6OS1Q8N1H7 587 aa11.92□□□□□ -0.5
IGHV4-28-201ENST00000390612 RPLP0P6Q8NHW5 317 aa11.92□□□□□ -0.5
IGHV4-28-201ENST00000390612 CCDC26Q8TAB7 109 aa11.92□□□□□ -0.5
IGHV4-28-201ENST00000390612 CLEC4CQ8WTT0 213 aa11.92□□□□□ -0.5
IGHV4-28-201ENST00000390612 DCLK3Q9C098 648 aa11.92□□□□□ -0.5
IGHV4-28-201ENST00000390612 HSD3B7Q9H2F3 369 aa11.92□□□□□ -0.5
IGHV4-28-201ENST00000390612 POLR3BQ9NW08 1133 aaPredicted RBP11.92□□□□□ -0.5
IGHV4-28-201ENST00000390612 FANCLQ9NW38 375 aa11.92□□□□□ -0.5
IGHV4-28-201ENST00000390612 WDR35Q9P2L0 1181 aa11.92□□□□□ -0.5
IGHV4-28-201ENST00000390612 RASAL2Q9UJF2 1139 aa11.92□□□□□ -0.5
IGHV4-28-201ENST00000390612 STOML2Q9UJZ1 356 aa11.92□□□□□ -0.5
IGHV4-28-201ENST00000390612 AGO1Q9UL18 857 aaKnown RBP11.92□□□□□ -0.5
IGHV4-28-201ENST00000390612 HCN2Q9UL51 889 aa11.92□□□□□ -0.5
IGHV4-28-201ENST00000390612 HBS1LQ9Y450 684 aaKnown RBP11.92□□□□□ -0.5
IGHV4-28-201ENST00000390612 CKAP5Q14008 2032 aa11.92□□□□□ -0.5
IGHV4-28-201ENST00000390612 SLC12A8A0AV02 714 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 PAPSS1O43252 624 aaPredicted RBP11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 THAP12O43422 761 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 MED7O43513 233 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 HRO43593 1189 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 PENKP01210 267 aaPredicted RBP11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 IGLV3-27P01718 113 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 LTFP02788 710 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 APODP05090 189 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 CISD3P0C7P0 127 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 TYRP14679 529 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 ZNF18P17022 549 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 CORO1AP31146 461 aaKnown RBP11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 CNR2P34972 360 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 ACADSBP45954 432 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 FNTBP49356 437 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 KRT31Q15323 416 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 STX1AQ16623 288 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 SASS6Q6UVJ0 657 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 RSRC2Q7L4I2 434 aaKnown RBP11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 APTXQ7Z2E3 356 aaKnown RBP11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 LONP2Q86WA8 852 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 FMNL3Q8IVF7 1028 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 CPXM2Q8N436 756 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 CAMKK1Q8N5S9 505 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 KCNV2Q8TDN2 545 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 EDEM1Q92611 657 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 PLD4Q96BZ4 506 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 LHX5Q9H2C1 402 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 PLCB1Q9NQ66 1216 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 ARHGEF4Q9NR80 690 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 DEC1Q9P2X7 70 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 EBF1Q9UH73 591 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 STRIP2Q9ULQ0 834 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 STARD13Q9Y3M8 1113 aa11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 CNOT1A5YKK6 2376 aaKnown RBP11.91□□□□□ -0.5
IGHV4-28-201ENST00000390612 PIK3R2O00459 728 aa11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 TRIM24O15164 1050 aa11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 CHKAP35790 457 aa11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 EIF4EBP2Q13542 120 aaPredicted RBP11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 DMC1Q14565 340 aa11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 DRAP1Q14919 205 aaPredicted RBP11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 ANO4Q32M45 955 aa11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 HSF5Q4G112 596 aaPredicted RBP11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 EMC10Q5UCC4 262 aa11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 FYB2Q5VWT5 728 aa11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 RNF43Q68DV7 783 aa11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 SCUBE3Q8IX30 993 aa11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 NAT16Q8N8M0 369 aa11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 TERB1Q8NA31 727 aa11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 IL17RCQ8NAC3 791 aa11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 RNF139Q8WU17 664 aa11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 ACDQ96AP0 544 aa11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 BBS2Q9BXC9 721 aa11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 GANQ9H2C0 597 aa11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 TAB2Q9NYJ8 693 aa11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 LIMA1Q9UHB6 759 aaKnown RBP11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 SFMBT1Q9UHJ3 866 aa11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 MMP17Q9ULZ9 603 aa11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 SIK3Q9Y2K2 1263 aa11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 FHOD1Q9Y613 1164 aa11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 CACNA1AO00555 2505 aa11.9□□□□□ -0.5
IGHV4-28-201ENST00000390612 DOCK4Q8N1I0 1966 aa11.89□□□□□ -0.51
IGHV4-28-201ENST00000390612 E5RJQ4 531 aa11.89□□□□□ -0.51
IGHV4-28-201ENST00000390612 SART1O43290 800 aaKnown RBP11.89□□□□□ -0.51
IGHV4-28-201ENST00000390612 LATS1O95835 1130 aa11.89□□□□□ -0.51
IGHV4-28-201ENST00000390612 HMBSP08397 361 aa11.89□□□□□ -0.51
IGHV4-28-201ENST00000390612 PNMA6AP0CW24 399 aaPredicted RBP11.89□□□□□ -0.51
IGHV4-28-201ENST00000390612 HNRNPLP14866 589 aaKnown RBP eCLIP11.89□□□□□ -0.51
IGHV4-28-201ENST00000390612 UCHL3P15374 230 aa11.89□□□□□ -0.51
IGHV4-28-201ENST00000390612 CDH5P33151 784 aaPredicted RBP11.89□□□□□ -0.51
IGHV4-28-201ENST00000390612 USP8P40818 1118 aa11.89□□□□□ -0.51
IGHV4-28-201ENST00000390612 MYL5Q02045 173 aa11.89□□□□□ -0.51
IGHV4-28-201ENST00000390612 PTK2Q05397 1052 aa11.89□□□□□ -0.51
IGHV4-28-201ENST00000390612 KDSRQ06136 332 aa11.89□□□□□ -0.51
IGHV4-28-201ENST00000390612 TYRO3Q06418 890 aa11.89□□□□□ -0.51
IGHV4-28-201ENST00000390612 RING1Q06587 406 aa11.89□□□□□ -0.51
IGHV4-28-201ENST00000390612 PDCLQ13371 301 aa11.89□□□□□ -0.51
IGHV4-28-201ENST00000390612 NNTQ13423 1086 aa11.89□□□□□ -0.51
IGHV4-28-201ENST00000390612 PREPLQ4J6C6 727 aaPredicted RBP11.89□□□□□ -0.51
IGHV4-28-201ENST00000390612 C2orf27AQ580R0 203 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms