RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 SCUBE1Q8IWY4 988 aa19.48■□□□□ 0.71
CSPG5-202ENST00000383738 NDUFAF2Q8N183 169 aa19.48■□□□□ 0.71
CSPG5-202ENST00000383738 NPLOC4Q8TAT6 608 aa19.48■□□□□ 0.71
CSPG5-202ENST00000383738 SENP8Q96LD8 212 aa19.48■□□□□ 0.71
CSPG5-202ENST00000383738 SYT15Q9BQS2 421 aa19.48■□□□□ 0.71
CSPG5-202ENST00000383738 DHX33Q9H6R0 707 aaKnown RBP19.48■□□□□ 0.71
CSPG5-202ENST00000383738 RSAD1Q9HA92 442 aa19.48■□□□□ 0.71
CSPG5-202ENST00000383738 SP110Q9HB58 689 aa19.48■□□□□ 0.71
CSPG5-202ENST00000383738 XPO7Q9UIA9 1087 aaKnown RBP19.48■□□□□ 0.71
CSPG5-202ENST00000383738 BARX2Q9UMQ3 279 aaPredicted RBP19.48■□□□□ 0.71
CSPG5-202ENST00000383738 MROH7Q68CQ1 1323 aa19.48■□□□□ 0.71
CSPG5-202ENST00000383738 PKD1L3Q7Z443 1732 aa19.48■□□□□ 0.71
CSPG5-202ENST00000383738 NCKAP1LP55160 1127 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 BLMHQ13867 455 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 PPP1R15BQ5SWA1 713 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 ZNF75CPQ92670 426 aaPredicted RBP19.47■□□□□ 0.71
CSPG5-202ENST00000383738 CLPTM1LQ96KA5 538 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 DDX56Q9NY93 547 aaKnown RBP19.47■□□□□ 0.71
CSPG5-202ENST00000383738 A0A0B4J269 797 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 A0A1W2PPM1 405 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 EEF2KO00418 725 aaKnown RBP19.47■□□□□ 0.71
CSPG5-202ENST00000383738 FCHO1O14526 889 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 PEX1O43933 1283 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 MICAL2O94851 1124 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 SH3BGRP55822 239 aaPredicted RBP19.47■□□□□ 0.71
CSPG5-202ENST00000383738 GCNT1Q02742 428 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 RPS6KA2Q15349 733 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 C16orf87Q6PH81 154 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 TRIM42Q8IWZ5 723 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 YME1L1Q96TA2 773 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 EPAS1Q99814 870 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 MINDY3Q9H8M7 445 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 RBAK-RBAKDNI3L0D1 243 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 BRCC3P46736 316 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 EFEMP1Q12805 493 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 ACTL9Q8TC94 416 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 FAXDC2Q96IV6 333 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 CELF6Q96J87 481 aaKnown RBP19.47■□□□□ 0.71
CSPG5-202ENST00000383738 ASB7Q9H672 318 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 CAAP1Q9H8G2 361 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 CHCHD3Q9NX63 227 aaKnown RBP19.47■□□□□ 0.71
CSPG5-202ENST00000383738 PDP2Q9P2J9 529 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 TUBGCP4Q9UGJ1 667 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 ARHGAP26Q9UNA1 814 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 PYGBP11216 843 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 IL1RL1Q01638 556 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 KHDC1Q4VXA5 237 aaKnown RBP19.47■□□□□ 0.71
CSPG5-202ENST00000383738 CCNYL1Q8N7R7 359 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 NDRG1Q92597 394 aaKnown RBP19.47■□□□□ 0.71
CSPG5-202ENST00000383738 TMEM39AQ9NV64 488 aa19.47■□□□□ 0.71
CSPG5-202ENST00000383738 ATP6V1C1P21283 382 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 OTUD4Q01804 1114 aaKnown RBP19.46■□□□□ 0.71
CSPG5-202ENST00000383738 KCNA10Q16322 511 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 TTC27Q6P3X3 843 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 ZNF677Q86XU0 584 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 MFN1Q8IWA4 741 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 CENPTQ96BT3 561 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 RMDN1Q96DB5 314 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 TMA16Q96EY4 203 aaKnown RBP19.46■□□□□ 0.71
CSPG5-202ENST00000383738 ODC1P11926 461 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 FKBP1BP68106 108 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 FOXD4Q12950 439 aaPredicted RBP19.46■□□□□ 0.71
CSPG5-202ENST00000383738 BNIP1Q12981 228 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 GRAMD4Q6IC98 578 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 MFSD7Q6UXD7 560 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 B3GNT5Q9BYG0 378 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.46■□□□□ 0.71
CSPG5-202ENST00000383738 TNFSF13BQ9Y275 285 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 POU5F1BQ06416 359 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 STX3Q13277 289 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 ANKRD23Q86SG2 305 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 CHSY1Q86X52 802 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 EGFL6Q8IUX8 553 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 FBXO36Q8NEA4 188 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 PPTC7Q8NI37 304 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 ALKBH8Q96BT7 664 aaKnown RBP19.46■□□□□ 0.71
CSPG5-202ENST00000383738 HES6Q96HZ4 224 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 WDCPQ9H6R7 721 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 SENP1Q9P0U3 644 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 TLK1Q9UKI8 766 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 USP18Q9UMW8 372 aa19.46■□□□□ 0.71
CSPG5-202ENST00000383738 NHSL1Q5SYE7 1610 aa19.45■□□□□ 0.7
CSPG5-202ENST00000383738 KRT38O76015 456 aa19.45■□□□□ 0.7
CSPG5-202ENST00000383738 WEE1P30291 646 aa19.45■□□□□ 0.7
CSPG5-202ENST00000383738 PNPLA4P41247 253 aa19.45■□□□□ 0.7
CSPG5-202ENST00000383738 YWHAHQ04917 246 aaPredicted RBP19.45■□□□□ 0.7
CSPG5-202ENST00000383738 SLC12A1Q13621 1099 aa19.45■□□□□ 0.7
CSPG5-202ENST00000383738 GABPB2Q8TAK5 448 aaPredicted RBP19.45■□□□□ 0.7
CSPG5-202ENST00000383738 PAFAH2Q99487 392 aa19.45■□□□□ 0.7
CSPG5-202ENST00000383738 PFDN4Q9NQP4 134 aa19.45■□□□□ 0.7
CSPG5-202ENST00000383738 AJAP1Q9UKB5 411 aaPredicted RBP19.45■□□□□ 0.7
CSPG5-202ENST00000383738 NUP188Q5SRE5 1749 aa19.45■□□□□ 0.7
CSPG5-202ENST00000383738 FAM237BA0A1B0GVD1 139 aa19.45■□□□□ 0.7
CSPG5-202ENST00000383738 HNRNPRO43390 633 aaKnown RBP19.45■□□□□ 0.7
CSPG5-202ENST00000383738 TPST1O60507 370 aa19.45■□□□□ 0.7
CSPG5-202ENST00000383738 PMPCBO75439 489 aa19.45■□□□□ 0.7
CSPG5-202ENST00000383738 ALDH2P05091 517 aa19.45■□□□□ 0.7
CSPG5-202ENST00000383738 TAP1Q03518 808 aa19.45■□□□□ 0.7
CSPG5-202ENST00000383738 ZNF268Q14587 947 aaPredicted RBP19.45■□□□□ 0.7
CSPG5-202ENST00000383738 ACBD5Q5T8D3 534 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms