RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 DPYSL4O14531 572 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 POMCP01189 267 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 HOXD10P28358 340 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 HARS2P49590 506 aaKnown RBP17.65■□□□□ 0.42
SGCB-201ENST00000381431 KCNJ2P63252 427 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 MRNIPQ6NTE8 343 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 SYT15Q9BQS2 421 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 GPAMQ9HCL2 828 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 NUDT5Q9UKK9 219 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 ADM5C9JUS6 153 aa17.64■□□□□ 0.41
SGCB-201ENST00000381431 ZSCAN9O15535 394 aaPredicted RBP17.64■□□□□ 0.41
SGCB-201ENST00000381431 TMCC1O94876 653 aa17.64■□□□□ 0.41
SGCB-201ENST00000381431 FKBP9O95302 570 aa17.64■□□□□ 0.41
SGCB-201ENST00000381431 NFICP08651 508 aa17.64■□□□□ 0.41
SGCB-201ENST00000381431 TM4SF1P30408 202 aa17.64■□□□□ 0.41
SGCB-201ENST00000381431 GJC2Q5T442 439 aaPredicted RBP17.64■□□□□ 0.41
SGCB-201ENST00000381431 FKBP9P1Q75LS8 142 aa17.64■□□□□ 0.41
SGCB-201ENST00000381431 TFAP2DQ7Z6R9 452 aa17.64■□□□□ 0.41
SGCB-201ENST00000381431 KIAA0319LQ8IZA0 1049 aa17.64■□□□□ 0.41
SGCB-201ENST00000381431 MSL3Q8N5Y2 521 aaKnown RBP17.64■□□□□ 0.41
SGCB-201ENST00000381431 USP13Q92995 863 aaPredicted RBP17.64■□□□□ 0.41
SGCB-201ENST00000381431 ADARB2Q9NS39 739 aaKnown RBP17.64■□□□□ 0.41
SGCB-201ENST00000381431 GID8Q9NWU2 228 aa17.64■□□□□ 0.41
SGCB-201ENST00000381431 FARP1Q9Y4F1 1045 aaPredicted RBP17.64■□□□□ 0.41
SGCB-201ENST00000381431 MEI4A8MW99 385 aa17.64■□□□□ 0.41
SGCB-201ENST00000381431 PAEPP09466 180 aa17.64■□□□□ 0.41
SGCB-201ENST00000381431 MAP4P27816 1152 aaKnown RBP17.64■□□□□ 0.41
SGCB-201ENST00000381431 MARSP56192 900 aaKnown RBP17.64■□□□□ 0.41
SGCB-201ENST00000381431 NOMO3P69849 1222 aa17.64■□□□□ 0.41
SGCB-201ENST00000381431 MMRN1Q13201 1228 aa17.64■□□□□ 0.41
SGCB-201ENST00000381431 A0A096LPK6 155 aa17.64■□□□□ 0.41
SGCB-201ENST00000381431 FSCN2O14926 492 aa17.64■□□□□ 0.41
SGCB-201ENST00000381431 LIASO43766 372 aa17.64■□□□□ 0.41
SGCB-201ENST00000381431 OAZ1P54368 228 aa17.64■□□□□ 0.41
SGCB-201ENST00000381431 PDPK2PQ6A1A2 396 aa17.64■□□□□ 0.41
SGCB-201ENST00000381431 GLT1D1Q96MS3 346 aa17.64■□□□□ 0.41
SGCB-201ENST00000381431 TTYH3Q9C0H2 523 aa17.64■□□□□ 0.41
SGCB-201ENST00000381431 IRAK4Q9NWZ3 460 aa17.64■□□□□ 0.41
SGCB-201ENST00000381431 NCKIPSDQ9NZQ3 722 aa17.64■□□□□ 0.41
SGCB-201ENST00000381431 TCRBV7S2A1N4TA0A589 114 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 MYO1GB0I1T2 1018 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 CCDC130P13994 396 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 RGS4P49798 205 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 CAPSQ13938 189 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 TATDN1Q6P1N9 297 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 BNC2Q6ZN30 1099 aaPredicted RBP17.63■□□□□ 0.41
SGCB-201ENST00000381431 OXNAD1Q96HP4 312 aaPredicted RBP17.63■□□□□ 0.41
SGCB-201ENST00000381431 TCF7L2Q9NQB0 619 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 MAGEA13PA6NCF6 341 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 OPLAHO14841 1288 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 DCXO43602 365 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 PDE5AO76074 875 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 VAPBO95292 243 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 HNRNPCP07910 306 aaKnown RBP eCLIP17.63■□□□□ 0.41
SGCB-201ENST00000381431 ADCYAP1R1P41586 468 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 SLC6A3Q01959 620 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 CRY2Q49AN0 593 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 TCHHL1Q5QJ38 904 aaPredicted RBP17.63■□□□□ 0.41
SGCB-201ENST00000381431 TMPRSS6Q8IU80 811 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 FBXO32Q969P5 355 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 SH3GL3Q99963 347 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 DNAJC5Q9H3Z4 198 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 SIGLEC16A6NMB1 481 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 ELF3P78545 371 aaPredicted RBP17.63■□□□□ 0.41
SGCB-201ENST00000381431 LRRC74AQ0VAA2 488 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 CYLC2Q14093 348 aaPredicted RBP17.63■□□□□ 0.41
SGCB-201ENST00000381431 MTFR1Q15390 333 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 EEF1DP3Q658K8 133 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 APTXQ7Z2E3 356 aaKnown RBP17.63■□□□□ 0.41
SGCB-201ENST00000381431 SH3TC2Q8TF17 1288 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 HIC2Q96JB3 615 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 THUMPD3Q9BV44 507 aaKnown RBP17.63■□□□□ 0.41
SGCB-201ENST00000381431 PIDD1Q9HB75 910 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 ERI2A8K979 691 aaKnown RBP17.63■□□□□ 0.41
SGCB-201ENST00000381431 NUDT17P0C025 328 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 DRD4P21917 467 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 SLC1A6P48664 564 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 PLK1P53350 603 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 AGKQ53H12 422 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 SLC27A1Q6PCB7 646 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 TDRD5Q8NAT2 981 aaKnown RBP17.63■□□□□ 0.41
SGCB-201ENST00000381431 LZTS1Q9Y250 596 aa17.63■□□□□ 0.41
SGCB-201ENST00000381431 CNTFP26441 200 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 LAMB3Q13751 1172 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 ILDR2Q71H61 639 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 PPP1R2P1Q96PQ5 205 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 DDX50Q9BQ39 737 aaKnown RBP17.62■□□□□ 0.41
SGCB-201ENST00000381431 BTBD10Q9BSF8 475 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 BCAS3Q9H6U6 928 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 ZFYVE28Q9HCC9 887 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 PTPRHQ9HD43 1115 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.62■□□□□ 0.41
SGCB-201ENST00000381431 NR2E1Q9Y466 385 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 ASMTLO95671 621 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 CRYMQ14894 314 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 C9orf131Q5VYM1 1079 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 HS6ST3Q8IZP7 471 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 ATP6V0D2Q8N8Y2 350 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 ART4Q93070 314 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 LSM7Q9UK45 103 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms