RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 DDX6P26196 483 aaKnown RBP eCLIP4.9□□□□□ -1.63
C9orf72-203ENST00000380003 RPL13P26373 211 aaKnown RBP4.9□□□□□ -1.63
C9orf72-203ENST00000380003 RPL6Q02878 288 aaKnown RBP4.9□□□□□ -1.63
C9orf72-203ENST00000380003 NR1H3Q13133 447 aa4.9□□□□□ -1.63
C9orf72-203ENST00000380003 CUL2Q13617 745 aa4.9□□□□□ -1.63
C9orf72-203ENST00000380003 ARHGAP44Q17R89 818 aa4.9□□□□□ -1.63
C9orf72-203ENST00000380003 CCDC157Q569K6 752 aa4.9□□□□□ -1.63
C9orf72-203ENST00000380003 BTBD8Q5XKL5 378 aa4.9□□□□□ -1.63
C9orf72-203ENST00000380003 ATL3Q6DD88 541 aa4.9□□□□□ -1.63
C9orf72-203ENST00000380003 TMC2Q8TDI7 906 aa4.9□□□□□ -1.63
C9orf72-203ENST00000380003 HNRNPABQ99729 332 aaKnown RBP4.9□□□□□ -1.63
C9orf72-203ENST00000380003 KLF16Q9BXK1 252 aaPredicted RBP4.9□□□□□ -1.63
C9orf72-203ENST00000380003 DUSP16Q9BY84 665 aa4.9□□□□□ -1.63
C9orf72-203ENST00000380003 MIR1-1HGQ9H1L0 117 aa4.9□□□□□ -1.63
C9orf72-203ENST00000380003 VRTNQ9H8Y1 702 aa4.9□□□□□ -1.63
C9orf72-203ENST00000380003 CSNK1G1Q9HCP0 422 aa4.9□□□□□ -1.63
C9orf72-203ENST00000380003 MBD1Q9UIS9 605 aaPredicted RBP4.9□□□□□ -1.63
C9orf72-203ENST00000380003 AGO1Q9UL18 857 aaKnown RBP4.9□□□□□ -1.63
C9orf72-203ENST00000380003 PCDHB4Q9Y5E5 795 aa4.9□□□□□ -1.63
C9orf72-203ENST00000380003 ATRXP46100 2492 aa4.9□□□□□ -1.63
C9orf72-203ENST00000380003 ACACAQ13085 2346 aa4.9□□□□□ -1.63
C9orf72-203ENST00000380003 A0A1W2PQF6 199 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 PPP1R3GB7ZBB8 358 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 PES1O00541 588 aaKnown RBP4.89□□□□□ -1.63
C9orf72-203ENST00000380003 RTN3O95197 1032 aaPredicted RBP4.89□□□□□ -1.63
C9orf72-203ENST00000380003 LETM1O95202 739 aaPredicted RBP4.89□□□□□ -1.63
C9orf72-203ENST00000380003 ADH1CP00326 375 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 GABRG2P18507 467 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 NDUFV2P19404 249 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 SLC9A1P19634 815 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 FAM193AP78312 1265 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 FKBP3Q00688 224 aaKnown RBP4.89□□□□□ -1.63
C9orf72-203ENST00000380003 INCA1Q0VD86 236 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 TRIM61Q5EBN2 209 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 STPG1Q5TH74 334 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 SYPL2Q5VXT5 272 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 BSPRYQ5W0U4 402 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 KIAA1324Q6UXG2 1013 aaKnown RBP4.89□□□□□ -1.63
C9orf72-203ENST00000380003 CACNA2D4Q7Z3S7 1137 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 CIR1Q86X95 450 aaPredicted RBP4.89□□□□□ -1.63
C9orf72-203ENST00000380003 RGL4Q8IZJ4 473 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 TERB1Q8NA31 727 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 SECISBP2LQ93073 1101 aaKnown RBP4.89□□□□□ -1.63
C9orf72-203ENST00000380003 CCDC47Q96A33 483 aaKnown RBP4.89□□□□□ -1.63
C9orf72-203ENST00000380003 KIF9Q9HAQ2 790 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.89□□□□□ -1.63
C9orf72-203ENST00000380003 MARCH2Q9P0N8 246 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 AJAP1Q9UKB5 411 aaPredicted RBP4.89□□□□□ -1.63
C9orf72-203ENST00000380003 KNTC1P50748 2209 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 APC2O95996 2303 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 KMT2BQ9UMN6 2715 aaPredicted RBP4.89□□□□□ -1.63
C9orf72-203ENST00000380003 FAM237AA0A1B0GTK4 181 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 M0QYV0 167 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 BNIP3LO60238 219 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 APBB3O95704 486 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 APODP05090 189 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 ZDHHC11BP0C7U3 371 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 GTF2H1P32780 548 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 IL12RB1P42701 662 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 FMO5P49326 533 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 YWHAGP61981 247 aaKnown RBP eCLIP4.89□□□□□ -1.63
C9orf72-203ENST00000380003 RPS24P62847 133 aaKnown RBP4.89□□□□□ -1.63
C9orf72-203ENST00000380003 AMPD2Q01433 879 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 KCNH2Q12809 1159 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 BECN1Q14457 450 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 RNF43Q68DV7 783 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 LAIR1Q6GTX8 287 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 FMNL3Q8IVF7 1028 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 ETFBKMTQ8IXQ9 262 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 PHTF2Q8N3S3 785 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 CCDC150Q8NCX0 1101 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 FAM149B1Q96BN6 582 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 RPL10LQ96L21 214 aaKnown RBP4.89□□□□□ -1.63
C9orf72-203ENST00000380003 EDEM2Q9BV94 578 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 LRRC4Q9HBW1 653 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 TMPRSS4Q9NRS4 437 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 CYTH4Q9UIA0 394 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 DNMT3LQ9UJW3 386 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 NAALADL1Q9UQQ1 740 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 MYO16Q9Y6X6 1858 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 SPAARA0A1B0GVQ0 90 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 PLK4O00444 970 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 ATG13O75143 517 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 ZBED1O96006 694 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 NCAM1P13591 858 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 PAX3P23760 479 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 HLA-FP30511 346 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 GRIA2P42262 883 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 DGKGP49619 791 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 RNASE9P60153 205 aaKnown RBP4.89□□□□□ -1.63
C9orf72-203ENST00000380003 GAD2Q05329 585 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 ZNF268Q14587 947 aaPredicted RBP4.89□□□□□ -1.63
C9orf72-203ENST00000380003 CSRP2Q16527 193 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 FSCBQ5H9T9 825 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 IL31Q6EBC2 164 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 TTI2Q6NXR4 508 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 BHLHA9Q7RTU4 235 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 ZC3H3Q8IXZ2 948 aaKnown RBP4.89□□□□□ -1.63
C9orf72-203ENST00000380003 NETO2Q8NC67 525 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 HSPA12BQ96MM6 686 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms