RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 LARP4BQ92615 738 aaKnown RBP7.73□□□□□ -1.17
CDKL5-201ENST00000379989 RAD54LQ92698 747 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 VTI1AQ96AJ9 217 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 VPS35Q96QK1 796 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 AIFM2Q9BRQ8 373 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 UQCC2Q9BRT2 126 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 TDRD1Q9BXT4 1180 aaKnown RBP7.73□□□□□ -1.17
CDKL5-201ENST00000379989 MROQ9BYG7 248 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 HIPK3Q9H422 1215 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 TUFT1Q9NNX1 390 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 KCNN3Q9UGI6 736 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 DAPK2Q9UIK4 370 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 PTPN22Q9Y2R2 807 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 MTO1Q9Y2Z2 717 aaKnown RBP7.73□□□□□ -1.17
CDKL5-201ENST00000379989 SQORQ9Y6N5 450 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 ILVBLA1L0T0 632 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 SNTNA6NMZ2 147 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 CCRL2O00421 344 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 TNPO2O14787 897 aaKnown RBP7.73□□□□□ -1.17
CDKL5-201ENST00000379989 THAP12O43422 761 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 IDH3BO43837 385 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 GMNNO75496 209 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 PRKACAP17612 351 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 GAP43P17677 238 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 CA4P22748 312 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 WEE1P30291 646 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 ARL4CP56559 192 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 ATP6V0D1P61421 351 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 CDKL1Q00532 357 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 GBE1Q04446 702 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 ENPEPQ07075 957 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 ALCAMQ13740 583 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 NPTX1Q15818 432 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 NFE2Q16621 373 aaPredicted RBP7.73□□□□□ -1.17
CDKL5-201ENST00000379989 INSCQ1MX18 579 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 BBS9Q3SYG4 887 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 CENPPQ6IPU0 288 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 RHBDF2Q6PJF5 856 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 STXBP4Q6ZWJ1 553 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 IGFN1Q86VF2 1251 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 ELMOD2Q8IZ81 293 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 ZNF276Q8N554 614 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 KIAA0895Q8NCT3 520 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.73□□□□□ -1.17
CDKL5-201ENST00000379989 ALG3Q92685 438 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 KRT35Q92764 455 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 TP53INP1Q96A56 240 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 ALPK1Q96QP1 1244 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 SLC29A1Q99808 456 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 SLC2A11Q9BYW1 496 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 WDR11Q9BZH6 1224 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 TRABDQ9H4I3 376 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 BCAP29Q9UHQ4 241 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 CDC14AQ9UNH5 594 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 DIS3Q9Y2L1 958 aaKnown RBP7.73□□□□□ -1.17
CDKL5-201ENST00000379989 F5H6K3 240 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 SGTAO43765 313 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 DLDP09622 509 aaKnown RBP7.73□□□□□ -1.17
CDKL5-201ENST00000379989 OAZ1P54368 228 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 BASP1P80723 227 aaKnown RBP7.73□□□□□ -1.17
CDKL5-201ENST00000379989 PRKCEQ02156 737 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 BNIP3Q12983 259 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 DCAF15Q66K64 600 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 ZBTB46Q86UZ6 589 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 KIAA2013Q8IYS2 634 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 FEM1CQ96JP0 617 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 PLIN2Q99541 437 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 POP1Q99575 1024 aaKnown RBP7.73□□□□□ -1.17
CDKL5-201ENST00000379989 RUBCNLQ9H714 662 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.73□□□□□ -1.17
CDKL5-201ENST00000379989 OSGEPQ9NPF4 335 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 VPS45Q9NRW7 570 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 ABI2Q9NYB9 513 aaPredicted RBP7.73□□□□□ -1.17
CDKL5-201ENST00000379989 ZNF70Q9UC06 446 aaPredicted RBP7.73□□□□□ -1.17
CDKL5-201ENST00000379989 PCDHA12Q9UN75 941 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 ANGPTL3Q9Y5C1 460 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 PCDHA1Q9Y5I3 950 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 ADAMTSL1Q8N6G6 1762 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 A0A0A6YYK5 440 aaPredicted RBP7.72□□□□□ -1.17
CDKL5-201ENST00000379989 A0A1W2PPW3 197 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 H3BUI4 141 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 SNX2O60749 519 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 POLR2CP19387 275 aaPredicted RBP7.72□□□□□ -1.17
CDKL5-201ENST00000379989 M6PRP20645 277 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 CTNNA2P26232 953 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 GCAP28676 217 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 DSTNP60981 165 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 IRX4P78413 519 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 MRPS9P82933 396 aaKnown RBP7.72□□□□□ -1.17
CDKL5-201ENST00000379989 GALNT1Q10472 559 aaPredicted RBP7.72□□□□□ -1.17
CDKL5-201ENST00000379989 HIC1Q14526 733 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 QRICH1Q2TAL8 776 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 TKFCQ3LXA3 575 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 PLEKHA7Q6IQ23 1121 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 TMC5Q6UXY8 1006 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 GALNT7Q86SF2 657 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 ZC3H3Q8IXZ2 948 aaKnown RBP7.72□□□□□ -1.17
CDKL5-201ENST00000379989 LARGE2Q8N3Y3 721 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 HIPK4Q8NE63 616 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 RDM1Q8NG50 284 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms