RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 SESTD1Q86VW0 696 aa26.2■■□□□ 1.78
C9orf40-201ENST00000376854 NUDCD3Q8IVD9 361 aa26.2■■□□□ 1.78
C9orf40-201ENST00000376854 ANKRD13AQ8IZ07 590 aa26.2■■□□□ 1.78
C9orf40-201ENST00000376854 MPP5Q8N3R9 675 aa26.2■■□□□ 1.78
C9orf40-201ENST00000376854 GSDMBQ8TAX9 411 aa26.2■■□□□ 1.78
C9orf40-201ENST00000376854 SIGLEC10Q96LC7 697 aa26.2■■□□□ 1.78
C9orf40-201ENST00000376854 EBNA1BP2Q99848 306 aaKnown RBP26.2■■□□□ 1.78
C9orf40-201ENST00000376854 MRPL45Q9BRJ2 306 aaKnown RBP26.2■■□□□ 1.78
C9orf40-201ENST00000376854 PCMTD2Q9NV79 361 aa26.2■■□□□ 1.78
C9orf40-201ENST00000376854 SIRPGQ9P1W8 387 aa26.2■■□□□ 1.78
C9orf40-201ENST00000376854 CYB561D2O14569 222 aa26.19■■□□□ 1.78
C9orf40-201ENST00000376854 PAPSS1O43252 624 aaPredicted RBP26.19■■□□□ 1.78
C9orf40-201ENST00000376854 SESN3P58005 492 aa26.19■■□□□ 1.78
C9orf40-201ENST00000376854 CCDC6Q16204 474 aa26.19■■□□□ 1.78
C9orf40-201ENST00000376854 TSNAXIP1Q2TAA8 658 aa26.19■■□□□ 1.78
C9orf40-201ENST00000376854 ACSBG2Q5FVE4 666 aa26.19■■□□□ 1.78
C9orf40-201ENST00000376854 ARID3BQ8IVW6 561 aaPredicted RBP26.19■■□□□ 1.78
C9orf40-201ENST00000376854 KCNH4Q9UQ05 1017 aa26.19■■□□□ 1.78
C9orf40-201ENST00000376854 FAM159BA6NKW6 160 aa26.19■■□□□ 1.78
C9orf40-201ENST00000376854 SKAP2O75563 359 aaPredicted RBP26.19■■□□□ 1.78
C9orf40-201ENST00000376854 TFE3P19532 575 aaPredicted RBP26.19■■□□□ 1.78
C9orf40-201ENST00000376854 GBE1Q04446 702 aa26.19■■□□□ 1.78
C9orf40-201ENST00000376854 RCN1Q15293 331 aa26.19■■□□□ 1.78
C9orf40-201ENST00000376854 CMPK2Q5EBM0 449 aa26.19■■□□□ 1.78
C9orf40-201ENST00000376854 MROH9Q5TGP6 573 aa26.19■■□□□ 1.78
C9orf40-201ENST00000376854 CES4AQ5XG92 561 aa26.19■■□□□ 1.78
C9orf40-201ENST00000376854 LINC01465Q8N7H1 131 aa26.19■■□□□ 1.78
C9orf40-201ENST00000376854 NLRP7Q8WX94 980 aa26.19■■□□□ 1.78
C9orf40-201ENST00000376854 DNAJC9Q8WXX5 260 aa26.19■■□□□ 1.78
C9orf40-201ENST00000376854 CDCA5Q96FF9 252 aa26.19■■□□□ 1.78
C9orf40-201ENST00000376854 B3GNT5Q9BYG0 378 aa26.19■■□□□ 1.78
C9orf40-201ENST00000376854 MMADHCQ9H3L0 296 aaPredicted RBP26.19■■□□□ 1.78
C9orf40-201ENST00000376854 GCATO75600 419 aa26.18■■□□□ 1.78
C9orf40-201ENST00000376854 LGALS2P05162 132 aa26.18■■□□□ 1.78
C9orf40-201ENST00000376854 OCRLQ01968 901 aa26.18■■□□□ 1.78
C9orf40-201ENST00000376854 NDUFAF2Q8N183 169 aa26.18■■□□□ 1.78
C9orf40-201ENST00000376854 CFAP61Q8NHU2 1237 aa26.18■■□□□ 1.78
C9orf40-201ENST00000376854 SLC35F5Q8WV83 523 aa26.18■■□□□ 1.78
C9orf40-201ENST00000376854 OPTNQ96CV9 577 aa26.18■■□□□ 1.78
C9orf40-201ENST00000376854 ZNF395Q9H8N7 513 aaPredicted RBP26.18■■□□□ 1.78
C9orf40-201ENST00000376854 SLC10A2Q12908 348 aaPredicted RBP26.17■■□□□ 1.78
C9orf40-201ENST00000376854 HSF5Q4G112 596 aaPredicted RBP26.17■■□□□ 1.78
C9orf40-201ENST00000376854 TEX44Q53QW1 395 aa26.17■■□□□ 1.78
C9orf40-201ENST00000376854 CCDC33Q8N5R6 958 aa26.17■■□□□ 1.78
C9orf40-201ENST00000376854 OSBPL1AQ9BXW6 950 aa26.17■■□□□ 1.78
C9orf40-201ENST00000376854 DHX35Q9H5Z1 703 aaKnown RBP26.17■■□□□ 1.78
C9orf40-201ENST00000376854 ARHGEF4Q9NR80 690 aa26.17■■□□□ 1.78
C9orf40-201ENST00000376854 HESX1Q9UBX0 185 aa26.17■■□□□ 1.78
C9orf40-201ENST00000376854 CORO1CQ9ULV4 474 aaPredicted RBP26.17■■□□□ 1.78
C9orf40-201ENST00000376854 SNX9Q9Y5X1 595 aa26.17■■□□□ 1.78
C9orf40-201ENST00000376854 HMX2A2RU54 273 aa26.17■■□□□ 1.78
C9orf40-201ENST00000376854 EIF4E1BA6NMX2 242 aaKnown RBP26.17■■□□□ 1.78
C9orf40-201ENST00000376854 ZNF487B1APH4 448 aa26.17■■□□□ 1.78
C9orf40-201ENST00000376854 TSPAN1O60635 241 aa26.17■■□□□ 1.78
C9orf40-201ENST00000376854 GABBR2O75899 941 aa26.17■■□□□ 1.78
C9orf40-201ENST00000376854 KRT36O76013 467 aa26.17■■□□□ 1.78
C9orf40-201ENST00000376854 SETSIPP0DME0 302 aa26.17■■□□□ 1.78
C9orf40-201ENST00000376854 TPSB2P20231 275 aa26.17■■□□□ 1.78
C9orf40-201ENST00000376854 L1CAMP32004 1257 aa26.17■■□□□ 1.78
C9orf40-201ENST00000376854 TPSAB1Q15661 275 aa26.17■■□□□ 1.78
C9orf40-201ENST00000376854 MUM1Q2TAK8 710 aa26.17■■□□□ 1.78
C9orf40-201ENST00000376854 CAPRIN2Q6IMN6 1127 aaKnown RBP26.17■■□□□ 1.78
C9orf40-201ENST00000376854 NT5DC4Q86YG4 428 aa26.17■■□□□ 1.78
C9orf40-201ENST00000376854 AFG1LQ8WV93 481 aa26.17■■□□□ 1.78
C9orf40-201ENST00000376854 SPDL1Q96EA4 605 aa26.17■■□□□ 1.78
C9orf40-201ENST00000376854 PCDHA11Q9Y5I1 949 aa26.17■■□□□ 1.78
C9orf40-201ENST00000376854 A6NJR5 290 aa26.16■■□□□ 1.78
C9orf40-201ENST00000376854 KITP10721 976 aa26.16■■□□□ 1.78
C9orf40-201ENST00000376854 ACADSP16219 412 aa26.16■■□□□ 1.78
C9orf40-201ENST00000376854 CPA2P48052 419 aa26.16■■□□□ 1.78
C9orf40-201ENST00000376854 LMNTD2Q8IXW0 634 aa26.16■■□□□ 1.78
C9orf40-201ENST00000376854 DEPDC1BQ8WUY9 529 aa26.16■■□□□ 1.78
C9orf40-201ENST00000376854 WDR60Q8WVS4 1066 aa26.16■■□□□ 1.78
C9orf40-201ENST00000376854 PPARGC1AQ9UBK2 798 aaKnown RBP26.16■■□□□ 1.78
C9orf40-201ENST00000376854 SBF1O95248 1867 aa26.16■■□□□ 1.78
C9orf40-201ENST00000376854 CRHR1P34998 444 aa26.16■■□□□ 1.78
C9orf40-201ENST00000376854 ARHGAP1Q07960 439 aa26.16■■□□□ 1.78
C9orf40-201ENST00000376854 DPYSL2Q16555 572 aa26.16■■□□□ 1.78
C9orf40-201ENST00000376854 ANO7Q6IWH7 933 aa26.16■■□□□ 1.78
C9orf40-201ENST00000376854 SMC1BQ8NDV3 1235 aa26.16■■□□□ 1.78
C9orf40-201ENST00000376854 WWP1Q9H0M0 922 aa26.16■■□□□ 1.78
C9orf40-201ENST00000376854 MARCOQ9UEW3 520 aaPredicted RBP26.16■■□□□ 1.78
C9orf40-201ENST00000376854 CAPN14A8MX76 684 aa26.15■■□□□ 1.78
C9orf40-201ENST00000376854 NVLO15381 856 aaKnown RBP26.15■■□□□ 1.78
C9orf40-201ENST00000376854 CYP2C8P10632 490 aa26.15■■□□□ 1.78
C9orf40-201ENST00000376854 ZFXP17010 805 aaPredicted RBP26.15■■□□□ 1.78
C9orf40-201ENST00000376854 GCKP35557 465 aa26.15■■□□□ 1.78
C9orf40-201ENST00000376854 PGM1P36871 562 aa26.15■■□□□ 1.78
C9orf40-201ENST00000376854 VHLP40337 213 aa26.15■■□□□ 1.78
C9orf40-201ENST00000376854 GRIA1P42261 906 aa26.15■■□□□ 1.78
C9orf40-201ENST00000376854 SERPINB9P50453 376 aa26.15■■□□□ 1.78
C9orf40-201ENST00000376854 ATXN1P54253 815 aaKnown RBP26.15■■□□□ 1.78
C9orf40-201ENST00000376854 SNX16P57768 344 aa26.15■■□□□ 1.78
C9orf40-201ENST00000376854 PPIL2Q13356 520 aa26.15■■□□□ 1.78
C9orf40-201ENST00000376854 KCNT2Q6UVM3 1135 aa26.15■■□□□ 1.78
C9orf40-201ENST00000376854 CRLF3Q8IUI8 442 aa26.15■■□□□ 1.78
C9orf40-201ENST00000376854 ARHGAP24Q8N264 748 aa26.15■■□□□ 1.78
C9orf40-201ENST00000376854 MAGEB5Q9BZ81 275 aa26.15■■□□□ 1.78
C9orf40-201ENST00000376854 XAB2Q9HCS7 855 aaKnown RBP26.15■■□□□ 1.78
C9orf40-201ENST00000376854 NMRK1Q9NWW6 199 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms