RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 TCEA3O75764 348 aa17.45■□□□□ 0.38
HLA-A-202ENST00000376806 TMEM63AO94886 807 aa17.45■□□□□ 0.38
HLA-A-202ENST00000376806 ZBED1O96006 694 aa17.45■□□□□ 0.38
HLA-A-202ENST00000376806 LTFP02788 710 aa17.45■□□□□ 0.38
HLA-A-202ENST00000376806 IVLP07476 585 aa17.45■□□□□ 0.38
HLA-A-202ENST00000376806 USP17L7P0C7H9 530 aa17.45■□□□□ 0.38
HLA-A-202ENST00000376806 CCL5P13501 91 aa17.45■□□□□ 0.38
HLA-A-202ENST00000376806 SELPP16109 830 aa17.45■□□□□ 0.38
HLA-A-202ENST00000376806 ARL4AP40617 200 aa17.45■□□□□ 0.38
HLA-A-202ENST00000376806 BASP1P80723 227 aaKnown RBP17.45■□□□□ 0.38
HLA-A-202ENST00000376806 DEUP1Q05D60 604 aa17.45■□□□□ 0.38
HLA-A-202ENST00000376806 FASTKD3Q14CZ7 662 aaKnown RBP17.45■□□□□ 0.38
HLA-A-202ENST00000376806 HIF1AQ16665 826 aa17.45■□□□□ 0.38
HLA-A-202ENST00000376806 ZSCAN26Q16670 478 aa17.45■□□□□ 0.38
HLA-A-202ENST00000376806 NOMO2Q5JPE7 1267 aa17.45■□□□□ 0.38
HLA-A-202ENST00000376806 BHLHA9Q7RTU4 235 aa17.45■□□□□ 0.38
HLA-A-202ENST00000376806 ZNF280BQ86YH2 543 aa17.45■□□□□ 0.38
HLA-A-202ENST00000376806 CDKL3Q8IVW4 592 aaPredicted RBP17.45■□□□□ 0.38
HLA-A-202ENST00000376806 THEM5Q8N1Q8 247 aa17.45■□□□□ 0.38
HLA-A-202ENST00000376806 PYROXD2Q8N2H3 581 aa17.45■□□□□ 0.38
HLA-A-202ENST00000376806 TAB3Q8N5C8 712 aaPredicted RBP17.45■□□□□ 0.38
HLA-A-202ENST00000376806 TMEM209Q96SK2 561 aa17.45■□□□□ 0.38
HLA-A-202ENST00000376806 FTHL17Q9BXU8 183 aa17.45■□□□□ 0.38
HLA-A-202ENST00000376806 DMAP1Q9NPF5 467 aaPredicted RBP17.45■□□□□ 0.38
HLA-A-202ENST00000376806 SCN5AQ14524 2016 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 GOLGA8MH3BSY2 632 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 CAPN9O14815 690 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 DDHD2O94830 711 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 MAP3K6O95382 1288 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 GOT1P17174 413 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 BDNFP23560 247 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 LSP1P33241 339 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 IFI35P80217 286 aaPredicted RBP17.44■□□□□ 0.38
HLA-A-202ENST00000376806 TSPY1Q01534 308 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 GBE1Q04446 702 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 GAD2Q05329 585 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 NME3Q13232 169 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 PKN2Q16513 984 aaKnown RBP17.44■□□□□ 0.38
HLA-A-202ENST00000376806 NCBP2-AS2Q69YL0 99 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 SLC7A14Q8TBB6 771 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 ZNF333Q96JL9 665 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 RNF208Q9H0X6 261 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 CNOT10Q9H9A5 744 aaKnown RBP17.44■□□□□ 0.38
HLA-A-202ENST00000376806 PAK6Q9NQU5 681 aaPredicted RBP17.44■□□□□ 0.38
HLA-A-202ENST00000376806 PIGVQ9NUD9 493 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 A0A087WUV0 522 aaPredicted RBP17.44■□□□□ 0.38
HLA-A-202ENST00000376806 TMEM189-UBE2V1I3L0A0 370 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 RBL1P28749 1068 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 NR2C2P49116 596 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 ARL4CP56559 192 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 PDIA2Q13087 525 aaKnown RBP17.44■□□□□ 0.38
HLA-A-202ENST00000376806 XRCC4Q13426 336 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 STAT4Q14765 748 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 MAPRE1Q15691 268 aaKnown RBP17.44■□□□□ 0.38
HLA-A-202ENST00000376806 LRRTM3Q86VH5 581 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 COLGALT2Q8IYK4 626 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 ZBED8Q8IZ13 594 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 DEFB118Q96PH6 123 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 QKIQ96PU8 341 aaKnown RBP eCLIP17.44■□□□□ 0.38
HLA-A-202ENST00000376806 TBC1D13Q9NVG8 400 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 PAK5Q9P286 719 aa17.44■□□□□ 0.38
HLA-A-202ENST00000376806 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.44■□□□□ 0.38
HLA-A-202ENST00000376806 PLXNA3P51805 1871 aa17.43■□□□□ 0.38
HLA-A-202ENST00000376806 TCRBV7S3A2A0A539 114 aa17.43■□□□□ 0.38
HLA-A-202ENST00000376806 H3BRJ5 948 aa17.43■□□□□ 0.38
HLA-A-202ENST00000376806 ALOX15BO15296 676 aa17.43■□□□□ 0.38
HLA-A-202ENST00000376806 AMPD1P23109 780 aa17.43■□□□□ 0.38
HLA-A-202ENST00000376806 CDK7P50613 346 aa17.43■□□□□ 0.38
HLA-A-202ENST00000376806 SLC45A4Q5BKX6 768 aa17.43■□□□□ 0.38
HLA-A-202ENST00000376806 EFHC2Q5JST6 749 aa17.43■□□□□ 0.38
HLA-A-202ENST00000376806 FAM126BQ8IXS8 530 aa17.43■□□□□ 0.38
HLA-A-202ENST00000376806 RNF139Q8WU17 664 aa17.43■□□□□ 0.38
HLA-A-202ENST00000376806 IRGQQ8WZA9 623 aa17.43■□□□□ 0.38
HLA-A-202ENST00000376806 ARHGEF4Q9NR80 690 aa17.43■□□□□ 0.38
HLA-A-202ENST00000376806 TMPRSS4Q9NRS4 437 aa17.43■□□□□ 0.38
HLA-A-202ENST00000376806 XPO7Q9UIA9 1087 aaKnown RBP17.43■□□□□ 0.38
HLA-A-202ENST00000376806 MKI67P46013 3256 aaKnown RBP17.42■□□□□ 0.38
HLA-A-202ENST00000376806 BANF1O75531 89 aa17.42■□□□□ 0.38
HLA-A-202ENST00000376806 NCAM1P13591 858 aa17.42■□□□□ 0.38
HLA-A-202ENST00000376806 MMP13P45452 471 aa17.42■□□□□ 0.38
HLA-A-202ENST00000376806 AIF1P55008 147 aa17.42■□□□□ 0.38
HLA-A-202ENST00000376806 YWHAHQ04917 246 aaPredicted RBP17.42■□□□□ 0.38
HLA-A-202ENST00000376806 SLC10A2Q12908 348 aaPredicted RBP17.42■□□□□ 0.38
HLA-A-202ENST00000376806 KCNJ11Q14654 390 aa17.42■□□□□ 0.38
HLA-A-202ENST00000376806 HP1BP3Q5SSJ5 553 aaPredicted RBP17.42■□□□□ 0.38
HLA-A-202ENST00000376806 CCDC13Q8IYE1 715 aa17.42■□□□□ 0.38
HLA-A-202ENST00000376806 SCML4Q8N228 414 aa17.42■□□□□ 0.38
HLA-A-202ENST00000376806 ADAM32Q8TC27 787 aa17.42■□□□□ 0.38
HLA-A-202ENST00000376806 NTAN1Q96AB6 310 aa17.42■□□□□ 0.38
HLA-A-202ENST00000376806 ARMC5Q96C12 935 aa17.42■□□□□ 0.38
HLA-A-202ENST00000376806 PGAP3Q96FM1 320 aaPredicted RBP17.42■□□□□ 0.38
HLA-A-202ENST00000376806 SLC9A7Q96T83 725 aa17.42■□□□□ 0.38
HLA-A-202ENST00000376806 CCDC77Q9BR77 488 aa17.42■□□□□ 0.38
HLA-A-202ENST00000376806 SEZ6LQ9BYH1 1024 aa17.42■□□□□ 0.38
HLA-A-202ENST00000376806 PRDM16Q9HAZ2 1276 aa17.42■□□□□ 0.38
HLA-A-202ENST00000376806 WDR6Q9NNW5 1121 aaKnown RBP17.42■□□□□ 0.38
HLA-A-202ENST00000376806 PNPLA8Q9NP80 782 aa17.42■□□□□ 0.38
HLA-A-202ENST00000376806 ETNK2Q9NVF9 386 aa17.42■□□□□ 0.38
HLA-A-202ENST00000376806 TMEM161AQ9NX61 479 aa17.42■□□□□ 0.38
HLA-A-202ENST00000376806 RRN3Q9NYV6 651 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms