RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 C6orf163Q5TEZ5 329 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 SLC27A1Q6PCB7 646 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 METTL23Q86XA0 190 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 OR52K1Q8NGK4 314 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 PAAF1Q9BRP4 392 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 THTPAQ9BU02 230 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 FSD1LQ9BXM9 530 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 ZNF518BQ9C0D4 1074 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 MYLK2Q9H1R3 596 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 MANSC1Q9H8J5 431 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 C20orf96Q9NUD7 363 aaPredicted RBP12.07□□□□□ -0.48
DDR1-227ENST00000376570 SYNPO2Q9UMS6 1093 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 SMIM28A0A1B0GU29 152 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 HSPA4LO95757 839 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 GSTA1P08263 222 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 GSTA2P09210 222 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 CSE1LP55060 971 aaKnown RBP12.07□□□□□ -0.48
DDR1-227ENST00000376570 MCL1Q07820 350 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 BTBD8Q5XKL5 378 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 KIAA1841Q6NSI8 718 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 SNX31Q8N9S9 440 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 ST13P5Q8NFI4 369 aaPredicted RBP12.07□□□□□ -0.48
DDR1-227ENST00000376570 NAT14Q8WUY8 206 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 NIFKQ9BYG3 293 aaKnown RBP12.07□□□□□ -0.48
DDR1-227ENST00000376570 ABHD16BQ9H3Z7 469 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 SPATS2LQ9NUQ6 558 aaKnown RBP12.07□□□□□ -0.48
DDR1-227ENST00000376570 PHGDHO43175 533 aaKnown RBP12.07□□□□□ -0.48
DDR1-227ENST00000376570 PPIL2Q13356 520 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 SOWAHAQ2M3V2 549 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 TSNAXIP1Q2TAA8 658 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 KLHL38Q2WGJ6 581 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 MGAT5BQ3V5L5 792 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 EXOC8Q8IYI6 725 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 TNIP3Q96KP6 325 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 SENP8Q96LD8 212 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 PRDM12Q9H4Q4 367 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 ZNF358Q9NW07 568 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 STAP1Q9ULZ2 295 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 SLC27A5Q9Y2P5 690 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 LAMB2P55268 1798 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 MYBPHLA2RUH7 354 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 A8MX80 341 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 CILPO75339 1184 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 DNAJB2P25686 324 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 TSTA3Q13630 321 aaPredicted RBP12.06□□□□□ -0.48
DDR1-227ENST00000376570 FASTKD1Q53R41 847 aaKnown RBP12.06□□□□□ -0.48
DDR1-227ENST00000376570 SYPL2Q5VXT5 272 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 CCHCR1Q8TD31 782 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 TMEM40Q8WWA1 233 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 ZBED3Q96IU2 234 aaPredicted RBP12.06□□□□□ -0.48
DDR1-227ENST00000376570 ST6GALNAC4Q9H4F1 302 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 GTSE1Q9NYZ3 720 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 MPP6Q9NZW5 540 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 WDR35Q9P2L0 1181 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 TLK1Q9UKI8 766 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 TCRBV9S1A1TA0A576 114 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 RNF103O00237 685 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 CES2O00748 559 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 SNX3O60493 162 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 MCF2P10911 925 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 POU5F1Q01860 360 aaKnown RBP12.06□□□□□ -0.48
DDR1-227ENST00000376570 CCDC14Q49A88 953 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 DEFB128Q7Z7B8 93 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 TTC7BQ86TV6 843 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 RFWD2Q8NHY2 731 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 TTC25Q96NG3 672 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 WDCPQ9H6R7 721 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 PCDH9Q9HC56 1237 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 UBQLN1Q9UMX0 589 aaKnown RBP12.06□□□□□ -0.48
DDR1-227ENST00000376570 CDY2AQ9Y6F7 541 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 EVPLQ92817 2033 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 COL4A5P29400 1685 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 A0A0G2JLL6 359 aaPredicted RBP12.06□□□□□ -0.48
DDR1-227ENST00000376570 F8W810 466 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 KRT38O76015 456 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 MMP3P08254 477 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 NQO1P15559 274 aaKnown RBP12.06□□□□□ -0.48
DDR1-227ENST00000376570 TNFRSF8P28908 595 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 PSEN2P49810 448 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 WDR4P57081 412 aaKnown RBP12.06□□□□□ -0.48
DDR1-227ENST00000376570 SLC6A3Q01959 620 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 FSCN1Q16658 493 aaKnown RBP12.06□□□□□ -0.48
DDR1-227ENST00000376570 SWT1Q5T5J6 900 aaKnown RBP12.06□□□□□ -0.48
DDR1-227ENST00000376570 RASIP1Q5U651 963 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 FOXR2Q6PJQ5 311 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 PRRT2Q7Z6L0 340 aaPredicted RBP12.06□□□□□ -0.48
DDR1-227ENST00000376570 ZCCHC9Q8N567 271 aaKnown RBP12.06□□□□□ -0.48
DDR1-227ENST00000376570 PPFIBP2Q8ND30 876 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 SKA2Q8WVK7 121 aaPredicted RBP12.06□□□□□ -0.48
DDR1-227ENST00000376570 MIEF2Q96C03 454 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 PGM2Q96G03 612 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 SMPD4Q9NXE4 827 aa12.06□□□□□ -0.48
DDR1-227ENST00000376570 CXorf49A8MYA2 514 aaPredicted RBP12.05□□□□□ -0.48
DDR1-227ENST00000376570 B2RBV5 119 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 CLGNO14967 610 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 NSUN2Q08J23 767 aaKnown RBP eCLIP12.05□□□□□ -0.48
DDR1-227ENST00000376570 VSTM1Q6UX27 236 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 CRLF3Q8IUI8 442 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 FITM2Q8N6M3 262 aa12.05□□□□□ -0.48
DDR1-227ENST00000376570 TFB1MQ8WVM0 346 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms