RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 WDR27A2RRH5 827 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 EVPLLA8MZ36 301 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 KCNK1O00180 336 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 RPS12P25398 132 aaKnown RBP11.86□□□□□ -0.51
PTCH1-203ENST00000375274 SKIV2L2P42285 1042 aaKnown RBP11.86□□□□□ -0.51
PTCH1-203ENST00000375274 BST2Q10589 180 aaKnown RBP11.86□□□□□ -0.51
PTCH1-203ENST00000375274 KRT33BQ14525 404 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 TRIM16LQ309B1 348 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 CCDC92Q53HC0 331 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-203ENST00000375274 RRM2BQ7LG56 351 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 CATSPER2Q96P56 530 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 TEX12Q9BXU0 123 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 NCAM2O15394 837 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 ARHGEF9O43307 516 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 KRT8P05787 483 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 PAEPP09466 180 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 ME2P23368 584 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 MGAT1P26572 445 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 NME5P56597 212 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 CHRNB3Q05901 458 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 SGO1Q5FBB7 561 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 WDR18Q9BV38 432 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 MROH7Q68CQ1 1323 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 MST1RQ04912 1400 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 FAM237BA0A1B0GVD1 139 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 HEATR9A2RTY3 570 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 TBC1D12O60347 775 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 PIAS1O75925 651 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 ATP6V1E1P36543 226 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 PLIN5Q00G26 463 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 EN1Q05925 392 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-203ENST00000375274 KRT72Q14CN4 511 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 VEPH1Q14D04 833 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 CCDC85BQ15834 202 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-203ENST00000375274 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.86□□□□□ -0.51
PTCH1-203ENST00000375274 FAM83AQ86UY5 434 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 CCDC60Q8IWA6 550 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-203ENST00000375274 RIN3Q8TB24 985 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 PYDC1Q8WXC3 89 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 TRAPPC9Q96Q05 1148 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 TMEM79Q9BSE2 394 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 RNF181Q9P0P0 153 aa11.86□□□□□ -0.51
PTCH1-203ENST00000375274 COL5A2P05997 1499 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-203ENST00000375274 ZC3H4Q9UPT8 1303 aaKnown RBP11.86□□□□□ -0.51
PTCH1-203ENST00000375274 MAGEB16A2A368 324 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 TNFAIP8O95379 198 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 VTNP04004 478 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 FECHP22830 423 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 AMPD1P23109 780 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 RPL22P35268 128 aaKnown RBP11.85□□□□□ -0.51
PTCH1-203ENST00000375274 C16orf46Q6P387 395 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 TRABD2AQ86V40 505 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 ALLCQ8N6M5 410 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 TMEM161BQ8NDZ6 487 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 OPTNQ96CV9 577 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 CDRT15Q96T59 188 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 KATNAL1Q9BW62 490 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 FAM192AQ9GZU8 254 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 ASB7Q9H672 318 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 ARHGAP23Q9P227 1491 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 STX7O15400 261 aaKnown RBP11.85□□□□□ -0.51
PTCH1-203ENST00000375274 B3GAT3O94766 335 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 NR2C2P49116 596 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 CDK7P50613 346 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 BST1Q10588 318 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 SNX32Q86XE0 403 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 SCUBE3Q8IX30 993 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 DCUN1D1Q96GG9 259 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 CPB2Q96IY4 423 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 TADA2AO75478 443 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 MICAL2O94851 1124 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 MPOP05164 745 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 TGFB3P10600 412 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 GTF2H3Q13889 308 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 NFYCQ13952 458 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 ZRANB3Q5FWF4 1079 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 ZC3H12BQ5HYM0 836 aaKnown RBP11.85□□□□□ -0.51
PTCH1-203ENST00000375274 GRTP1Q5TC63 336 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 CES3Q6UWW8 571 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 APTXQ7Z2E3 356 aaKnown RBP11.85□□□□□ -0.51
PTCH1-203ENST00000375274 OR6Y1Q8NGX8 325 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 DIS3LQ8TF46 1054 aaKnown RBP11.85□□□□□ -0.51
PTCH1-203ENST00000375274 ACSS3Q9H6R3 686 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 TEKT2Q9UIF3 430 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 SORCS3Q9UPU3 1222 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 VPS9D1Q9Y2B5 631 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 ROBO3Q96MS0 1386 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 A0A0B4J269 797 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 NR5A2O00482 541 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 ACKR2O00590 384 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 C2CD2LO14523 706 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 EDF1O60869 148 aaKnown RBP11.85□□□□□ -0.51
PTCH1-203ENST00000375274 KRT36O76013 467 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 HMGCRP04035 888 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 SERPINB1P30740 379 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 CDH17Q12864 832 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 FBXO47Q5MNV8 452 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 ZFP1Q6P2D0 407 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 CCDC81Q6ZN84 652 aa11.85□□□□□ -0.51
PTCH1-203ENST00000375274 MAML3Q96JK9 1138 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms