RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 MRPL39Q9NYK5 338 aaKnown RBP9.36□□□□□ -0.91
UBR4-201ENST00000375218 SPEGQ15772 3267 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 H7BY64 318 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 PRODHO43272 600 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 TBC1D4O60343 1298 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 CTDNEP1O95476 244 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 STAT5BP51692 787 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 METAP1P53582 386 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 RPA4Q13156 261 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 PTPAQ15257 358 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 PCGF3Q3KNV8 242 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 CWF19L1Q69YN2 538 aaKnown RBP9.36□□□□□ -0.91
UBR4-201ENST00000375218 CYP4V2Q6ZWL3 525 aaPredicted RBP9.36□□□□□ -0.91
UBR4-201ENST00000375218 TAGAPQ8N103 731 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 PPM1KQ8N3J5 372 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 ZNF507Q8TCN5 953 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 OTUD5Q96G74 571 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 SLC35D1Q9NTN3 355 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 SOHLH2Q9NX45 425 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 SLC39A1Q9NY26 324 aa9.36□□□□□ -0.91
UBR4-201ENST00000375218 NEDD4P46934 1319 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 PCDHGA12O60330 932 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 GCH1P30793 250 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 ARSDP51689 593 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 EPHB4P54760 987 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 CTSWP56202 376 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 SF3B4Q15427 424 aaKnown RBP eCLIP9.35□□□□□ -0.912e-6■■■□□ 17.9
UBR4-201ENST00000375218 FIGNQ5HY92 759 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 SNAP47Q5SQN1 464 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 ATL3Q6DD88 541 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 THNSL1Q8IYQ7 743 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 DENND6BQ8NEG7 585 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 HDAC10Q969S8 669 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 KCNC2Q96PR1 638 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 CIB1Q99828 191 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 SH2D4AQ9H788 454 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 AKT3Q9Y243 479 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 KLHL20Q9Y2M5 609 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 DTNAQ9Y4J8 743 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 PCDHGA9Q9Y5G4 932 aaKnown RBP9.35□□□□□ -0.91
UBR4-201ENST00000375218 PCDHGA8Q9Y5G5 932 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 PCDHGA7Q9Y5G6 932 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 PCDHGA6Q9Y5G7 932 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 POM121BA6NF01 834 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 ERVV-1B6SEH8 477 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 E9PBE3 544 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 TNPO2O14787 897 aaKnown RBP9.35□□□□□ -0.91
UBR4-201ENST00000375218 PTP4A3O75365 173 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 RNF8O76064 485 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 FGF18O76093 207 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 ODC1P11926 461 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 RPA1P27694 616 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 GDI2P50395 445 aaKnown RBP9.35□□□□□ -0.91
UBR4-201ENST00000375218 GATMP50440 423 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 ZNF445P59923 1031 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 EIF3EP60228 445 aaKnown RBP9.35□□□□□ -0.91
UBR4-201ENST00000375218 TLE2Q04725 743 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 SGCAQ16586 387 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 GTF2IRD2BQ6EKJ0 949 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 TRAT1Q6PIZ9 186 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 PRR23CQ6ZRP0 262 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 GTF2IRD2Q86UP8 949 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 CMTR2Q8IYT2 770 aaKnown RBP9.35□□□□□ -0.91
UBR4-201ENST00000375218 BBS5Q8N3I7 341 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 OR8K3Q8NH51 312 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 TGFBRAP1Q8WUH2 860 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 ZKSCAN4Q969J2 545 aaPredicted RBP9.35□□□□□ -0.91
UBR4-201ENST00000375218 WRNIP1Q96S55 665 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 GORASP1Q9BQQ3 440 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 MLPHQ9BV36 600 aaPredicted RBP9.35□□□□□ -0.91
UBR4-201ENST00000375218 CPA4Q9UI42 421 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 SOX13Q9UN79 622 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 PRUNE2Q8WUY3 3088 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 PHLPP2Q6ZVD8 1323 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 ARFGEF1Q9Y6D6 1849 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 A8MX80 341 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 ECDO95905 644 aaPredicted RBP9.35□□□□□ -0.91
UBR4-201ENST00000375218 CTSSP25774 331 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 ERFP50548 548 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 NFIXQ14938 502 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 CCDC153Q494R4 210 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 SCYL2Q6P3W7 929 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 SV2BQ7L1I2 683 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 NKD1Q969G9 470 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 DACT3Q96B18 629 aaPredicted RBP9.35□□□□□ -0.91
UBR4-201ENST00000375218 SLC22A18Q96BI1 424 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 AHCYL2Q96HN2 611 aaKnown RBP9.35□□□□□ -0.91
UBR4-201ENST00000375218 HES6Q96HZ4 224 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 PGBD1Q96JS3 809 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 PYM1Q9BRP8 204 aaKnown RBP9.35□□□□□ -0.91
UBR4-201ENST00000375218 B3GNT5Q9BYG0 378 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 SBF1O95248 1867 aa9.35□□□□□ -0.91
UBR4-201ENST00000375218 HTR3EA5X5Y0 456 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 AQP12BA6NM10 295 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 HSBP1L1C9JCN9 74 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 CDK2AP1O14519 115 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 SCAMP2O15127 329 aaKnown RBP9.34□□□□□ -0.91
UBR4-201ENST00000375218 DYNC1LI2O43237 492 aaPredicted RBP9.34□□□□□ -0.91
UBR4-201ENST00000375218 TPOP07202 933 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 SLURP2P0DP57 97 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms