RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 BMP8BP34820 402 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 CRYBB1P53674 252 aaPredicted RBP12.56□□□□□ -0.4
HMGCL-202ENST00000374487 GPX6P59796 221 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 SV2CQ496J9 727 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 MSS51Q4VC12 460 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 TMCO2Q7Z6W1 182 aaPredicted RBP12.56□□□□□ -0.4
HMGCL-202ENST00000374487 TDHQ8IZJ6 230 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 CRYBG2Q8N1P7 616 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 TMEM199Q8N511 208 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 KBTBD7Q8WVZ9 684 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 KHSRPQ92945 711 aaKnown RBP eCLIP12.56□□□□□ -0.4
HMGCL-202ENST00000374487 TSPAN18Q96SJ8 248 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 SNRNP25Q9BV90 132 aaKnown RBP12.56□□□□□ -0.4
HMGCL-202ENST00000374487 KDM4CQ9H3R0 1056 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 TRABDQ9H4I3 376 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 GOLGA2P5Q9HBQ8 144 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 PCDH18Q9HCL0 1135 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 GDAP2Q9NXN4 497 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 CCT8L1PA6NM43 557 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 MDM4O15151 490 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 SPTLC1O15269 473 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 TMEM63AO94886 807 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 FGFR1P11362 822 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 KCNE1P15382 129 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 IL4RP24394 825 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 GBP2P32456 591 aaPredicted RBP12.56□□□□□ -0.4
HMGCL-202ENST00000374487 ACADSBP45954 432 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 HDAC4P56524 1084 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 TWF2Q6IBS0 349 aaKnown RBP12.56□□□□□ -0.4
HMGCL-202ENST00000374487 LRRC8DQ7L1W4 858 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 SLC2A14Q8TDB8 520 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 CLEC4CQ8WTT0 213 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 FAF2Q96CS3 445 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 TNIP3Q96KP6 325 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 MAGEB18Q96M61 343 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 RAB6BQ9NRW1 208 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 PAK5Q9P286 719 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 RABGEF1Q9UJ41 708 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 IPPQ9Y573 584 aa12.56□□□□□ -0.4
HMGCL-202ENST00000374487 CLUHO75153 1309 aa12.55□□□□□ -0.4
HMGCL-202ENST00000374487 SNX3O60493 162 aa12.55□□□□□ -0.4
HMGCL-202ENST00000374487 GABBR2O75899 941 aa12.55□□□□□ -0.4
HMGCL-202ENST00000374487 ZBED1O96006 694 aa12.55□□□□□ -0.4
HMGCL-202ENST00000374487 CHRNA1P02708 482 aa12.55□□□□□ -0.4
HMGCL-202ENST00000374487 SELPP16109 830 aa12.55□□□□□ -0.4
HMGCL-202ENST00000374487 SLC8A3P57103 927 aa12.55□□□□□ -0.4
HMGCL-202ENST00000374487 CA9Q16790 459 aa12.55□□□□□ -0.4
HMGCL-202ENST00000374487 KLHL38Q2WGJ6 581 aa12.55□□□□□ -0.4
HMGCL-202ENST00000374487 SYCP2LQ5T4T6 812 aa12.55□□□□□ -0.4
HMGCL-202ENST00000374487 SLC26A9Q7LBE3 791 aa12.55□□□□□ -0.4
HMGCL-202ENST00000374487 PACS2Q86VP3 889 aa12.55□□□□□ -0.4
HMGCL-202ENST00000374487 ADGRF2Q8IZF7 708 aa12.55□□□□□ -0.4
HMGCL-202ENST00000374487 NME8Q8N427 588 aa12.55□□□□□ -0.4
HMGCL-202ENST00000374487 PCDH19Q8TAB3 1148 aa12.55□□□□□ -0.4
HMGCL-202ENST00000374487 FBF1Q8TES7 1133 aa12.55□□□□□ -0.4
HMGCL-202ENST00000374487 CCT6BQ92526 530 aa12.55□□□□□ -0.4
HMGCL-202ENST00000374487 ZNF670Q9BS34 389 aa12.55□□□□□ -0.4
HMGCL-202ENST00000374487 SEZ6LQ9BYH1 1024 aa12.55□□□□□ -0.4
HMGCL-202ENST00000374487 ADAM33Q9BZ11 813 aa12.55□□□□□ -0.4
HMGCL-202ENST00000374487 DHX35Q9H5Z1 703 aaKnown RBP12.55□□□□□ -0.4
HMGCL-202ENST00000374487 IL23AQ9NPF7 189 aa12.55□□□□□ -0.4
HMGCL-202ENST00000374487 SMG5Q9UPR3 1016 aaKnown RBP12.55□□□□□ -0.4
HMGCL-202ENST00000374487 USP15Q9Y4E8 981 aaPredicted RBP12.55□□□□□ -0.4
HMGCL-202ENST00000374487 SCN1AP35498 2009 aa12.55□□□□□ -0.4
HMGCL-202ENST00000374487 CFAP69A5D8W1 941 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 E7ESA3 106 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 SUN1O94901 812 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 TFE3P19532 575 aaPredicted RBP12.54□□□□□ -0.4
HMGCL-202ENST00000374487 MSH2P43246 934 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 PTPN9P43378 593 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 BFSP2Q13515 415 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 RASA2Q15283 850 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 ZKSCAN8Q15776 578 aaPredicted RBP12.54□□□□□ -0.4
HMGCL-202ENST00000374487 EFHC2Q5JST6 749 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 UBXN11Q5T124 520 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 SLC9A4Q6AI14 798 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 VSIG1Q86XK7 387 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 C4orf33Q8N1A6 199 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 PQLC3Q8N755 202 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 FETUBQ9UGM5 382 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 CHMP2BQ9UQN3 213 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 TET1Q8NFU7 2136 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.54□□□□□ -0.4
HMGCL-202ENST00000374487 PITPNM1O00562 1244 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 MAP3K6O95382 1288 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 CA4P22748 312 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 CYP2F1P24903 491 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 RBL1P28749 1068 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 LILRA4P59901 499 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 SOX4Q06945 474 aaPredicted RBP12.54□□□□□ -0.4
HMGCL-202ENST00000374487 LACTB2Q53H82 288 aaPredicted RBP12.54□□□□□ -0.4
HMGCL-202ENST00000374487 XKR4Q5GH76 650 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 HSFY1Q96LI6 401 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 ACSS3Q9H6R3 686 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 KIF9Q9HAQ2 790 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 USP29Q9HBJ7 922 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 CYLDQ9NQC7 956 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.54□□□□□ -0.4
HMGCL-202ENST00000374487 IKBKGQ9Y6K9 419 aa12.54□□□□□ -0.4
HMGCL-202ENST00000374487 BCLAF3A2AJT9 711 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms