RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 PIGVQ9NUD9 493 aa18.3■□□□□ 0.52
C9orf43-202ENST00000374165 PCSK1NQ9UHG2 260 aa18.3■□□□□ 0.52
C9orf43-202ENST00000374165 MSI1O43347 362 aaKnown RBP18.29■□□□□ 0.52
C9orf43-202ENST00000374165 TRUB2O95900 331 aaKnown RBP18.29■□□□□ 0.52
C9orf43-202ENST00000374165 RHOXF2BP0C7M4 288 aa18.29■□□□□ 0.52
C9orf43-202ENST00000374165 GABRR2P28476 465 aa18.29■□□□□ 0.52
C9orf43-202ENST00000374165 MIPP30301 263 aa18.29■□□□□ 0.52
C9orf43-202ENST00000374165 CCDC181Q5TID7 509 aa18.29■□□□□ 0.52
C9orf43-202ENST00000374165 SNX30Q5VWJ9 437 aa18.29■□□□□ 0.52
C9orf43-202ENST00000374165 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.29■□□□□ 0.52
C9orf43-202ENST00000374165 ALG3Q92685 438 aa18.29■□□□□ 0.52
C9orf43-202ENST00000374165 ACSF2Q96CM8 615 aaPredicted RBP18.29■□□□□ 0.52
C9orf43-202ENST00000374165 HES6Q96HZ4 224 aa18.29■□□□□ 0.52
C9orf43-202ENST00000374165 CALR3Q96L12 384 aaKnown RBP18.29■□□□□ 0.52
C9orf43-202ENST00000374165 SLC22A12Q96S37 553 aa18.29■□□□□ 0.52
C9orf43-202ENST00000374165 RHOXF2Q9BQY4 288 aa18.29■□□□□ 0.52
C9orf43-202ENST00000374165 RNF38Q9H0F5 515 aa18.29■□□□□ 0.52
C9orf43-202ENST00000374165 ANLNQ9NQW6 1124 aa18.29■□□□□ 0.52
C9orf43-202ENST00000374165 TMPRSS4Q9NRS4 437 aa18.29■□□□□ 0.52
C9orf43-202ENST00000374165 CLIC5Q9NZA1 410 aa18.29■□□□□ 0.52
C9orf43-202ENST00000374165 A0A1W2PRU2 124 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 I6L893 689 aaPredicted RBP18.28■□□□□ 0.52
C9orf43-202ENST00000374165 KCNK3O14649 394 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 TLR5O60602 858 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 HOXA9P31269 272 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 MAN1A1P33908 653 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 SSR1P43307 286 aaKnown RBP18.28■□□□□ 0.52
C9orf43-202ENST00000374165 EIF4EBP2Q13542 120 aaPredicted RBP18.28■□□□□ 0.52
C9orf43-202ENST00000374165 SLC5A9Q2M3M2 681 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 KCNT1Q5JUK3 1230 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 STXBP5Q5T5C0 1151 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 BEND5Q7L4P6 421 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 HDAC7Q8WUI4 952 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 TCEAL4Q96EI5 215 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 CYP2S1Q96SQ9 504 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 PRKD2Q9BZL6 878 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 ZDHHC7Q9NXF8 308 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 AMFRQ9UKV5 643 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 TMEM265A0A087WTH1 108 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 SPDYE4A6NLX3 237 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 RNF8O76064 485 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 ENDOD1O94919 500 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 IGLV3-25P01717 112 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 MYL4P12829 197 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 IGFBP4P22692 258 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 SLC1A1P43005 524 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 CYP4F8P98187 520 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 SLC25A11Q02978 314 aaKnown RBP18.28■□□□□ 0.52
C9orf43-202ENST00000374165 DLX2Q07687 328 aaPredicted RBP18.28■□□□□ 0.52
C9orf43-202ENST00000374165 C2orf54Q08AI8 447 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 SMTNL2Q2TAL5 461 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 TXNDC8Q6A555 127 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 SCYL2Q6P3W7 929 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 Q7L0L9 218 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 RTL10Q7L3V2 364 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 GRASPQ7Z6J2 395 aaPredicted RBP18.28■□□□□ 0.52
C9orf43-202ENST00000374165 FAM131BQ86XD5 332 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 ARHGAP18Q8N392 663 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 SPATA4Q8NEY3 305 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 CDCA3Q99618 268 aaPredicted RBP18.28■□□□□ 0.52
C9orf43-202ENST00000374165 WDR6Q9NNW5 1121 aaKnown RBP18.28■□□□□ 0.52
C9orf43-202ENST00000374165 DDIT4Q9NX09 232 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 TRPM5Q9NZQ8 1165 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 STAP1Q9ULZ2 295 aa18.28■□□□□ 0.52
C9orf43-202ENST00000374165 DDX3YO15523 660 aaKnown RBP18.27■□□□□ 0.52
C9orf43-202ENST00000374165 COCHO43405 550 aa18.27■□□□□ 0.52
C9orf43-202ENST00000374165 HNRNPA1P09651 372 aaKnown RBP eCLIP18.27■□□□□ 0.52
C9orf43-202ENST00000374165 GJC1P36383 396 aa18.27■□□□□ 0.52
C9orf43-202ENST00000374165 PAFAH1B1P43034 410 aa18.27■□□□□ 0.52
C9orf43-202ENST00000374165 PSEN1P49768 467 aa18.27■□□□□ 0.52
C9orf43-202ENST00000374165 PEX5P50542 639 aa18.27■□□□□ 0.52
C9orf43-202ENST00000374165 ITIH3Q06033 890 aa18.27■□□□□ 0.52
C9orf43-202ENST00000374165 EFEMP1Q12805 493 aa18.27■□□□□ 0.52
C9orf43-202ENST00000374165 C10orf120Q5SQS8 335 aa18.27■□□□□ 0.52
C9orf43-202ENST00000374165 DCAF12L1Q5VU92 463 aa18.27■□□□□ 0.52
C9orf43-202ENST00000374165 POTEHQ6S545 545 aa18.27■□□□□ 0.52
C9orf43-202ENST00000374165 MIB1Q86YT6 1006 aa18.27■□□□□ 0.52
C9orf43-202ENST00000374165 ELMOD1Q8N336 334 aa18.27■□□□□ 0.52
C9orf43-202ENST00000374165 RNF139Q8WU17 664 aa18.27■□□□□ 0.52
C9orf43-202ENST00000374165 OVCA2Q8WZ82 227 aa18.27■□□□□ 0.52
C9orf43-202ENST00000374165 SMOC2Q9H3U7 446 aa18.27■□□□□ 0.52
C9orf43-202ENST00000374165 KLHL11Q9NVR0 708 aa18.27■□□□□ 0.52
C9orf43-202ENST00000374165 UXTQ9UBK9 157 aaPredicted RBP18.27■□□□□ 0.52
C9orf43-202ENST00000374165 RNF14Q9UBS8 474 aa18.27■□□□□ 0.52
C9orf43-202ENST00000374165 USP18Q9UMW8 372 aa18.27■□□□□ 0.52
C9orf43-202ENST00000374165 MOSPD3O75425 235 aa18.27■□□□□ 0.51
C9orf43-202ENST00000374165 RHOP08100 348 aa18.27■□□□□ 0.51
C9orf43-202ENST00000374165 PTPN2P17706 415 aa18.27■□□□□ 0.51
C9orf43-202ENST00000374165 CLCN6P51797 869 aa18.27■□□□□ 0.51
C9orf43-202ENST00000374165 ACAP1Q15027 740 aa18.27■□□□□ 0.51
C9orf43-202ENST00000374165 SYCE2Q6PIF2 218 aa18.27■□□□□ 0.51
C9orf43-202ENST00000374165 STRADAQ7RTN6 431 aa18.27■□□□□ 0.51
C9orf43-202ENST00000374165 CCDC185Q8N715 623 aa18.27■□□□□ 0.51
C9orf43-202ENST00000374165 EFHBQ8N7U6 833 aa18.27■□□□□ 0.51
C9orf43-202ENST00000374165 PDZD8Q8NEN9 1154 aa18.27■□□□□ 0.51
C9orf43-202ENST00000374165 PPP2R3CQ969Q6 453 aa18.27■□□□□ 0.51
C9orf43-202ENST00000374165 PNKPQ96T60 521 aa18.27■□□□□ 0.51
C9orf43-202ENST00000374165 FAM204AQ9H8W3 233 aa18.27■□□□□ 0.51
C9orf43-202ENST00000374165 ZWILCHQ9H900 591 aa18.27■□□□□ 0.51
C9orf43-202ENST00000374165 ASAH2Q9NR71 780 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms