RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 ADAT2Q7Z6V5 191 aaKnown RBP13.02□□□□□ -0.33
HDAC8-204ENST00000373560 SKAP1Q86WV1 359 aa13.02□□□□□ -0.33
HDAC8-204ENST00000373560 CACTIN-AS1Q8N1I8 211 aa13.02□□□□□ -0.33
HDAC8-204ENST00000373560 EXTL1Q92935 676 aa13.02□□□□□ -0.33
HDAC8-204ENST00000373560 OTUB2Q96DC9 234 aa13.02□□□□□ -0.33
HDAC8-204ENST00000373560 BBS2Q9BXC9 721 aa13.02□□□□□ -0.33
HDAC8-204ENST00000373560 DPH1Q9BZG8 443 aa13.02□□□□□ -0.33
HDAC8-204ENST00000373560 CCSER2Q9H7U1 834 aa13.02□□□□□ -0.33
HDAC8-204ENST00000373560 EBF2Q9HAK2 575 aa13.02□□□□□ -0.33
HDAC8-204ENST00000373560 CRTAC1Q9NQ79 661 aa13.02□□□□□ -0.33
HDAC8-204ENST00000373560 PLK2Q9NYY3 685 aa13.02□□□□□ -0.33
HDAC8-204ENST00000373560 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.02□□□□□ -0.33
HDAC8-204ENST00000373560 TSPAN3O60637 253 aa13.01□□□□□ -0.33
HDAC8-204ENST00000373560 USP12O75317 370 aa13.01□□□□□ -0.33
HDAC8-204ENST00000373560 CTDNEP1O95476 244 aa13.01□□□□□ -0.33
HDAC8-204ENST00000373560 IGHV4-34P06331 123 aa13.01□□□□□ -0.33
HDAC8-204ENST00000373560 CDC25AP30304 524 aa13.01□□□□□ -0.33
HDAC8-204ENST00000373560 PGFP49763 221 aa13.01□□□□□ -0.33
HDAC8-204ENST00000373560 COPS2P61201 443 aa13.01□□□□□ -0.33
HDAC8-204ENST00000373560 ST3GAL1Q11201 340 aa13.01□□□□□ -0.33
HDAC8-204ENST00000373560 ORC1Q13415 861 aa13.01□□□□□ -0.33
HDAC8-204ENST00000373560 ENPP2Q13822 863 aa13.01□□□□□ -0.33
HDAC8-204ENST00000373560 STARD3Q14849 445 aa13.01□□□□□ -0.33
HDAC8-204ENST00000373560 GEN1Q17RS7 908 aa13.01□□□□□ -0.33
HDAC8-204ENST00000373560 SFMBT2Q5VUG0 894 aa13.01□□□□□ -0.33
HDAC8-204ENST00000373560 FAM171BQ6P995 826 aa13.01□□□□□ -0.33
HDAC8-204ENST00000373560 CCDC81Q6ZN84 652 aa13.01□□□□□ -0.33
HDAC8-204ENST00000373560 DDX42Q86XP3 938 aaKnown RBP eCLIP13.01□□□□□ -0.33
HDAC8-204ENST00000373560 SORCS1Q8WY21 1168 aa13.01□□□□□ -0.33
HDAC8-204ENST00000373560 FUBP3Q96I24 572 aaKnown RBP eCLIP13.01□□□□□ -0.33
HDAC8-204ENST00000373560 NTPCRQ9BSD7 190 aaKnown RBP13.01□□□□□ -0.33
HDAC8-204ENST00000373560 IKZF4Q9H2S9 585 aa13.01□□□□□ -0.33
HDAC8-204ENST00000373560 ADAMTS1Q9UHI8 967 aa13.01□□□□□ -0.33
HDAC8-204ENST00000373560 SH3BP1Q9Y3L3 701 aa13.01□□□□□ -0.33
HDAC8-204ENST00000373560 PCDHB3Q9Y5E6 796 aa13.01□□□□□ -0.33
HDAC8-204ENST00000373560 PTPRJQ12913 1337 aa13.01□□□□□ -0.33
HDAC8-204ENST00000373560 CSMD1Q96PZ7 3565 aa13□□□□□ -0.33
HDAC8-204ENST00000373560 LRBAP50851 2863 aa13□□□□□ -0.33
HDAC8-204ENST00000373560 KIF26BQ2KJY2 2108 aa13□□□□□ -0.33
HDAC8-204ENST00000373560 ZFC3H1O60293 1989 aaKnown RBP13□□□□□ -0.33
HDAC8-204ENST00000373560 A0A0B4J269 797 aa13□□□□□ -0.33
HDAC8-204ENST00000373560 PP2D1A8MPX8 630 aa13□□□□□ -0.33
HDAC8-204ENST00000373560 F8VP50 259 aa13□□□□□ -0.33
HDAC8-204ENST00000373560 VILLO15195 856 aa13□□□□□ -0.33
HDAC8-204ENST00000373560 CKMT2P17540 419 aa13□□□□□ -0.33
HDAC8-204ENST00000373560 CD27P26842 260 aa13□□□□□ -0.33
HDAC8-204ENST00000373560 POLR2BP30876 1174 aaKnown RBP13□□□□□ -0.33
HDAC8-204ENST00000373560 DGKGP49619 791 aa13□□□□□ -0.33
HDAC8-204ENST00000373560 LIG4P49917 911 aa13□□□□□ -0.33
HDAC8-204ENST00000373560 ERVPABLB-1P60509 514 aa13□□□□□ -0.33
HDAC8-204ENST00000373560 CLN3Q13286 438 aa13□□□□□ -0.33
HDAC8-204ENST00000373560 AAMPQ13685 434 aa13□□□□□ -0.33
HDAC8-204ENST00000373560 ZSCAN23Q3MJ62 389 aa13□□□□□ -0.33
HDAC8-204ENST00000373560 CDCP2Q5VXM1 449 aa13□□□□□ -0.33
HDAC8-204ENST00000373560 ERMNQ8TAM6 284 aa13□□□□□ -0.33
HDAC8-204ENST00000373560 MSTO1Q9BUK6 570 aa13□□□□□ -0.33
HDAC8-204ENST00000373560 REPIN1Q9BWE0 567 aaKnown RBP13□□□□□ -0.33
HDAC8-204ENST00000373560 PCED1AQ9H1Q7 454 aa13□□□□□ -0.33
HDAC8-204ENST00000373560 EPN3Q9H201 632 aa13□□□□□ -0.33
HDAC8-204ENST00000373560 THAP10Q9P2Z0 257 aaPredicted RBP13□□□□□ -0.33
HDAC8-204ENST00000373560 DERAQ9Y315 318 aa13□□□□□ -0.33
HDAC8-204ENST00000373560 NME7Q9Y5B8 376 aa13□□□□□ -0.33
HDAC8-204ENST00000373560 CACNA1DQ01668 2161 aa13□□□□□ -0.33
HDAC8-204ENST00000373560 NPHP3-ACAD11A0A0J9YXS1 232 aa12.99□□□□□ -0.33
HDAC8-204ENST00000373560 HNRNPDLO14979 420 aaKnown RBP12.99□□□□□ -0.33
HDAC8-204ENST00000373560 SEMA4FO95754 770 aa12.99□□□□□ -0.33
HDAC8-204ENST00000373560 ACADMP11310 421 aa12.99□□□□□ -0.33
HDAC8-204ENST00000373560 PLS3P13797 630 aa12.99□□□□□ -0.33
HDAC8-204ENST00000373560 ACP1P24666 158 aa12.99□□□□□ -0.33
HDAC8-204ENST00000373560 LMO2P25791 158 aa12.99□□□□□ -0.33
HDAC8-204ENST00000373560 LSSP48449 732 aa12.99□□□□□ -0.33
HDAC8-204ENST00000373560 RIPPLY3P57055 190 aa12.99□□□□□ -0.33
HDAC8-204ENST00000373560 C21orf59P57076 290 aa12.99□□□□□ -0.33
HDAC8-204ENST00000373560 MYL7Q01449 175 aa12.99□□□□□ -0.33
HDAC8-204ENST00000373560 ILKQ13418 452 aa12.99□□□□□ -0.33
HDAC8-204ENST00000373560 ZNF234Q14588 700 aa12.99□□□□□ -0.33
HDAC8-204ENST00000373560 ARL13BQ3SXY8 428 aa12.99□□□□□ -0.33
HDAC8-204ENST00000373560 ZNF366Q8N895 744 aa12.99□□□□□ -0.33
HDAC8-204ENST00000373560 RBBP8NLQ8NC74 664 aaPredicted RBP12.99□□□□□ -0.33
HDAC8-204ENST00000373560 CXorf38Q8TB03 319 aa12.99□□□□□ -0.33
HDAC8-204ENST00000373560 TSPAN18Q96SJ8 248 aa12.99□□□□□ -0.33
HDAC8-204ENST00000373560 SYT15Q9BQS2 421 aa12.99□□□□□ -0.33
HDAC8-204ENST00000373560 ACE2Q9BYF1 805 aaPredicted RBP12.99□□□□□ -0.33
HDAC8-204ENST00000373560 POLR1BQ9H9Y6 1135 aa12.99□□□□□ -0.33
HDAC8-204ENST00000373560 C2CD2Q9Y426 696 aa12.99□□□□□ -0.33
HDAC8-204ENST00000373560 NBASA2RRP1 2371 aa12.99□□□□□ -0.33
HDAC8-204ENST00000373560 SPTBN1Q01082 2364 aaKnown RBP12.99□□□□□ -0.33
HDAC8-204ENST00000373560 ANKRD63C9JTQ0 380 aa12.98□□□□□ -0.33
HDAC8-204ENST00000373560 TRIM38O00635 465 aa12.98□□□□□ -0.33
HDAC8-204ENST00000373560 GABRDO14764 452 aa12.98□□□□□ -0.33
HDAC8-204ENST00000373560 ACTN4O43707 911 aaKnown RBP12.98□□□□□ -0.33
HDAC8-204ENST00000373560 CSO75390 466 aaKnown RBP12.98□□□□□ -0.33
HDAC8-204ENST00000373560 OR52Z1P0C646 297 aa12.98□□□□□ -0.33
HDAC8-204ENST00000373560 FDPSP14324 419 aaKnown RBP12.98□□□□□ -0.33
HDAC8-204ENST00000373560 ACO1P21399 889 aaKnown RBP12.98□□□□□ -0.33
HDAC8-204ENST00000373560 MUTP22033 750 aa12.98□□□□□ -0.33
HDAC8-204ENST00000373560 NCKAP1LP55160 1127 aa12.98□□□□□ -0.33
HDAC8-204ENST00000373560 NOP14P78316 857 aaKnown RBP12.98□□□□□ -0.33
HDAC8-204ENST00000373560 SOWAHAQ2M3V2 549 aa12.98□□□□□ -0.33
HDAC8-204ENST00000373560 C3orf38Q5JPI3 329 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms