RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 COLGALT1Q8NBJ5 622 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 IPMKQ8NFU5 416 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 PCDH19Q8TAB3 1148 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 PABPC5Q96DU9 382 aaKnown RBP13.66□□□□□ -0.22
NCDN-203ENST00000373253 FLRT1Q9NZU1 646 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 PAK5Q9P286 719 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 RPS6KL1Q9Y6S9 549 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 PTPN1P18031 435 aaKnown RBP13.66□□□□□ -0.22
NCDN-203ENST00000373253 NCF2P19878 526 aaPredicted RBP13.66□□□□□ -0.22
NCDN-203ENST00000373253 IVDP26440 423 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 MGAT1P26572 445 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 PBX3P40426 434 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 GLRBP48167 497 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 PGGT1BP53609 377 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 KCNJ2P63252 427 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 TRIM32Q13049 653 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 SPATS2Q86XZ4 545 aaKnown RBP13.66□□□□□ -0.22
NCDN-203ENST00000373253 ZFYVE28Q9HCC9 887 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 DNAJC25-GNG10A0A024R161 153 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 BEST1O76090 585 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 AVPR1AP37288 418 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 RGS2P41220 211 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 GRM5P41594 1212 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 LILRA4P59901 499 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 KLF1Q13351 362 aaPredicted RBP13.66□□□□□ -0.22
NCDN-203ENST00000373253 MFSD14CQ5VZR4 134 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 TRMT10BQ6PF06 316 aaKnown RBP13.66□□□□□ -0.22
NCDN-203ENST00000373253 IGDCC3Q8IVU1 814 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 CNPY4Q8N129 248 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 CDKL2Q92772 493 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 TLCD1Q96CP7 247 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 B3GALT6Q96L58 329 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 SGIP1Q9BQI5 828 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 ZFP69BQ9UJL9 534 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 ARL2BPQ9Y2Y0 163 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 C2CD2Q9Y426 696 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 TCRBV9S1A1TA0A576 114 aa13.65□□□□□ -0.22
NCDN-203ENST00000373253 C2CD4BA6NLJ0 364 aa13.65□□□□□ -0.22
NCDN-203ENST00000373253 TRPA1O75762 1119 aa13.65□□□□□ -0.22
NCDN-203ENST00000373253 STIP1P31948 543 aaKnown RBP13.65□□□□□ -0.22
NCDN-203ENST00000373253 ALDH18A1P54886 795 aaKnown RBP13.65□□□□□ -0.22
NCDN-203ENST00000373253 FAM110CQ1W6H9 321 aa13.65□□□□□ -0.22
NCDN-203ENST00000373253 BTBD8Q5XKL5 378 aa13.65□□□□□ -0.22
NCDN-203ENST00000373253 LCLAT1Q6UWP7 414 aa13.65□□□□□ -0.22
NCDN-203ENST00000373253 VSTM1Q6UX27 236 aa13.65□□□□□ -0.22
NCDN-203ENST00000373253 CDKL3Q8IVW4 592 aaPredicted RBP13.65□□□□□ -0.22
NCDN-203ENST00000373253 TFB1MQ8WVM0 346 aaKnown RBP13.65□□□□□ -0.22
NCDN-203ENST00000373253 N4BP2L2Q92802 583 aaPredicted RBP13.65□□□□□ -0.22
NCDN-203ENST00000373253 PRDM12Q9H4Q4 367 aa13.65□□□□□ -0.22
NCDN-203ENST00000373253 WDCPQ9H6R7 721 aa13.65□□□□□ -0.22
NCDN-203ENST00000373253 NRDE2Q9H7Z3 1164 aa13.65□□□□□ -0.22
NCDN-203ENST00000373253 ZBTB48P10074 688 aaPredicted RBP13.65□□□□□ -0.22
NCDN-203ENST00000373253 ERVK-10P10266 1014 aa13.65□□□□□ -0.22
NCDN-203ENST00000373253 HOXA11P31270 313 aaPredicted RBP13.65□□□□□ -0.22
NCDN-203ENST00000373253 ATXN3P54252 364 aaPredicted RBP13.65□□□□□ -0.22
NCDN-203ENST00000373253 PRPF39Q86UA1 669 aaKnown RBP13.65□□□□□ -0.22
NCDN-203ENST00000373253 MTDHQ86UE4 582 aaKnown RBP13.65□□□□□ -0.22
NCDN-203ENST00000373253 PDCD6IPQ8WUM4 868 aaKnown RBP13.65□□□□□ -0.22
NCDN-203ENST00000373253 TSSK1BQ9BXA7 367 aa13.65□□□□□ -0.22
NCDN-203ENST00000373253 ZNF395Q9H8N7 513 aaPredicted RBP13.65□□□□□ -0.22
NCDN-203ENST00000373253 PTPRHQ9HD43 1115 aa13.65□□□□□ -0.22
NCDN-203ENST00000373253 QSER1Q2KHR3 1735 aa13.65□□□□□ -0.22
NCDN-203ENST00000373253 SSC5DA1L4H1 1573 aa13.65□□□□□ -0.22
NCDN-203ENST00000373253 H3BRJ5 948 aa13.65□□□□□ -0.23
NCDN-203ENST00000373253 MSI1O43347 362 aaKnown RBP13.65□□□□□ -0.23
NCDN-203ENST00000373253 BAG2O95816 211 aa13.65□□□□□ -0.23
NCDN-203ENST00000373253 CPB1P15086 417 aa13.65□□□□□ -0.23
NCDN-203ENST00000373253 PSMB4P28070 264 aa13.65□□□□□ -0.23
NCDN-203ENST00000373253 CDC25CP30307 473 aa13.65□□□□□ -0.23
NCDN-203ENST00000373253 SLC25A11Q02978 314 aaKnown RBP13.65□□□□□ -0.23
NCDN-203ENST00000373253 RNASEH2BQ5TBB1 312 aaKnown RBP13.65□□□□□ -0.23
NCDN-203ENST00000373253 EIF1ADQ8N9N8 165 aaKnown RBP13.65□□□□□ -0.23
NCDN-203ENST00000373253 DTX3LQ8TDB6 740 aa13.65□□□□□ -0.23
NCDN-203ENST00000373253 ATP2A3Q93084 1043 aa13.65□□□□□ -0.23
NCDN-203ENST00000373253 RMDN2Q96LZ7 410 aa13.65□□□□□ -0.23
NCDN-203ENST00000373253 TRIM55Q9BYV6 548 aa13.65□□□□□ -0.23
NCDN-203ENST00000373253 CYP4F11Q9HBI6 524 aa13.65□□□□□ -0.23
NCDN-203ENST00000373253 SFMBT1Q9UHJ3 866 aa13.65□□□□□ -0.23
NCDN-203ENST00000373253 SHOC2Q9UQ13 582 aa13.65□□□□□ -0.23
NCDN-203ENST00000373253 IGKV6-21A0A0C4DH24 114 aa13.64□□□□□ -0.23
NCDN-203ENST00000373253 LOC100653049A0A140TA62 436 aa13.64□□□□□ -0.23
NCDN-203ENST00000373253 RNF103O00237 685 aa13.64□□□□□ -0.23
NCDN-203ENST00000373253 KRT34O76011 436 aa13.64□□□□□ -0.23
NCDN-203ENST00000373253 KCNA4P22459 653 aa13.64□□□□□ -0.23
NCDN-203ENST00000373253 FOXN2P32314 431 aa13.64□□□□□ -0.23
NCDN-203ENST00000373253 POU5F1BQ06416 359 aa13.64□□□□□ -0.23
NCDN-203ENST00000373253 CHI3L2Q15782 390 aa13.64□□□□□ -0.23
NCDN-203ENST00000373253 ARL13BQ3SXY8 428 aa13.64□□□□□ -0.23
NCDN-203ENST00000373253 ZNF410Q86VK4 478 aa13.64□□□□□ -0.23
NCDN-203ENST00000373253 MPP5Q8N3R9 675 aa13.64□□□□□ -0.23
NCDN-203ENST00000373253 PPP4R1Q8TF05 950 aa13.64□□□□□ -0.23
NCDN-203ENST00000373253 SPON2Q9BUD6 331 aa13.64□□□□□ -0.23
NCDN-203ENST00000373253 ADAM7Q9H2U9 754 aa13.64□□□□□ -0.23
NCDN-203ENST00000373253 PCDHGC3Q9UN70 934 aa13.64□□□□□ -0.23
NCDN-203ENST00000373253 LTBP1Q14766 1721 aa13.64□□□□□ -0.23
NCDN-203ENST00000373253 NEMP1O14524 444 aa13.64□□□□□ -0.23
NCDN-203ENST00000373253 SNX3O60493 162 aa13.64□□□□□ -0.23
NCDN-203ENST00000373253 KRT38O76015 456 aa13.64□□□□□ -0.23
NCDN-203ENST00000373253 ENDOD1O94919 500 aa13.64□□□□□ -0.23
NCDN-203ENST00000373253 METTL18O95568 372 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms