RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 PDCL3Q9H2J4 239 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 FBRSL1Q9HCM7 1045 aaKnown RBP10.48□□□□□ -0.73
TPM3-210ENST00000368530 OSGEPQ9NPF4 335 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 GKN1Q9NS71 199 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 CHORDC1Q9UHD1 332 aaPredicted RBP10.48□□□□□ -0.73
TPM3-210ENST00000368530 SNX12Q9UMY4 172 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 CCL26Q9Y258 94 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 DERAQ9Y315 318 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 ATP8B3O60423 1300 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 USP24Q9UPU5 2620 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 SCN1AP35498 2009 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 CCDC163A0A0D9SF12 145 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 ANKRD62A6NC57 917 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 DPYSL4O14531 572 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 TRDMT1O14717 391 aaKnown RBP10.48□□□□□ -0.73
TPM3-210ENST00000368530 THAP12O43422 761 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 HAPLN1P10915 354 aaPredicted RBP10.48□□□□□ -0.73
TPM3-210ENST00000368530 GNA15P30679 374 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 POLR2BP30876 1174 aaKnown RBP10.48□□□□□ -0.73
TPM3-210ENST00000368530 BPIFB4P59827 614 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 SF3A2Q15428 464 aaKnown RBP10.48□□□□□ -0.73
TPM3-210ENST00000368530 ITPRIPL2Q3MIP1 535 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 ZNF394Q53GI3 561 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 PHLDB2Q86SQ0 1253 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 PASD1Q8IV76 773 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 CMTM8Q8IZV2 173 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 TPCN2Q8NHX9 752 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 SLC35G2Q8TBE7 412 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 GIPC2Q8TF65 315 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 COG1Q8WTW3 980 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 RFFLQ8WZ73 363 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 GOLGA1Q92805 767 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 USP13Q92995 863 aaPredicted RBP10.48□□□□□ -0.73
TPM3-210ENST00000368530 TLR10Q9BXR5 811 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 XYLT2Q9H1B5 865 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 ISCUQ9H1K1 167 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 ASB7Q9H672 318 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 TMLHEQ9NVH6 421 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 POLR3BQ9NW08 1133 aaPredicted RBP10.48□□□□□ -0.73
TPM3-210ENST00000368530 AGAP1Q9UPQ3 857 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 HYOU1Q9Y4L1 999 aa10.48□□□□□ -0.73
TPM3-210ENST00000368530 MAP1BP46821 2468 aaKnown RBP10.47□□□□□ -0.73
TPM3-210ENST00000368530 A0A0A6YYK5 440 aaPredicted RBP10.47□□□□□ -0.73
TPM3-210ENST00000368530 CTAGE15A4D2H0 777 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 TMEM110-MUSTN1A8MSY1 372 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 EFCAB8A8MWE9 144 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 CYB561D2O14569 222 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 ZNF806P0C7X5 589 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 CTAGE8P0CG41 777 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 CDC25CP30307 473 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 ASPAP45381 313 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 PXNP49023 591 aaPredicted RBP10.47□□□□□ -0.73
TPM3-210ENST00000368530 LIMK1P53667 647 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 RUNX3Q13761 415 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 CLEC16AQ2KHT3 1053 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 MGAT5BQ3V5L5 792 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 ARHGAP15Q53QZ3 475 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 ZNF667Q5HYK9 610 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 PLA2G2CQ5R387 149 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 MEI1Q5TIA1 1274 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 NAA35Q5VZE5 725 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 WSCD1Q658N2 575 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 TRIM68Q6AZZ1 485 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 CTAGE6Q86UF2 777 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 CTAGE4Q8IX94 777 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 UBR7Q8N806 425 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 GAB3Q8WWW8 586 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 CPA5Q8WXQ8 436 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 EZH1Q92800 747 aaPredicted RBP10.47□□□□□ -0.73
TPM3-210ENST00000368530 ZNF653Q96CK0 615 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 OSBPL9Q96SU4 736 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 MMS19Q96T76 1030 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 SEPT5Q99719 369 aaPredicted RBP10.47□□□□□ -0.73
TPM3-210ENST00000368530 ARRDC1-AS1Q9H2J1 176 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 CISHQ9NSE2 258 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 DPP3Q9NY33 737 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 SMARCAL1Q9NZC9 954 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 EHD2Q9NZN4 543 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 CTTNBP2NLQ9P2B4 639 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 C2CD2Q9Y426 696 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 TSC2P49815 1807 aa10.47□□□□□ -0.73
TPM3-210ENST00000368530 NUP210Q8TEM1 1887 aaPredicted RBP10.46□□□□□ -0.73
TPM3-210ENST00000368530 KIF26AQ9ULI4 1882 aaPredicted RBP10.46□□□□□ -0.73
TPM3-210ENST00000368530 PDE2AO00408 941 aaPredicted RBP10.46□□□□□ -0.74
TPM3-210ENST00000368530 AXIN1O15169 862 aa10.46□□□□□ -0.74
TPM3-210ENST00000368530 FOXD2O60548 495 aaPredicted RBP10.46□□□□□ -0.74
TPM3-210ENST00000368530 BRD2P25440 801 aaKnown RBP10.46□□□□□ -0.74
TPM3-210ENST00000368530 CDH8P55286 799 aa10.46□□□□□ -0.74
TPM3-210ENST00000368530 POU5F1Q01860 360 aaKnown RBP10.46□□□□□ -0.74
TPM3-210ENST00000368530 CKAP4Q07065 602 aaKnown RBP10.46□□□□□ -0.74
TPM3-210ENST00000368530 SMARCB1Q12824 385 aa10.46□□□□□ -0.74
TPM3-210ENST00000368530 ORC1Q13415 861 aa10.46□□□□□ -0.74
TPM3-210ENST00000368530 DSG2Q14126 1118 aa10.46□□□□□ -0.74
TPM3-210ENST00000368530 CCDC6Q16204 474 aa10.46□□□□□ -0.74
TPM3-210ENST00000368530 WDR72Q3MJ13 1102 aa10.46□□□□□ -0.74
TPM3-210ENST00000368530 NAIF1Q69YI7 327 aaPredicted RBP10.46□□□□□ -0.74
TPM3-210ENST00000368530 ACAD10Q6JQN1 1059 aa10.46□□□□□ -0.74
TPM3-210ENST00000368530 RSRC2Q7L4I2 434 aaKnown RBP10.46□□□□□ -0.74
TPM3-210ENST00000368530 PEX26Q7Z412 305 aa10.46□□□□□ -0.74
TPM3-210ENST00000368530 DAAM2Q86T65 1068 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms