RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 BOP1Q14137 746 aaKnown RBP7.27□□□□□ -1.25
SPTA1-201ENST00000368147 AASDHQ4L235 1098 aaPredicted RBP7.27□□□□□ -1.25
SPTA1-201ENST00000368147 USP39Q53GS9 565 aaKnown RBP7.27□□□□□ -1.25
SPTA1-201ENST00000368147 LGI2Q8N0V4 545 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 COPS5Q92905 334 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 RELTQ969Z4 430 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 ABCB6Q9NP58 842 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 LNPEPQ9UIQ6 1025 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 MGAT4AQ9UM21 535 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 ZNF609O15014 1411 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 A0A087X0T9 212 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 SGPL1O95470 568 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 PNPLA4P41247 253 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 CCR4P51679 360 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 RPL10AP62906 217 aaKnown RBP7.27□□□□□ -1.25
SPTA1-201ENST00000368147 ATP2C1P98194 919 aaPredicted RBP7.27□□□□□ -1.25
SPTA1-201ENST00000368147 UBE2Q1Q7Z7E8 422 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 FIBCD1Q8N539 461 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 LPCAT1Q8NF37 534 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 TRPM4Q8TD43 1214 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 TSPAN17Q96FV3 270 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 PARD6BQ9BYG5 372 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 BCL2L14Q9BZR8 327 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 ATP6V1HQ9UI12 483 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 DIS3Q9Y2L1 958 aaKnown RBP7.27□□□□□ -1.25
SPTA1-201ENST00000368147 CHURC1-FNTBB4DL54 471 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 GNB5O14775 395 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 ZW10O43264 779 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 TKTL1P51854 596 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 PREPLQ4J6C6 727 aaPredicted RBP7.27□□□□□ -1.25
SPTA1-201ENST00000368147 SARM1Q6SZW1 724 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 MPZL3Q6UWV2 235 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 CAMK1DQ8IU85 385 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 WNK4Q96J92 1243 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 KLHL25Q9H0H3 589 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.27□□□□□ -1.25
SPTA1-201ENST00000368147 KRT33AO76009 404 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 LTFP02788 710 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 WARSP23381 471 aaKnown RBP7.27□□□□□ -1.25
SPTA1-201ENST00000368147 JAK1P23458 1154 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 PLA2G4AP47712 749 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 YWHAZP63104 245 aaKnown RBP7.27□□□□□ -1.25
SPTA1-201ENST00000368147 COX10Q12887 443 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 PTPAQ15257 358 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 SETMARQ53H47 684 aaPredicted RBP7.27□□□□□ -1.25
SPTA1-201ENST00000368147 SHC4Q6S5L8 630 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 CCDC60Q8IWA6 550 aaPredicted RBP7.27□□□□□ -1.25
SPTA1-201ENST00000368147 CLEC4FQ8N1N0 589 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 CLHC1Q8NHS4 586 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 RMND5BQ96G75 393 aaPredicted RBP7.27□□□□□ -1.25
SPTA1-201ENST00000368147 KLF6Q99612 283 aaPredicted RBP7.27□□□□□ -1.25
SPTA1-201ENST00000368147 ZNF304Q9HCX3 659 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 SLC9A8Q9Y2E8 581 aa7.27□□□□□ -1.25
SPTA1-201ENST00000368147 PHLPP1O60346 1717 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 VWA5AO00534 786 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 RPN2P04844 631 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 GRSF1Q12849 480 aaKnown RBP eCLIP7.26□□□□□ -1.25
SPTA1-201ENST00000368147 ITGB3BPQ13352 177 aaPredicted RBP7.26□□□□□ -1.25
SPTA1-201ENST00000368147 SDHAF4Q5VUM1 108 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 PMF1Q6P1K2 205 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 CYP20A1Q6UW02 462 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 SLFN11Q7Z7L1 901 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 PARGQ86W56 976 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 ZSWIM2Q8NEG5 633 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 FICDQ9BVA6 458 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 GOLPH3Q9H4A6 298 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 TMEM8AQ9HCN3 771 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 EPB41L4AQ9HCS5 686 aaPredicted RBP7.26□□□□□ -1.25
SPTA1-201ENST00000368147 KLHL3Q9UH77 587 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 UBQLN1Q9UMX0 589 aaKnown RBP7.26□□□□□ -1.25
SPTA1-201ENST00000368147 MRPS23Q9Y3D9 190 aaKnown RBP7.26□□□□□ -1.25
SPTA1-201ENST00000368147 CDY2AQ9Y6F7 541 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 SF3B1O75533 1304 aaKnown RBP eCLIP7.26□□□□□ -1.251e-6■■■■■ 59.7
SPTA1-201ENST00000368147 ASNA1O43681 348 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 IL1BP01584 269 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 POLBP06746 335 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 SRGNP10124 158 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 YWHAQP27348 245 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 STIP1P31948 543 aaKnown RBP7.26□□□□□ -1.25
SPTA1-201ENST00000368147 HALP42357 657 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 THOP1P52888 689 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 STOX1Q6ZVD7 989 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 FBXO33Q7Z6M2 555 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 RASAL3Q86YV0 1011 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 OR10G6Q8NH81 332 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 OSCP1Q8WVF1 389 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 CALR3Q96L12 384 aaKnown RBP7.26□□□□□ -1.25
SPTA1-201ENST00000368147 GULP1Q9UBP9 304 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 TFR2Q9UP52 801 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 PREX1Q8TCU6 1659 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 F8W810 466 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 PTPN1P18031 435 aaKnown RBP7.26□□□□□ -1.25
SPTA1-201ENST00000368147 PRIM2P49643 509 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 NUP107P57740 925 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 XRCC4Q13426 336 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 PDK1Q15118 436 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 TRADDQ15628 312 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 UGT3A1Q6NUS8 523 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 C3orf62Q6ZUJ4 267 aa7.26□□□□□ -1.25
SPTA1-201ENST00000368147 JAMLQ86YT9 394 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms