RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 MED7O43513 233 aa15.35■□□□□ 0.05
SF3B5-201ENST00000367569 GFPT2O94808 682 aa15.35■□□□□ 0.05
SF3B5-201ENST00000367569 NFATC1O95644 943 aa15.35■□□□□ 0.05
SF3B5-201ENST00000367569 EGFP01133 1207 aa15.35■□□□□ 0.05
SF3B5-201ENST00000367569 TCF3P15923 654 aa15.35■□□□□ 0.05
SF3B5-201ENST00000367569 HOXA6P31267 233 aa15.35■□□□□ 0.05
SF3B5-201ENST00000367569 CNR2P34972 360 aa15.35■□□□□ 0.05
SF3B5-201ENST00000367569 GPD2P43304 727 aa15.35■□□□□ 0.05
SF3B5-201ENST00000367569 MESP2Q0VG99 397 aa15.35■□□□□ 0.05
SF3B5-201ENST00000367569 PDCLQ13371 301 aa15.35■□□□□ 0.05
SF3B5-201ENST00000367569 GAB4Q2WGN9 574 aa15.35■□□□□ 0.05
SF3B5-201ENST00000367569 DDX42Q86XP3 938 aaKnown RBP eCLIP15.35■□□□□ 0.05
SF3B5-201ENST00000367569 SFTPA1Q8IWL2 248 aa15.35■□□□□ 0.05
SF3B5-201ENST00000367569 SLC20A1Q8WUM9 679 aa15.35■□□□□ 0.05
SF3B5-201ENST00000367569 KCTD13Q8WZ19 329 aa15.35■□□□□ 0.05
SF3B5-201ENST00000367569 POLR3BQ9NW08 1133 aaPredicted RBP15.35■□□□□ 0.05
SF3B5-201ENST00000367569 SFMBT1Q9UHJ3 866 aa15.35■□□□□ 0.05
SF3B5-201ENST00000367569 DNMT3LQ9UJW3 386 aa15.35■□□□□ 0.05
SF3B5-201ENST00000367569 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.35■□□□□ 0.05
SF3B5-201ENST00000367569 STC2O76061 302 aa15.34■□□□□ 0.05
SF3B5-201ENST00000367569 SDHBP21912 280 aa15.34■□□□□ 0.05
SF3B5-201ENST00000367569 PXNP49023 591 aaPredicted RBP15.34■□□□□ 0.05
SF3B5-201ENST00000367569 GALK1P51570 392 aa15.34■□□□□ 0.05
SF3B5-201ENST00000367569 GRSF1Q12849 480 aaKnown RBP eCLIP15.34■□□□□ 0.05
SF3B5-201ENST00000367569 IQCB1Q15051 598 aa15.34■□□□□ 0.05
SF3B5-201ENST00000367569 DHCR24Q15392 516 aa15.34■□□□□ 0.05
SF3B5-201ENST00000367569 LY6G5CQ5SRR4 150 aa15.34■□□□□ 0.05
SF3B5-201ENST00000367569 BSPRYQ5W0U4 402 aa15.34■□□□□ 0.05
SF3B5-201ENST00000367569 PM20D1Q6GTS8 502 aa15.34■□□□□ 0.05
SF3B5-201ENST00000367569 NOP9Q86U38 636 aaKnown RBP15.34■□□□□ 0.05
SF3B5-201ENST00000367569 WDR5BQ86VZ2 330 aa15.34■□□□□ 0.05
SF3B5-201ENST00000367569 SCUBE3Q8IX30 993 aa15.34■□□□□ 0.05
SF3B5-201ENST00000367569 FAM71AQ8IYT1 594 aa15.34■□□□□ 0.05
SF3B5-201ENST00000367569 NAT16Q8N8M0 369 aa15.34■□□□□ 0.05
SF3B5-201ENST00000367569 EZH1Q92800 747 aaPredicted RBP15.34■□□□□ 0.05
SF3B5-201ENST00000367569 FAM149B1Q96BN6 582 aa15.34■□□□□ 0.05
SF3B5-201ENST00000367569 FAM81BQ96LP2 452 aa15.34■□□□□ 0.05
SF3B5-201ENST00000367569 CPXM1Q96SM3 734 aa15.34■□□□□ 0.05
SF3B5-201ENST00000367569 BPIFA3Q9BQP9 254 aa15.34■□□□□ 0.05
SF3B5-201ENST00000367569 UBXN6Q9BZV1 441 aa15.34■□□□□ 0.05
SF3B5-201ENST00000367569 ZDHHC4Q9NPG8 344 aa15.34■□□□□ 0.05
SF3B5-201ENST00000367569 CLIC5Q9NZA1 410 aa15.34■□□□□ 0.05
SF3B5-201ENST00000367569 MARCH2Q9P0N8 246 aa15.34■□□□□ 0.05
SF3B5-201ENST00000367569 TPRP12270 2363 aaKnown RBP15.34■□□□□ 0.05
SF3B5-201ENST00000367569 SPAG17Q6Q759 2223 aa15.33■□□□□ 0.05
SF3B5-201ENST00000367569 E2F8A0AVK6 867 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 DCDC2BA2VCK2 349 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 PAPSS1O43252 624 aaPredicted RBP15.33■□□□□ 0.04
SF3B5-201ENST00000367569 GREM1O60565 184 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 LTFP02788 710 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 ADH5P11766 374 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 PTMSP20962 102 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 CORO1AP31146 461 aaKnown RBP15.33■□□□□ 0.04
SF3B5-201ENST00000367569 OPRD1P41143 372 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 SLC6A11P48066 632 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 PSEN1P49768 467 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 SEC13P55735 322 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 PTK2Q05397 1052 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 ANO4Q32M45 955 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 C2CD6Q53TS8 623 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 TPGS1Q6ZTW0 290 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.33■□□□□ 0.04
SF3B5-201ENST00000367569 FMNL3Q8IVF7 1028 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 ARHGAP18Q8N392 663 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 WDTC1Q8N5D0 677 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 FAM160A2Q8N612 972 aaPredicted RBP15.33■□□□□ 0.04
SF3B5-201ENST00000367569 NEK11Q8NG66 645 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 ADAM32Q8TC27 787 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 RNF139Q8WU17 664 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 P2RY11Q96G91 374 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 P2RY13Q9BPV8 354 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 PDCL3Q9H2J4 239 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 CNGB3Q9NQW8 809 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 SEMA4GQ9NTN9 838 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 PLK2Q9NYY3 685 aa15.33■□□□□ 0.04
SF3B5-201ENST00000367569 LSM7Q9UK45 103 aaKnown RBP15.33■□□□□ 0.04
SF3B5-201ENST00000367569 CDV3Q9UKY7 258 aaKnown RBP15.33■□□□□ 0.04
SF3B5-201ENST00000367569 SMTNL1A8MU46 457 aa15.32■□□□□ 0.04
SF3B5-201ENST00000367569 NEDD8-MDP1E9PL57 170 aa15.32■□□□□ 0.04
SF3B5-201ENST00000367569 TRIM24O15164 1050 aa15.32■□□□□ 0.04
SF3B5-201ENST00000367569 LRP3O75074 770 aa15.32■□□□□ 0.04
SF3B5-201ENST00000367569 RNF40O75150 1001 aa15.32■□□□□ 0.04
SF3B5-201ENST00000367569 GRAP2O75791 330 aa15.32■□□□□ 0.04
SF3B5-201ENST00000367569 KLKB1P03952 638 aa15.32■□□□□ 0.04
SF3B5-201ENST00000367569 ERBB2P04626 1255 aa15.32■□□□□ 0.04
SF3B5-201ENST00000367569 MMEP08473 750 aa15.32■□□□□ 0.04
SF3B5-201ENST00000367569 CYP11B1P15538 503 aa15.32■□□□□ 0.04
SF3B5-201ENST00000367569 KRT9P35527 623 aa15.32■□□□□ 0.04
SF3B5-201ENST00000367569 AMPD2Q01433 879 aa15.32■□□□□ 0.04
SF3B5-201ENST00000367569 ARID5AQ03989 594 aa15.32■□□□□ 0.04
SF3B5-201ENST00000367569 GOLGA8FQ08AF8 430 aa15.32■□□□□ 0.04
SF3B5-201ENST00000367569 GOLGA8DPQ0D2H9 430 aa15.32■□□□□ 0.04
SF3B5-201ENST00000367569 TAF5Q15542 800 aa15.32■□□□□ 0.04
SF3B5-201ENST00000367569 PTPN20Q4JDL3 420 aa15.32■□□□□ 0.04
SF3B5-201ENST00000367569 RHBDF2Q6PJF5 856 aa15.32■□□□□ 0.04
SF3B5-201ENST00000367569 FAM183BPQ6ZVS7 135 aa15.32■□□□□ 0.04
SF3B5-201ENST00000367569 CEP68Q76N32 757 aa15.32■□□□□ 0.04
SF3B5-201ENST00000367569 TMEM25Q86YD3 366 aa15.32■□□□□ 0.04
SF3B5-201ENST00000367569 DENND1CQ8IV53 801 aa15.32■□□□□ 0.04
SF3B5-201ENST00000367569 EPS8L1Q8TE68 723 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms