RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 FNBP1LQ5T0N5 605 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 DEPDC1Q5TB30 811 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 CDCA2Q69YH5 1023 aaPredicted RBP0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 DPY19L3Q6ZPD9 716 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 MIGA2Q7L4E1 593 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 ADGRA1Q86SQ6 560 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 CDC20BQ86Y33 519 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 ZNF584Q8IVC4 421 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 RHOT1Q8IXI2 618 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 ZNF440Q8IYI8 595 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 SRBD1Q8N5C6 995 aaKnown RBP0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 PNPLA1Q8N8W4 532 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 LILRB1Q8NHL6 650 aaPredicted RBP0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 HCAR2Q8TDS4 363 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 TSPEARQ8WU66 669 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 MFSD3Q96ES6 412 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 ASCL2Q99929 193 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 ZNF518BQ9C0D4 1074 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 PDZD7Q9H5P4 517 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 GPR35Q9HC97 309 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 ZNF334Q9HCZ1 680 aaPredicted RBP0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 DMRT3Q9NQL9 472 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 CPNE7Q9UBL6 633 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 CELA1Q9UNI1 258 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 SSX2IPQ9Y2D8 614 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 KDM2BQ8NHM5 1336 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 IGLV3-10A0A075B6K4 115 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 DPPA5A6NC42 116 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 HMX3A6NHT5 357 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 A6NNC1 897 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 KRTAP16-1A8MUX0 517 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 CLIC1O00299 241 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 VWA5AO00534 786 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 KLF4O43474 513 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 KIF1CO43896 1103 aaKnown RBP0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 DHX16O60231 1041 aaKnown RBP0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 PMPCBO75439 489 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 KIF20AO95235 890 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 IGKV3-15P01624 115 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 ATP1A1P05023 1023 aaKnown RBP0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 GJB1P08034 283 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 RARBP10826 455 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 ARSBP15848 533 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 GATA1P15976 413 aaPredicted RBP0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 PRPH2P23942 346 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 CYP2C19P33261 490 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 LSSP48449 732 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 DIO1P49895 249 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 MTHFSP49914 203 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 PEX5P50542 639 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 ABATP80404 500 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 CDC42EP1Q00587 391 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 SP2Q02086 613 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 DSG1Q02413 1049 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 MTA1Q13330 715 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 ZNF460Q14592 562 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 IQCB1Q15051 598 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 ST3GAL2Q16842 350 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 CCDC27Q2M243 656 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 LONRF3Q496Y0 759 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 FNDC3BQ53EP0 1204 aaKnown RBP0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 CCDC93Q567U6 631 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 FSCBQ5H9T9 825 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 EFHC1Q5JVL4 640 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 FAM160B1Q5W0V3 765 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 NHLRC1Q6VVB1 395 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 RBM44Q6ZP01 1051 aaKnown RBP0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 SLC26A9Q7LBE3 791 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 PPP1R32Q7Z5V6 425 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 RASSF3Q86WH2 238 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 EPHX4Q8IUS5 362 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 DDIASQ8IXT1 998 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 IZUMO1Q8IYV9 350 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 AHI1Q8N157 1196 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 LINC00612Q8N6U2 182 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 ANKRD44Q8N8A2 993 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 SPATA20Q8TB22 786 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 ADAMTS14Q8WXS8 1223 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 KAT2BQ92831 832 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 INPP5DQ92835 1189 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 ZNF501Q96CX3 271 aaPredicted RBP0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 URB1-AS1Q96HZ7 61 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 F2RL3Q96RI0 385 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 ARID3AQ99856 593 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 RBM4BQ9BQ04 359 aaKnown RBP0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 TM2D2Q9BX73 214 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 UNKQ9C0B0 810 aaKnown RBP0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 EVA1AQ9H8M9 152 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 MOV10Q9HCE1 1003 aaKnown RBP0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 MAN1C1Q9NR34 630 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 SIDT1Q9NXL6 827 aaKnown RBP0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 COL20A1Q9P218 1284 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 SAP30BPQ9UHR5 308 aaKnown RBP0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 EDARQ9UNE0 448 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 SHOC2Q9UQ13 582 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 KCNK7Q9Y2U2 307 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 MSRB2Q9Y3D2 182 aa0.32□□□□□ -2.36
RNU6-54P-201ENST00000365563 A0A0U1RQF3 1178 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 LOC105378220A0A1B0GUY1 285 aaPredicted RBP0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms