RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 TMEM199Q8N511 208 aa19.13■□□□□ 0.65
CLIP2-202ENST00000361545 UTP6Q9NYH9 597 aaKnown RBP19.13■□□□□ 0.65
CLIP2-202ENST00000361545 RRN3Q9NYV6 651 aa19.13■□□□□ 0.65
CLIP2-202ENST00000361545 NCAM2O15394 837 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 TIMM44O43615 452 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 ALOX15P16050 662 aaPredicted RBP19.12■□□□□ 0.65
CLIP2-202ENST00000361545 PLCL1Q15111 1095 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.12■□□□□ 0.65
CLIP2-202ENST00000361545 FBXO25Q8TCJ0 367 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 KAT5Q92993 513 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 ZNF558Q96NG5 402 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 PRPF18Q99633 342 aaKnown RBP19.12■□□□□ 0.65
CLIP2-202ENST00000361545 UNKQ9C0B0 810 aaKnown RBP19.12■□□□□ 0.65
CLIP2-202ENST00000361545 VANGL2Q9ULK5 521 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 MORC2Q9Y6X9 1032 aaPredicted RBP19.12■□□□□ 0.65
CLIP2-202ENST00000361545 KCNK1O00180 336 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 AKAP10O43572 662 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 PLA2G6O60733 806 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 HPCAP84074 193 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 ACTN3Q08043 901 aaPredicted RBP19.12■□□□□ 0.65
CLIP2-202ENST00000361545 CAPSQ13938 189 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 JADE3Q92613 823 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 UXTQ9UBK9 157 aaPredicted RBP19.12■□□□□ 0.65
CLIP2-202ENST00000361545 DRG1Q9Y295 367 aaKnown RBP19.12■□□□□ 0.65
CLIP2-202ENST00000361545 V9GYQ6 96 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 LTFP02788 710 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 PTPN1P18031 435 aaKnown RBP19.12■□□□□ 0.65
CLIP2-202ENST00000361545 SERPINB8P50452 374 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 TMEM86AQ8N2M4 240 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 TUBGCP3Q96CW5 907 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 MTMR8Q96EF0 704 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 SERPINB12Q96P63 405 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 FAM167BQ9BTA0 163 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 TKTL2Q9H0I9 626 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 ITGB6P18564 788 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 MAGEA9P43362 315 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 EFL1Q7Z2Z2 1120 aaKnown RBP19.12■□□□□ 0.65
CLIP2-202ENST00000361545 ACTRT1Q8TDG2 376 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 THTPAQ9BU02 230 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 TNFSF13BQ9Y275 285 aa19.12■□□□□ 0.65
CLIP2-202ENST00000361545 YBX3P16989 372 aaKnown RBP eCLIP19.11■□□□□ 0.65
CLIP2-202ENST00000361545 RFX3P48380 749 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 ERAP2Q6P179 960 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 FAM162AQ96A26 154 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 WHRNQ9P202 907 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 NEURL4Q96JN8 1562 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 SPATA31C2B4DYI2 1134 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 GLRA3O75311 464 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 KLHL2O95198 593 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 SEC24CP53992 1094 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 HDAC4P56524 1084 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 LRRC36Q1X8D7 754 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 NAT9Q9BTE0 207 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 POPDC2Q9HBU9 364 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 TBC1D13Q9NVG8 400 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 TMEM88BA6NKF7 163 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 TNFSF9P41273 254 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 TATDN1Q6P1N9 297 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 PRPF39Q86UA1 669 aaKnown RBP19.11■□□□□ 0.65
CLIP2-202ENST00000361545 TBCBQ99426 244 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 GPAMQ9HCL2 828 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 ST3GAL5Q9UNP4 418 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 CFAP73A6NFT4 308 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 CPA2P48052 419 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 ABHD8Q96I13 439 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 C6orf203Q9P0P8 240 aaPredicted RBP19.11■□□□□ 0.65
CLIP2-202ENST00000361545 MTO1Q9Y2Z2 717 aaKnown RBP19.11■□□□□ 0.65
CLIP2-202ENST00000361545 TRIM66O15016 1216 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 CAPN15O75808 1086 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 APOA4P06727 396 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 ADRB2P07550 413 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 CSHL1Q14406 222 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 GALNTL6Q49A17 601 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 WDR59Q6PJI9 974 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 OR9Q1Q8NGQ5 310 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 ILKAPQ9H0C8 392 aaPredicted RBP19.11■□□□□ 0.65
CLIP2-202ENST00000361545 CDT1Q9H211 546 aa19.11■□□□□ 0.65
CLIP2-202ENST00000361545 DDX3XO00571 662 aaKnown RBP eCLIP19.1■□□□□ 0.654e-7■■■■□ 23.9
CLIP2-202ENST00000361545 RENBPP51606 427 aa19.1■□□□□ 0.65
CLIP2-202ENST00000361545 PLPPR4Q7Z2D5 763 aa19.1■□□□□ 0.65
CLIP2-202ENST00000361545 TMEM161BQ8NDZ6 487 aa19.1■□□□□ 0.65
CLIP2-202ENST00000361545 ACP6Q9NPH0 428 aa19.1■□□□□ 0.65
CLIP2-202ENST00000361545 MARCH2Q9P0N8 246 aa19.1■□□□□ 0.65
CLIP2-202ENST00000361545 YDJCA8MPS7 323 aa19.1■□□□□ 0.65
CLIP2-202ENST00000361545 B2RBV5 119 aa19.1■□□□□ 0.65
CLIP2-202ENST00000361545 EIF3HO15372 352 aaKnown RBP eCLIP19.1■□□□□ 0.652e-6■■□□□ 13.4
CLIP2-202ENST00000361545 CTNNB1P35222 781 aa19.1■□□□□ 0.65
CLIP2-202ENST00000361545 NT5DC1Q5TFE4 455 aa19.1■□□□□ 0.65
CLIP2-202ENST00000361545 LONP2Q86WA8 852 aa19.1■□□□□ 0.65
CLIP2-202ENST00000361545 PAFAH2Q99487 392 aa19.1■□□□□ 0.65
CLIP2-202ENST00000361545 A8MX80 341 aa19.1■□□□□ 0.65
CLIP2-202ENST00000361545 B4GALT5O43286 388 aa19.1■□□□□ 0.65
CLIP2-202ENST00000361545 HMGCRP04035 888 aa19.1■□□□□ 0.65
CLIP2-202ENST00000361545 MPP3Q13368 585 aa19.1■□□□□ 0.65
CLIP2-202ENST00000361545 CMTM5Q96DZ9 223 aa19.1■□□□□ 0.65
CLIP2-202ENST00000361545 CDC42EP4Q9H3Q1 356 aaKnown RBP19.1■□□□□ 0.65
CLIP2-202ENST00000361545 EVPLLA8MZ36 301 aa19.1■□□□□ 0.65
CLIP2-202ENST00000361545 MIPP30301 263 aa19.1■□□□□ 0.65
CLIP2-202ENST00000361545 LSP1P33241 339 aa19.1■□□□□ 0.65
CLIP2-202ENST00000361545 BMPR2Q13873 1038 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms