RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 UROC1Q96N76 676 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 QKIQ96PU8 341 aaKnown RBP eCLIP18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 SLC9A7Q96T83 725 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 RAB6BQ9NRW1 208 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 RRN3Q9NYV6 651 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 DSEQ9UL01 958 aa18.98■□□□□ 0.63
PDLIM7-203ENST00000359895 ZNF638Q14966 1978 aaKnown RBP18.97■□□□□ 0.63
PDLIM7-203ENST00000359895 SF3B1O75533 1304 aaKnown RBP eCLIP18.97■□□□□ 0.633e-7■■■■■ 40.8
PDLIM7-203ENST00000359895 C9IYK1 514 aa18.97■□□□□ 0.63
PDLIM7-203ENST00000359895 BANF1O75531 89 aa18.97■□□□□ 0.63
PDLIM7-203ENST00000359895 GCATO75600 419 aa18.97■□□□□ 0.63
PDLIM7-203ENST00000359895 HSPA1AP0DMV8 641 aaKnown RBP18.97■□□□□ 0.63
PDLIM7-203ENST00000359895 HSPA1BP0DMV9 641 aaKnown RBP18.97■□□□□ 0.63
PDLIM7-203ENST00000359895 GHRP10912 638 aa18.97■□□□□ 0.63
PDLIM7-203ENST00000359895 PRKAR2AP13861 404 aaKnown RBP18.97■□□□□ 0.63
PDLIM7-203ENST00000359895 CREB1P16220 341 aa18.97■□□□□ 0.63
PDLIM7-203ENST00000359895 DAOAP59103 153 aa18.97■□□□□ 0.63
PDLIM7-203ENST00000359895 CKAP2Q8WWK9 683 aa18.97■□□□□ 0.63
PDLIM7-203ENST00000359895 SMARCD1Q96GM5 515 aa18.97■□□□□ 0.63
PDLIM7-203ENST00000359895 CABS1Q96KC9 395 aa18.97■□□□□ 0.63
PDLIM7-203ENST00000359895 ETNK2Q9NVF9 386 aa18.97■□□□□ 0.63
PDLIM7-203ENST00000359895 SMG5Q9UPR3 1016 aaKnown RBP18.97■□□□□ 0.63
PDLIM7-203ENST00000359895 USP3Q9Y6I4 520 aa18.97■□□□□ 0.63
PDLIM7-203ENST00000359895 FRMPD3Q5JV73 1810 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 FAM47DPA6NHR8 397 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 CASTOR2A6NHX0 329 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 M0QYT0 321 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 PRPF4O43172 522 aaKnown RBP eCLIP18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 CYP11A1P05108 521 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 VIMP08670 466 aaKnown RBP18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 KRT15P19012 456 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 IFNAR2P48551 515 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 DEUP1Q05D60 604 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 LPIN1Q14693 890 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 RAB41Q5JT25 222 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 NCBP2-AS2Q69YL0 99 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 CAPN12Q6ZSI9 719 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 FAM131BQ86XD5 332 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 LRRC34Q8IZ02 419 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 OTUD6BQ8N6M0 293 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 ANKRD42Q8N9B4 389 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 C3orf58Q8NDZ4 430 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 MCUQ8NE86 351 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 FBF1Q8TES7 1133 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 PCED1BQ96HM7 432 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 SMC6Q96SB8 1091 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 SMOQ99835 787 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 FERMT1Q9BQL6 677 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 ULBP1Q9BZM6 244 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 TRABDQ9H4I3 376 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 SAMD15Q9P1V8 674 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 CACNG4Q9UBN1 327 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 NOD1Q9Y239 953 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 TEX264Q9Y6I9 313 aa18.96■□□□□ 0.63
PDLIM7-203ENST00000359895 PTPRDP23468 1912 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 PATJQ8NI35 1801 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 MYBPHLA2RUH7 354 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 CAPN9O14815 690 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 MGEA5O60502 916 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 MYCNP04198 464 aaPredicted RBP18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 GOT1P17174 413 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 TPSB2P20231 275 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 AMPD1P23109 780 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 IGFBP6P24592 240 aaPredicted RBP18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 SSTR1P30872 391 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 STX2P32856 288 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 MAP2K2P36507 400 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 ELK3P41970 407 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 NDUFV1P49821 464 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 AFF1P51825 1210 aaKnown RBP18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 NRLP54845 237 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 SP3Q02447 781 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 GBE1Q04446 702 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 TPSAB1Q15661 275 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 TIGD5Q53EQ6 642 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 OTUD1Q5VV17 481 aaPredicted RBP18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 HEATR6Q6AI08 1181 aaKnown RBP18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 ADGRD1Q6QNK2 874 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 KCNT2Q6UVM3 1135 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 PIGWQ7Z7B1 504 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 RNF180Q86T96 592 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 REM2Q8IYK8 340 aaPredicted RBP18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 VPS52Q8N1B4 723 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 ANKS4BQ8N8V4 417 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 CCDC197Q8NCU1 140 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 MGARPQ8TDB4 240 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 NDRG1Q92597 394 aaKnown RBP18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 NTAN1Q96AB6 310 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 LRRC39Q96DD0 335 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 CYTH2Q99418 400 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 ADAM2Q99965 735 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 ACBD6Q9BR61 282 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 DHRS4Q9BTZ2 278 aa18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 SSU72Q9NP77 194 aaKnown RBP18.95■□□□□ 0.62
PDLIM7-203ENST00000359895 GOLGA6L7A0A1B0GV03 622 aa18.94■□□□□ 0.62
PDLIM7-203ENST00000359895 DGKIO75912 1065 aa18.94■□□□□ 0.62
PDLIM7-203ENST00000359895 GSTA2P09210 222 aa18.94■□□□□ 0.62
PDLIM7-203ENST00000359895 MSH2P43246 934 aa18.94■□□□□ 0.62
PDLIM7-203ENST00000359895 SLC10A2Q12908 348 aaPredicted RBP18.94■□□□□ 0.62
PDLIM7-203ENST00000359895 TUSC3Q13454 348 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms