RNA–Protein interactions for RNA: ENST00000358779.9

CDK11A-204, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK11A, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-204ENST00000358779 ARMCX1Q9P291 453 aa18.42■□□□□ 0.54
CDK11A-204ENST00000358779 TFE3P19532 575 aaPredicted RBP18.41■□□□□ 0.54
CDK11A-204ENST00000358779 GBE1Q04446 702 aa18.41■□□□□ 0.54
CDK11A-204ENST00000358779 ARHGAP1Q07960 439 aa18.41■□□□□ 0.54
CDK11A-204ENST00000358779 KPNB1Q14974 876 aaKnown RBP18.41■□□□□ 0.54
CDK11A-204ENST00000358779 TEX44Q53QW1 395 aa18.41■□□□□ 0.54
CDK11A-204ENST00000358779 GJC2Q5T442 439 aaPredicted RBP18.41■□□□□ 0.54
CDK11A-204ENST00000358779 CES4AQ5XG92 561 aa18.41■□□□□ 0.54
CDK11A-204ENST00000358779 TRMT10BQ6PF06 316 aaKnown RBP18.41■□□□□ 0.54
CDK11A-204ENST00000358779 NLRP7Q8WX94 980 aa18.41■□□□□ 0.54
CDK11A-204ENST00000358779 MMADHCQ9H3L0 296 aaPredicted RBP18.41■□□□□ 0.54
CDK11A-204ENST00000358779 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.41■□□□□ 0.54
CDK11A-204ENST00000358779 GCATO75600 419 aa18.41■□□□□ 0.54
CDK11A-204ENST00000358779 RARBP10826 455 aa18.41■□□□□ 0.54
CDK11A-204ENST00000358779 OCRLQ01968 901 aa18.41■□□□□ 0.54
CDK11A-204ENST00000358779 TSNAXIP1Q2TAA8 658 aa18.41■□□□□ 0.54
CDK11A-204ENST00000358779 ACSBG2Q5FVE4 666 aa18.41■□□□□ 0.54
CDK11A-204ENST00000358779 ARID3BQ8IVW6 561 aaPredicted RBP18.41■□□□□ 0.54
CDK11A-204ENST00000358779 GPC2Q8N158 579 aa18.41■□□□□ 0.54
CDK11A-204ENST00000358779 TEX9Q8N6V9 391 aa18.41■□□□□ 0.54
CDK11A-204ENST00000358779 SLC35F5Q8WV83 523 aa18.41■□□□□ 0.54
CDK11A-204ENST00000358779 STOML1Q9UBI4 398 aa18.41■□□□□ 0.54
CDK11A-204ENST00000358779 HESX1Q9UBX0 185 aa18.41■□□□□ 0.54
CDK11A-204ENST00000358779 CYB561D2O14569 222 aa18.4■□□□□ 0.54
CDK11A-204ENST00000358779 GABBR2O75899 941 aa18.4■□□□□ 0.54
CDK11A-204ENST00000358779 L1CAMP32004 1257 aa18.4■□□□□ 0.54
CDK11A-204ENST00000358779 RCN1Q15293 331 aa18.4■□□□□ 0.54
CDK11A-204ENST00000358779 CCDC6Q16204 474 aa18.4■□□□□ 0.54
CDK11A-204ENST00000358779 DPYSL2Q16555 572 aa18.4■□□□□ 0.54
CDK11A-204ENST00000358779 NUDCD3Q8IVD9 361 aa18.4■□□□□ 0.54
CDK11A-204ENST00000358779 MICAL1Q8TDZ2 1067 aa18.4■□□□□ 0.54
CDK11A-204ENST00000358779 QKIQ96PU8 341 aaKnown RBP eCLIP18.4■□□□□ 0.54
CDK11A-204ENST00000358779 B3GNT5Q9BYG0 378 aa18.4■□□□□ 0.54
CDK11A-204ENST00000358779 TRIM6Q9C030 488 aaPredicted RBP18.4■□□□□ 0.54
CDK11A-204ENST00000358779 DHX35Q9H5Z1 703 aaKnown RBP18.4■□□□□ 0.54
CDK11A-204ENST00000358779 NME7Q9Y5B8 376 aa18.4■□□□□ 0.54
CDK11A-204ENST00000358779 PCDHA11Q9Y5I1 949 aa18.4■□□□□ 0.54
CDK11A-204ENST00000358779 SNX9Q9Y5X1 595 aa18.4■□□□□ 0.54
CDK11A-204ENST00000358779 HMX2A2RU54 273 aa18.4■□□□□ 0.54
CDK11A-204ENST00000358779 A6NJR5 290 aa18.4■□□□□ 0.54
CDK11A-204ENST00000358779 ADM5C9JUS6 153 aa18.4■□□□□ 0.54
CDK11A-204ENST00000358779 KRT36O76013 467 aa18.4■□□□□ 0.54
CDK11A-204ENST00000358779 SERPINB9P50453 376 aa18.4■□□□□ 0.54
CDK11A-204ENST00000358779 SESN3P58005 492 aa18.4■□□□□ 0.54
CDK11A-204ENST00000358779 SLC10A2Q12908 348 aaPredicted RBP18.4■□□□□ 0.54
CDK11A-204ENST00000358779 MROH9Q5TGP6 573 aa18.4■□□□□ 0.54
CDK11A-204ENST00000358779 NDUFAF2Q8N183 169 aa18.4■□□□□ 0.54
CDK11A-204ENST00000358779 DEPDC1BQ8WUY9 529 aa18.4■□□□□ 0.54
CDK11A-204ENST00000358779 SRCAPQ6ZRS2 3230 aa18.39■□□□□ 0.54
CDK11A-204ENST00000358779 PPEF2O14830 753 aa18.39■□□□□ 0.53
CDK11A-204ENST00000358779 ACADSP16219 412 aa18.39■□□□□ 0.53
CDK11A-204ENST00000358779 ZFXP17010 805 aaPredicted RBP18.39■□□□□ 0.53
CDK11A-204ENST00000358779 GRM5P41594 1212 aa18.39■□□□□ 0.53
CDK11A-204ENST00000358779 PTPN9P43378 593 aa18.39■□□□□ 0.53
CDK11A-204ENST00000358779 SNX16P57768 344 aa18.39■□□□□ 0.53
CDK11A-204ENST00000358779 HSF5Q4G112 596 aaPredicted RBP18.39■□□□□ 0.53
CDK11A-204ENST00000358779 CCDC33Q8N5R6 958 aa18.39■□□□□ 0.53
CDK11A-204ENST00000358779 RAB3IL1Q8TBN0 382 aa18.39■□□□□ 0.53
CDK11A-204ENST00000358779 DNAJC9Q8WXX5 260 aa18.39■□□□□ 0.53
CDK11A-204ENST00000358779 CLMNQ96JQ2 1002 aa18.39■□□□□ 0.53
CDK11A-204ENST00000358779 OSBPL1AQ9BXW6 950 aa18.39■□□□□ 0.53
CDK11A-204ENST00000358779 WWP1Q9H0M0 922 aa18.39■□□□□ 0.53
CDK11A-204ENST00000358779 XAB2Q9HCS7 855 aaKnown RBP18.39■□□□□ 0.53
CDK11A-204ENST00000358779 RGS17Q9UGC6 210 aaPredicted RBP18.39■□□□□ 0.53
CDK11A-204ENST00000358779 AP4E1Q9UPM8 1137 aa18.39■□□□□ 0.53
CDK11A-204ENST00000358779 ZNF286BP0CG31 522 aa18.39■□□□□ 0.53
CDK11A-204ENST00000358779 CRHR1P34998 444 aa18.39■□□□□ 0.53
CDK11A-204ENST00000358779 CPA2P48052 419 aa18.39■□□□□ 0.53
CDK11A-204ENST00000358779 IREB2P48200 963 aaKnown RBP18.39■□□□□ 0.53
CDK11A-204ENST00000358779 ATXN1P54253 815 aaKnown RBP18.39■□□□□ 0.53
CDK11A-204ENST00000358779 MUM1Q2TAK8 710 aa18.39■□□□□ 0.53
CDK11A-204ENST00000358779 ZDHHC17Q8IUH5 632 aa18.39■□□□□ 0.53
CDK11A-204ENST00000358779 CLEC4CQ8WTT0 213 aa18.39■□□□□ 0.53
CDK11A-204ENST00000358779 CXCL16Q9H2A7 254 aa18.39■□□□□ 0.53
CDK11A-204ENST00000358779 ZNF395Q9H8N7 513 aaPredicted RBP18.39■□□□□ 0.53
CDK11A-204ENST00000358779 PPARGC1AQ9UBK2 798 aaKnown RBP18.39■□□□□ 0.53
CDK11A-204ENST00000358779 CAPN14A8MX76 684 aa18.38■□□□□ 0.53
CDK11A-204ENST00000358779 SNNO75324 88 aaPredicted RBP18.38■□□□□ 0.53
CDK11A-204ENST00000358779 SKAP2O75563 359 aaPredicted RBP18.38■□□□□ 0.53
CDK11A-204ENST00000358779 PSMG1O95456 288 aa18.38■□□□□ 0.53
CDK11A-204ENST00000358779 BPGMP07738 259 aa18.38■□□□□ 0.53
CDK11A-204ENST00000358779 VHLP40337 213 aa18.38■□□□□ 0.53
CDK11A-204ENST00000358779 GRIA1P42261 906 aa18.38■□□□□ 0.53
CDK11A-204ENST00000358779 CDK18Q07002 472 aa18.38■□□□□ 0.53
CDK11A-204ENST00000358779 SEMA5AQ13591 1074 aa18.38■□□□□ 0.53
CDK11A-204ENST00000358779 LAMC2Q13753 1193 aa18.38■□□□□ 0.53
CDK11A-204ENST00000358779 MTHFD1LQ6UB35 978 aa18.38■□□□□ 0.53
CDK11A-204ENST00000358779 KCNT2Q6UVM3 1135 aa18.38■□□□□ 0.53
CDK11A-204ENST00000358779 ARMCX2Q7L311 632 aa18.38■□□□□ 0.53
CDK11A-204ENST00000358779 ERO1BQ86YB8 467 aa18.38■□□□□ 0.53
CDK11A-204ENST00000358779 TREML1Q86YW5 311 aa18.38■□□□□ 0.53
CDK11A-204ENST00000358779 CRLF3Q8IUI8 442 aa18.38■□□□□ 0.53
CDK11A-204ENST00000358779 LMNTD2Q8IXW0 634 aa18.38■□□□□ 0.53
CDK11A-204ENST00000358779 ARHGAP24Q8N264 748 aa18.38■□□□□ 0.53
CDK11A-204ENST00000358779 STKLD1Q8NE28 680 aa18.38■□□□□ 0.53
CDK11A-204ENST00000358779 WDR60Q8WVS4 1066 aa18.38■□□□□ 0.53
CDK11A-204ENST00000358779 KCTD15Q96SI1 283 aaPredicted RBP18.38■□□□□ 0.53
CDK11A-204ENST00000358779 NMRK1Q9NWW6 199 aa18.38■□□□□ 0.53
CDK11A-204ENST00000358779 MARCOQ9UEW3 520 aaPredicted RBP18.38■□□□□ 0.53
CDK11A-204ENST00000358779 CORO1CQ9ULV4 474 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms