RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 MDM4O15151 490 aa16.21■□□□□ 0.19
TRIM13-201ENST00000356017 TRUB2O95900 331 aaKnown RBP16.21■□□□□ 0.19
TRIM13-201ENST00000356017 F9P00740 461 aa16.21■□□□□ 0.19
TRIM13-201ENST00000356017 CYP1A2P05177 515 aa16.21■□□□□ 0.19
TRIM13-201ENST00000356017 PTMAP06454 111 aaKnown RBP16.21■□□□□ 0.19
TRIM13-201ENST00000356017 TMEM253P0C7T8 217 aa16.21■□□□□ 0.19
TRIM13-201ENST00000356017 PSMC3P17980 439 aa16.21■□□□□ 0.19
TRIM13-201ENST00000356017 SDC4P31431 198 aa16.21■□□□□ 0.19
TRIM13-201ENST00000356017 RFC1P35251 1148 aaPredicted RBP16.21■□□□□ 0.19
TRIM13-201ENST00000356017 FLT3P36888 993 aa16.21■□□□□ 0.19
TRIM13-201ENST00000356017 MAGEA1P43355 309 aa16.21■□□□□ 0.19
TRIM13-201ENST00000356017 KRT83P78385 493 aa16.21■□□□□ 0.19
TRIM13-201ENST00000356017 PPP1R15BQ5SWA1 713 aa16.21■□□□□ 0.19
TRIM13-201ENST00000356017 CC2D1AQ6P1N0 951 aaPredicted RBP16.21■□□□□ 0.19
TRIM13-201ENST00000356017 PLD4Q96BZ4 506 aa16.21■□□□□ 0.19
TRIM13-201ENST00000356017 ZFRQ96KR1 1074 aaKnown RBP16.21■□□□□ 0.19
TRIM13-201ENST00000356017 MCEEQ96PE7 176 aa16.21■□□□□ 0.19
TRIM13-201ENST00000356017 NPY6RQ99463 290 aa16.21■□□□□ 0.19
TRIM13-201ENST00000356017 KXD1Q9BQD3 176 aa16.21■□□□□ 0.19
TRIM13-201ENST00000356017 GKN1Q9NS71 199 aa16.21■□□□□ 0.19
TRIM13-201ENST00000356017 TLR6Q9Y2C9 796 aa16.21■□□□□ 0.19
TRIM13-201ENST00000356017 DENND4CQ5VZ89 1909 aa16.21■□□□□ 0.19
TRIM13-201ENST00000356017 ANAPC1Q9H1A4 1944 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 E2F8A0AVK6 867 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 ARHGAP6O43182 974 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 ATMINO43313 823 aaPredicted RBP16.2■□□□□ 0.18
TRIM13-201ENST00000356017 HARS2P49590 506 aaKnown RBP16.2■□□□□ 0.18
TRIM13-201ENST00000356017 ZXDBP98169 803 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 RING1Q06587 406 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 FCHO2Q0JRZ9 810 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 CCDC173Q0VFZ6 552 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 USP4Q13107 963 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 TRIP4Q15650 581 aaPredicted RBP16.2■□□□□ 0.18
TRIM13-201ENST00000356017 ZNF77Q15935 545 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 RAD9BQ6WBX8 426 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 UNC45BQ8IWX7 931 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 YAF2Q8IY57 180 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 GJD3Q8N144 294 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 TXLNBQ8N3L3 684 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 EMC1Q8N766 993 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 JOSD2Q8TAC2 188 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 RXFP2Q8WXD0 754 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 PGAP3Q96FM1 320 aaPredicted RBP16.2■□□□□ 0.18
TRIM13-201ENST00000356017 DCLK3Q9C098 648 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 FAM204AQ9H8W3 233 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 DDIT4Q9NX09 232 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 CFAP97Q9P2B7 532 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 TBC1D14Q9P2M4 693 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 UVRAGQ9P2Y5 699 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 LSM7Q9UK45 103 aaKnown RBP16.2■□□□□ 0.18
TRIM13-201ENST00000356017 PAXBP1Q9Y5B6 917 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 PCDHA13Q9Y5I0 950 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 C5orf42Q9H799 3197 aa16.2■□□□□ 0.18
TRIM13-201ENST00000356017 TMEM191CA6NGB0 347 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 M0QYT0 321 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 SLC9A3R1O14745 358 aaPredicted RBP16.19■□□□□ 0.18
TRIM13-201ENST00000356017 IRAK2O43187 625 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 STC2O76061 302 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 IGLV3-25P01717 112 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 SLC2A3P11169 496 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 GPD1P21695 349 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 PTPN9P43378 593 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 SULT1E1P49888 294 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 ZNF143P52747 638 aaPredicted RBP16.19■□□□□ 0.18
TRIM13-201ENST00000356017 TBX4P57082 545 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 RPL7AP62424 266 aaKnown RBP16.19■□□□□ 0.18
TRIM13-201ENST00000356017 MTA1Q13330 715 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 MTF1Q14872 753 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 NUGGCQ68CJ6 796 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 VITQ6UXI7 678 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 SND1Q7KZF4 910 aaKnown RBP eCLIP16.19■□□□□ 0.18
TRIM13-201ENST00000356017 TAC4Q86UU9 113 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 RHOT2Q8IXI1 618 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 TTC16Q8NEE8 873 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 FNIP1Q8TF40 1166 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 CFAP57Q96MR6 1250 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 TRMT61BQ9BVS5 477 aaKnown RBP16.19■□□□□ 0.18
TRIM13-201ENST00000356017 PACSIN1Q9BY11 444 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 ZNF510Q9Y2H8 683 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 MSI1O43347 362 aaKnown RBP16.19■□□□□ 0.18
TRIM13-201ENST00000356017 GJB6O95452 261 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 EIF4EBP2Q13542 120 aaPredicted RBP16.19■□□□□ 0.18
TRIM13-201ENST00000356017 TDGQ13569 410 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 ARHGAP29Q52LW3 1261 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 HTR3DQ70Z44 454 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 SLC44A3Q8N4M1 653 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 ADAM32Q8TC27 787 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 ADAMTS19Q8TE59 1207 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 RSAD2Q8WXG1 361 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 OTUB2Q96DC9 234 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 RSPRY1Q96DX4 576 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 CNPY3Q9BT09 278 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 RPP25Q9BUL9 199 aaKnown RBP16.19■□□□□ 0.18
TRIM13-201ENST00000356017 NUP85Q9BW27 656 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.19■□□□□ 0.18
TRIM13-201ENST00000356017 CTTNBP2NLQ9P2B4 639 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 LCMT1Q9UIC8 334 aa16.19■□□□□ 0.18
TRIM13-201ENST00000356017 DOCK8Q8NF50 2099 aa16.18■□□□□ 0.18
TRIM13-201ENST00000356017 CHADO15335 359 aa16.18■□□□□ 0.18
TRIM13-201ENST00000356017 IGLV3-27P01718 113 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms