RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 XPO6Q96QU8 1125 aaKnown RBP16.69■□□□□ 0.26
PDGFA-201ENST00000354513 WDR35Q9P2L0 1181 aa16.69■□□□□ 0.26
PDGFA-201ENST00000354513 DNMT3LQ9UJW3 386 aa16.69■□□□□ 0.26
PDGFA-201ENST00000354513 NAGPAQ9UK23 515 aa16.69■□□□□ 0.26
PDGFA-201ENST00000354513 LSM7Q9UK45 103 aaKnown RBP16.69■□□□□ 0.26
PDGFA-201ENST00000354513 PSMC2P35998 433 aaKnown RBP16.68■□□□□ 0.26
PDGFA-201ENST00000354513 PLA2G4AP47712 749 aa16.68■□□□□ 0.26
PDGFA-201ENST00000354513 RAD23BP54727 409 aa16.68■□□□□ 0.26
PDGFA-201ENST00000354513 LMAN2Q12907 356 aa16.68■□□□□ 0.26
PDGFA-201ENST00000354513 BYSLQ13895 437 aaKnown RBP16.68■□□□□ 0.26
PDGFA-201ENST00000354513 GEN1Q17RS7 908 aa16.68■□□□□ 0.26
PDGFA-201ENST00000354513 PREPLQ4J6C6 727 aaPredicted RBP16.68■□□□□ 0.26
PDGFA-201ENST00000354513 RAB41Q5JT25 222 aa16.68■□□□□ 0.26
PDGFA-201ENST00000354513 CHPFQ8IZ52 775 aa16.68■□□□□ 0.26
PDGFA-201ENST00000354513 RBBP8NLQ8NC74 664 aaPredicted RBP16.68■□□□□ 0.26
PDGFA-201ENST00000354513 MRGPRX1Q96LB2 322 aa16.68■□□□□ 0.26
PDGFA-201ENST00000354513 NUSAP1Q9BXS6 441 aaKnown RBP16.68■□□□□ 0.26
PDGFA-201ENST00000354513 IMPG2Q9BZV3 1241 aa16.68■□□□□ 0.26
PDGFA-201ENST00000354513 CLIC5Q9NZA1 410 aa16.68■□□□□ 0.26
PDGFA-201ENST00000354513 CLEC4EQ9ULY5 219 aa16.68■□□□□ 0.26
PDGFA-201ENST00000354513 CYP8B1Q9UNU6 501 aa16.68■□□□□ 0.26
PDGFA-201ENST00000354513 CACNA1EQ15878 2313 aa16.68■□□□□ 0.26
PDGFA-201ENST00000354513 PTPRBP23467 1997 aa16.67■□□□□ 0.26
PDGFA-201ENST00000354513 A0A1W2PQ27 194 aa16.67■□□□□ 0.26
PDGFA-201ENST00000354513 A0A1W2PQ64 194 aa16.67■□□□□ 0.26
PDGFA-201ENST00000354513 A0A1W2PQD8 194 aa16.67■□□□□ 0.26
PDGFA-201ENST00000354513 TULP2O00295 520 aa16.67■□□□□ 0.26
PDGFA-201ENST00000354513 AP5Z1O43299 807 aa16.67■□□□□ 0.26
PDGFA-201ENST00000354513 PROS1P07225 676 aa16.67■□□□□ 0.26
PDGFA-201ENST00000354513 KRT13P13646 458 aa16.67■□□□□ 0.26
PDGFA-201ENST00000354513 HOXD12P35452 270 aa16.67■□□□□ 0.26
PDGFA-201ENST00000354513 PSEN1P49768 467 aa16.67■□□□□ 0.26
PDGFA-201ENST00000354513 MFAP3P55082 362 aa16.67■□□□□ 0.26
PDGFA-201ENST00000354513 ZNF33AQ06730 810 aa16.67■□□□□ 0.26
PDGFA-201ENST00000354513 SEMA3BQ13214 749 aa16.67■□□□□ 0.26
PDGFA-201ENST00000354513 ADAM9Q13443 819 aa16.67■□□□□ 0.26
PDGFA-201ENST00000354513 ENPP2Q13822 863 aa16.67■□□□□ 0.26
PDGFA-201ENST00000354513 ARHGAP17Q68EM7 881 aa16.67■□□□□ 0.26
PDGFA-201ENST00000354513 KRT39Q6A163 491 aa16.67■□□□□ 0.26
PDGFA-201ENST00000354513 ZC3H3Q8IXZ2 948 aaKnown RBP16.67■□□□□ 0.26
PDGFA-201ENST00000354513 OR2I1PQ8NGU4 316 aa16.67■□□□□ 0.26
PDGFA-201ENST00000354513 TATDN2Q93075 761 aa16.67■□□□□ 0.26
PDGFA-201ENST00000354513 IPO9Q96P70 1041 aaKnown RBP16.67■□□□□ 0.26
PDGFA-201ENST00000354513 CISHQ9NSE2 258 aa16.67■□□□□ 0.26
PDGFA-201ENST00000354513 RASAL2Q9UJF2 1139 aa16.67■□□□□ 0.26
PDGFA-201ENST00000354513 SLC27A6Q9Y2P4 619 aa16.67■□□□□ 0.26
PDGFA-201ENST00000354513 PLXNB3Q9ULL4 1909 aa16.66■□□□□ 0.26
PDGFA-201ENST00000354513 PLXNA2O75051 1894 aa16.66■□□□□ 0.26
PDGFA-201ENST00000354513 KIF20AO95235 890 aa16.66■□□□□ 0.26
PDGFA-201ENST00000354513 HMBSP08397 361 aa16.66■□□□□ 0.26
PDGFA-201ENST00000354513 CORO1AP31146 461 aaKnown RBP16.66■□□□□ 0.26
PDGFA-201ENST00000354513 GTF2H1P32780 548 aa16.66■□□□□ 0.26
PDGFA-201ENST00000354513 MXI1P50539 228 aa16.66■□□□□ 0.26
PDGFA-201ENST00000354513 GOLGA8FQ08AF8 430 aa16.66■□□□□ 0.26
PDGFA-201ENST00000354513 GOLGA8DPQ0D2H9 430 aa16.66■□□□□ 0.26
PDGFA-201ENST00000354513 EFEMP1Q12805 493 aa16.66■□□□□ 0.26
PDGFA-201ENST00000354513 EDRF1Q3B7T1 1238 aa16.66■□□□□ 0.26
PDGFA-201ENST00000354513 CBWD6Q4V339 395 aa16.66■□□□□ 0.26
PDGFA-201ENST00000354513 CBWD3Q5JTY5 395 aa16.66■□□□□ 0.26
PDGFA-201ENST00000354513 CBWD5Q5RIA9 395 aa16.66■□□□□ 0.26
PDGFA-201ENST00000354513 UNQ6494/PRO21346Q6UXR6 183 aa16.66■□□□□ 0.26
PDGFA-201ENST00000354513 SLC36A4Q6YBV0 504 aa16.66■□□□□ 0.26
PDGFA-201ENST00000354513 PIGZQ86VD9 579 aa16.66■□□□□ 0.26
PDGFA-201ENST00000354513 FAM217AQ8IXS0 508 aa16.66■□□□□ 0.26
PDGFA-201ENST00000354513 NDRG1Q92597 394 aaKnown RBP16.66■□□□□ 0.26
PDGFA-201ENST00000354513 GATA6Q92908 595 aa16.66■□□□□ 0.26
PDGFA-201ENST00000354513 PIWIL1Q96J94 861 aaKnown RBP16.66■□□□□ 0.26
PDGFA-201ENST00000354513 HSPA12BQ96MM6 686 aa16.66■□□□□ 0.26
PDGFA-201ENST00000354513 GDPD2Q9HCC8 539 aa16.66■□□□□ 0.26
PDGFA-201ENST00000354513 AGO1Q9UL18 857 aaKnown RBP16.66■□□□□ 0.26
PDGFA-201ENST00000354513 SLC6A14Q9UN76 642 aa16.66■□□□□ 0.26
PDGFA-201ENST00000354513 STON1Q9Y6Q2 735 aa16.66■□□□□ 0.26
PDGFA-201ENST00000354513 UPK3BL1B0FP48 263 aa16.65■□□□□ 0.26
PDGFA-201ENST00000354513 UPK3BL2E5RIL1 263 aa16.65■□□□□ 0.26
PDGFA-201ENST00000354513 GFRA2O00451 464 aa16.65■□□□□ 0.26
PDGFA-201ENST00000354513 ZNF202O95125 648 aa16.65■□□□□ 0.26
PDGFA-201ENST00000354513 CFIP05156 583 aa16.65■□□□□ 0.26
PDGFA-201ENST00000354513 SERPINF2P08697 491 aa16.65■□□□□ 0.26
PDGFA-201ENST00000354513 RPL13P26373 211 aaKnown RBP16.65■□□□□ 0.26
PDGFA-201ENST00000354513 DPP6P42658 865 aa16.65■□□□□ 0.26
PDGFA-201ENST00000354513 IL12RB1P42701 662 aa16.65■□□□□ 0.26
PDGFA-201ENST00000354513 FAM193AP78312 1265 aa16.65■□□□□ 0.26
PDGFA-201ENST00000354513 DUOXA1Q1HG43 343 aa16.65■□□□□ 0.26
PDGFA-201ENST00000354513 FUT11Q495W5 492 aa16.65■□□□□ 0.26
PDGFA-201ENST00000354513 TMEM215Q68D42 235 aa16.65■□□□□ 0.26
PDGFA-201ENST00000354513 NUDT18Q6ZVK8 323 aa16.65■□□□□ 0.26
PDGFA-201ENST00000354513 UBR7Q8N806 425 aa16.65■□□□□ 0.26
PDGFA-201ENST00000354513 TRIML1Q8N9V2 468 aa16.65■□□□□ 0.26
PDGFA-201ENST00000354513 FBXL13Q8NEE6 735 aa16.65■□□□□ 0.26
PDGFA-201ENST00000354513 CCDC47Q96A33 483 aaKnown RBP16.65■□□□□ 0.26
PDGFA-201ENST00000354513 TMEM176AQ96HP8 235 aa16.65■□□□□ 0.26
PDGFA-201ENST00000354513 ADAM33Q9BZ11 813 aa16.65■□□□□ 0.26
PDGFA-201ENST00000354513 RAB20Q9NX57 234 aa16.65■□□□□ 0.26
PDGFA-201ENST00000354513 IGF2RP11717 2491 aa16.64■□□□□ 0.25
PDGFA-201ENST00000354513 SPAARA0A1B0GVQ0 90 aa16.64■□□□□ 0.25
PDGFA-201ENST00000354513 KCNJ18B7U540 433 aa16.64■□□□□ 0.25
PDGFA-201ENST00000354513 GJB3O75712 270 aa16.64■□□□□ 0.25
PDGFA-201ENST00000354513 RALAP11233 206 aa16.64■□□□□ 0.25
PDGFA-201ENST00000354513 PMS1P54277 932 aaKnown RBP16.64■□□□□ 0.25
PDGFA-201ENST00000354513 PNOCQ13519 176 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms