RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 MYL3P08590 195 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 UQCRBP14927 111 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 ATN1P54259 1190 aaPredicted RBP19.88■□□□□ 0.77
HDAC4-201ENST00000345617 MAPK11Q15759 364 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 SGO1Q5FBB7 561 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 XKR3Q5GH77 459 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 AKAP14Q86UN6 197 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 TSPAN14Q8NG11 270 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 KIAA1257Q9ULG3 409 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 R3HDM2Q9Y2K5 976 aaKnown RBP19.88■□□□□ 0.77
HDAC4-201ENST00000345617 HBS1LQ9Y450 684 aaKnown RBP19.88■□□□□ 0.77
HDAC4-201ENST00000345617 SSNA1O43805 119 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 DGKDQ16760 1214 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 ADGRE3Q9BY15 652 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 SUPT7LO94864 414 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 RPLP2P05387 115 aaKnown RBP19.88■□□□□ 0.77
HDAC4-201ENST00000345617 TSPAN19P0C672 248 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 PIK3CGP48736 1102 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 OLR1P78380 273 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 GNG14A0A1W2PPG7 69 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 Q4G0T1 1027 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 FBXO36Q8NEA4 188 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 ZNF398Q8TD17 642 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 EMILIN2Q9BXX0 1053 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 CCDC154A6NI56 674 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 RECQL5O94762 991 aaPredicted RBP19.88■□□□□ 0.77
HDAC4-201ENST00000345617 PRKCBP05771 671 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 ZRANB3Q5FWF4 1079 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 HS6ST3Q8IZP7 471 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 C8orf59Q8N0T1 100 aaPredicted RBP19.88■□□□□ 0.77
HDAC4-201ENST00000345617 CDC42EP4Q9H3Q1 356 aaKnown RBP19.88■□□□□ 0.77
HDAC4-201ENST00000345617 CHRM3P20309 590 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 ACAD10Q6JQN1 1059 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 MYO1HQ8N1T3 1032 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 MAGEB10Q96LZ2 347 aaPredicted RBP19.88■□□□□ 0.77
HDAC4-201ENST00000345617 CPNE1Q99829 537 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 SLC25A23Q9BV35 468 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 PRDM16Q9HAZ2 1276 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 NEDD8Q15843 81 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 MARK2Q7KZI7 788 aaKnown RBP19.88■□□□□ 0.77
HDAC4-201ENST00000345617 CHSY1Q86X52 802 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 ADPRHL2Q9NX46 363 aa19.88■□□□□ 0.77
HDAC4-201ENST00000345617 CPB1P15086 417 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 GEMP55040 296 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 SLC45A4Q5BKX6 768 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 MYLPFQ96A32 169 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 TMA7Q9Y2S6 64 aaKnown RBP19.87■□□□□ 0.77
HDAC4-201ENST00000345617 SH3GLB1Q9Y371 365 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 IRAK3Q9Y616 596 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 ZNF467Q7Z7K2 595 aaPredicted RBP19.87■□□□□ 0.77
HDAC4-201ENST00000345617 STX12Q86Y82 276 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 C10orf53Q8N6V4 93 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 ZNF513Q8N8E2 541 aaPredicted RBP19.87■□□□□ 0.77
HDAC4-201ENST00000345617 GORASP1Q9BQQ3 440 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 PNPLA3Q9NST1 481 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 A0A1W2PRG6 482 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 BAIAP3O94812 1187 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 NR1D2Q14995 579 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 SLC25A24Q6NUK1 477 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 RAD9BQ6WBX8 426 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 CHCHD6Q9BRQ6 235 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 KATNAL1Q9BW62 490 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 PCDH9Q9HC56 1237 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 SKIV2L2P42285 1042 aaKnown RBP19.87■□□□□ 0.77
HDAC4-201ENST00000345617 POLD3Q15054 466 aaPredicted RBP19.87■□□□□ 0.77
HDAC4-201ENST00000345617 ZSWIM7Q19AV6 140 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 PRR23BQ6ZRT6 265 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 EEPD1Q7L9B9 569 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 ACTRT2Q8TDY3 377 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 CLPBQ9H078 707 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 ASB14A6NK59 587 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 F9P00740 461 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 CNPP09543 421 aaKnown RBP19.87■□□□□ 0.77
HDAC4-201ENST00000345617 STRA8Q7Z7C7 330 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 PPP1R16BQ96T49 567 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 KDM6BO15054 1643 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 SASH1O94885 1247 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 ATP6V1C1P21283 382 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 PCSK7Q16549 785 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 SMTNL2Q2TAL5 461 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 ERFEQ4G0M1 354 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 CLVS1Q8IUQ0 354 aaPredicted RBP19.87■□□□□ 0.77
HDAC4-201ENST00000345617 GRPEL2Q8TAA5 225 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 KCTD10Q9H3F6 313 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 VANGL2Q9ULK5 521 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 ACOT9Q9Y305 439 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 CLRN2A0PK11 232 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 FUT11Q495W5 492 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 EHD3Q9NZN3 535 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 E9PCH4 1651 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 ABCA6Q8N139 1617 aa19.87■□□□□ 0.77
HDAC4-201ENST00000345617 BCLAF3A2AJT9 711 aaKnown RBP19.86■□□□□ 0.77
HDAC4-201ENST00000345617 EURLQ9NYK6 297 aa19.86■□□□□ 0.77
HDAC4-201ENST00000345617 OVOS2A0A0G2JMS6 1433 aa19.86■□□□□ 0.77
HDAC4-201ENST00000345617 ARID1BQ8NFD5 2236 aaPredicted RBP19.86■□□□□ 0.77
HDAC4-201ENST00000345617 IRGMA1A4Y4 181 aa19.86■□□□□ 0.77
HDAC4-201ENST00000345617 TEX46H3BTG2 121 aa19.86■□□□□ 0.77
HDAC4-201ENST00000345617 TCF4P15884 667 aa19.86■□□□□ 0.77
HDAC4-201ENST00000345617 ACADLP28330 430 aa19.86■□□□□ 0.77
HDAC4-201ENST00000345617 ELOVL6Q9H5J4 265 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms