RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 DDHD2O94830 711 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 CYP1A2P05177 515 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 HIST1H2AGP0C0S8 130 aaPredicted RBP18.56■□□□□ 0.56
SMC4-201ENST00000344722 HIST1H2ADP20671 130 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 GCNT1Q02742 428 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 TRAF3Q13114 568 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 FOXR2Q6PJQ5 311 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 TRABD2AQ86V40 505 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 FLCNQ8NFG4 579 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 LNX1Q8TBB1 728 aaPredicted RBP18.56■□□□□ 0.56
SMC4-201ENST00000344722 NAT14Q8WUY8 206 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 HIST1H2AHQ96KK5 128 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 HIST1H2AJQ99878 128 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 H2AFJQ9BTM1 129 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.56■□□□□ 0.563e-18■■■■■ 78.4
SMC4-201ENST00000344722 LINC00854A0A1B0GVQ3 168 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 RHOBTB1O94844 696 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 NDUFA5Q16718 116 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 DCAF6Q58WW2 860 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 CYP2R1Q6VVX0 501 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 CHST12Q9NRB3 414 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 CEP170BQ9Y4F5 1589 aaPredicted RBP18.56■□□□□ 0.56
SMC4-201ENST00000344722 RTN3O95197 1032 aaPredicted RBP18.56■□□□□ 0.56
SMC4-201ENST00000344722 ATF7IP2Q5U623 682 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 NOP9Q86U38 636 aaKnown RBP18.56■□□□□ 0.56
SMC4-201ENST00000344722 VPS37AQ8NEZ2 397 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.56■□□□□ 0.562e-144■■■■■ 553.7
SMC4-201ENST00000344722 PKP3Q9Y446 797 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 FAM20BO75063 409 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 PKNOX1P55347 436 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 FITM2Q8N6M3 262 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 TMEM109Q9BVC6 243 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 TARS2Q9BW92 718 aaKnown RBP18.56■□□□□ 0.56
SMC4-201ENST00000344722 KIAA1257Q9ULG3 409 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 VWDEQ8N2E2 1590 aa18.56■□□□□ 0.56
SMC4-201ENST00000344722 SETD1BQ9UPS6 1966 aaKnown RBP18.56■□□□□ 0.56
SMC4-201ENST00000344722 INPP4BO15327 924 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 VDRP11473 427 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 KRT20P35900 424 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 TOP3AQ13472 1001 aaPredicted RBP18.55■□□□□ 0.56
SMC4-201ENST00000344722 ACAP1Q15027 740 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 TWF2Q6IBS0 349 aaKnown RBP18.55■□□□□ 0.56
SMC4-201ENST00000344722 ECHDC2Q86YB7 292 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 SPATA33Q96N06 139 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 APOL4Q9BPW4 351 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 RMND5AQ9H871 391 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 KLHL3Q9UH77 587 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 GRIN2DO15399 1336 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 C15orf38-AP3S2A0A0A6YYH1 394 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 ECE2O60344 883 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 TTLL4Q14679 1199 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 OTUD3Q5T2D3 398 aaPredicted RBP18.55■□□□□ 0.56
SMC4-201ENST00000344722 SV2AQ7L0J3 742 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 ARPINQ7Z6K5 226 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 C19orf18Q8NEA5 215 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 SLC7A14Q8TBB6 771 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 DCPSQ96C86 337 aaKnown RBP18.55■□□□□ 0.56
SMC4-201ENST00000344722 TLCD1Q96CP7 247 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 DEPDC7Q96QD5 511 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 CYP4F12Q9HCS2 524 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 CIDEBQ9UHD4 219 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 NDUFAF1Q9Y375 327 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 VIL1P09327 827 aaKnown RBP18.55■□□□□ 0.56
SMC4-201ENST00000344722 RGS4P49798 205 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 WASHC5Q12768 1159 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 CYP51A1Q16850 503 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 S100ZQ8WXG8 99 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 PPP1R10Q96QC0 940 aaKnown RBP18.55■□□□□ 0.56
SMC4-201ENST00000344722 SEPHS2Q99611 448 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 SLC8A2Q9UPR5 921 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 ALOX5P09917 674 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 FGFR2P21802 821 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 ACAT1P24752 427 aaKnown RBP18.55■□□□□ 0.56
SMC4-201ENST00000344722 BFSP2Q13515 415 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 SPANXN3Q5MJ09 141 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 XRRA1Q6P2D8 792 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.55■□□□□ 0.561e-6■■■■■ 406.9
SMC4-201ENST00000344722 SPON2Q9BUD6 331 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 FHDC1Q9C0D6 1143 aaPredicted RBP18.55■□□□□ 0.56
SMC4-201ENST00000344722 ARL8BQ9NVJ2 186 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.55■□□□□ 0.56
SMC4-201ENST00000344722 C5orf60A6NFR6 353 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 TSC22D2O75157 780 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 MAP3K6O95382 1288 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 ALOX12P18054 663 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 PURAQ00577 322 aaKnown RBP18.55■□□□□ 0.56
SMC4-201ENST00000344722 LPIN1Q14693 890 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 KCNV1Q6PIU1 500 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 FAM172AQ8WUF8 416 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 PLEKHA8Q96JA3 519 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 VPS9D1Q9Y2B5 631 aa18.55■□□□□ 0.56
SMC4-201ENST00000344722 RAD51Q06609 339 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 DPYSL3Q14195 570 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 SPANXN2Q5MJ10 180 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 ABRAXAS1Q6UWZ7 409 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 CLNKQ7Z7G1 428 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 EID3Q8N140 333 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 SLC10A4Q96EP9 437 aa18.54■□□□□ 0.56
SMC4-201ENST00000344722 CLK4Q9HAZ1 481 aaKnown RBP18.54■□□□□ 0.56
SMC4-201ENST00000344722 VTA1Q9NP79 307 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms