RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 ADAM32Q8TC27 787 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 SYT15Q9BQS2 421 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 SNRNP25Q9BV90 132 aaKnown RBP7.4□□□□□ -1.22
VCAN-202ENST00000342785 PDP2Q9P2J9 529 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 A0A096LPK6 155 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 ZBBXA8MT70 800 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 TRDMT1O14717 391 aaKnown RBP7.4□□□□□ -1.22
VCAN-202ENST00000342785 IRF6O14896 467 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 LGALS2P05162 132 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 RECQLP46063 649 aaPredicted RBP7.4□□□□□ -1.22
VCAN-202ENST00000342785 HADHBP55084 474 aaKnown RBP7.4□□□□□ -1.22
VCAN-202ENST00000342785 C16orf46Q6P387 395 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 IZUMO2Q6UXV1 221 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 PLEKHH3Q7Z736 793 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 NT5DC4Q86YG4 428 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 NUP93Q8N1F7 819 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 VANGL2Q9ULK5 521 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 AAR2Q9Y312 384 aaKnown RBP7.4□□□□□ -1.22
VCAN-202ENST00000342785 FOXO6A8MYZ6 492 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 NCAM2O15394 837 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 ENTPD5O75356 428 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 SEC24DO94855 1032 aaPredicted RBP7.4□□□□□ -1.22
VCAN-202ENST00000342785 CREB1P16220 341 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 AVPR1AP37288 418 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 MAPRE1Q15691 268 aaKnown RBP7.4□□□□□ -1.22
VCAN-202ENST00000342785 HSDL1Q3SXM5 330 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 PREPLQ4J6C6 727 aaPredicted RBP7.4□□□□□ -1.22
VCAN-202ENST00000342785 ZBTB41Q5SVQ8 909 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 RNF43Q68DV7 783 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 DEFB107AQ8IZN7 70 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 RPRD1AQ96P16 312 aaPredicted RBP7.4□□□□□ -1.22
VCAN-202ENST00000342785 PPP1R2P1Q96PQ5 205 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 MTFR1LQ9H019 292 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 TCF7L2Q9NQB0 619 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 ABI2Q9NYB9 513 aaPredicted RBP7.4□□□□□ -1.22
VCAN-202ENST00000342785 HES2Q9Y543 173 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 KCPQ6ZWJ8 1503 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 SNED1Q8TER0 1413 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 TRPC5OSA6NMA1 111 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 HADHAP40939 763 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 PTGIRP43119 386 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 SLC34A1Q06495 639 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 MMRN1Q13201 1228 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 VGLL4Q14135 290 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 INPP5AQ14642 412 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 KPNB1Q14974 876 aaKnown RBP7.4□□□□□ -1.22
VCAN-202ENST00000342785 RNF168Q8IYW5 571 aaPredicted RBP7.4□□□□□ -1.22
VCAN-202ENST00000342785 L3MBTL3Q96JM7 780 aaPredicted RBP7.4□□□□□ -1.22
VCAN-202ENST00000342785 ZNF512Q96ME7 567 aaPredicted RBP7.4□□□□□ -1.22
VCAN-202ENST00000342785 TSPYL2Q9H2G4 693 aaPredicted RBP7.4□□□□□ -1.22
VCAN-202ENST00000342785 IL1RL2Q9HB29 575 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 CYP4F12Q9HCS2 524 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 ETNK2Q9NVF9 386 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 RUVBL2Q9Y230 463 aaKnown RBP7.4□□□□□ -1.22
VCAN-202ENST00000342785 FAM237BA0A1B0GVD1 139 aa7.4□□□□□ -1.23
VCAN-202ENST00000342785 C17orf102A2RUQ5 167 aa7.4□□□□□ -1.23
VCAN-202ENST00000342785 DNM1LO00429 736 aa7.4□□□□□ -1.23
VCAN-202ENST00000342785 FKBP6O75344 327 aa7.4□□□□□ -1.23
VCAN-202ENST00000342785 HUNKP57058 714 aa7.4□□□□□ -1.23
VCAN-202ENST00000342785 IL31Q6EBC2 164 aa7.4□□□□□ -1.23
VCAN-202ENST00000342785 NKD2Q969F2 451 aaPredicted RBP7.4□□□□□ -1.23
VCAN-202ENST00000342785 NCKIPSDQ9NZQ3 722 aa7.4□□□□□ -1.23
VCAN-202ENST00000342785 HACD3Q9P035 362 aa7.4□□□□□ -1.23
VCAN-202ENST00000342785 SLC30A1Q9Y6M5 507 aa7.4□□□□□ -1.23
VCAN-202ENST00000342785 MROH7Q68CQ1 1323 aa7.4□□□□□ -1.23
VCAN-202ENST00000342785 SRP72O76094 671 aaKnown RBP7.4□□□□□ -1.23
VCAN-202ENST00000342785 THP07101 528 aa7.4□□□□□ -1.23
VCAN-202ENST00000342785 ATP6V1B1P15313 513 aa7.4□□□□□ -1.23
VCAN-202ENST00000342785 ABCG1P45844 678 aa7.4□□□□□ -1.23
VCAN-202ENST00000342785 NR2C2P49116 596 aa7.4□□□□□ -1.23
VCAN-202ENST00000342785 ABCE1P61221 599 aaKnown RBP7.4□□□□□ -1.23
VCAN-202ENST00000342785 CDH17Q12864 832 aa7.4□□□□□ -1.23
VCAN-202ENST00000342785 CELF3Q5SZQ8 465 aaKnown RBP7.4□□□□□ -1.23
VCAN-202ENST00000342785 SWT1Q5T5J6 900 aaKnown RBP7.4□□□□□ -1.23
VCAN-202ENST00000342785 CLEC4DQ8WXI8 215 aa7.4□□□□□ -1.23
VCAN-202ENST00000342785 ANKRD27Q96NW4 1050 aa7.4□□□□□ -1.23
VCAN-202ENST00000342785 NTPCRQ9BSD7 190 aaKnown RBP7.4□□□□□ -1.23
VCAN-202ENST00000342785 RBM22Q9NW64 420 aaKnown RBP eCLIP7.4□□□□□ -1.23
VCAN-202ENST00000342785 STXBP5LQ9Y2K9 1186 aa7.4□□□□□ -1.23
VCAN-202ENST00000342785 LRCH1Q9Y2L9 728 aa7.4□□□□□ -1.23
VCAN-202ENST00000342785 ADM5C9JUS6 153 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 DNAJC6O75061 913 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 MT-CO1P00395 513 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 PYGLP06737 847 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 EEF1DP29692 281 aaKnown RBP7.39□□□□□ -1.23
VCAN-202ENST00000342785 ADCYAP1R1P41586 468 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 OR1G1P47890 313 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 DSG1Q02413 1049 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 ARHGEF6Q15052 776 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 GJC2Q5T442 439 aaPredicted RBP7.39□□□□□ -1.23
VCAN-202ENST00000342785 AGAP9Q5VTM2 703 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 CXorf38Q8TB03 319 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 SH3GL3Q99963 347 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 CCDC90BQ9GZT6 254 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 LATS2Q9NRM7 1088 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 DDX43Q9NXZ2 648 aaKnown RBP7.39□□□□□ -1.23
VCAN-202ENST00000342785 TCRBV9S1A1TA0A576 114 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 F8W8V4 182 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 CHADO15335 359 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 RECQL4O94761 1208 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms