RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 OAZ2O95190 189 aa20.75■□□□□ 0.91
RTN1-202ENST00000342503 MAP3K6O95382 1288 aa20.75■□□□□ 0.91
RTN1-202ENST00000342503 NR1D1P20393 614 aa20.75■□□□□ 0.91
RTN1-202ENST00000342503 AMPD1P23109 780 aa20.75■□□□□ 0.91
RTN1-202ENST00000342503 ARL4AP40617 200 aa20.75■□□□□ 0.91
RTN1-202ENST00000342503 SKOR1P84550 965 aa20.75■□□□□ 0.91
RTN1-202ENST00000342503 SLC39A12Q504Y0 691 aa20.75■□□□□ 0.91
RTN1-202ENST00000342503 KDM7AQ6ZMT4 941 aa20.75■□□□□ 0.91
RTN1-202ENST00000342503 ZNF771Q7L3S4 317 aaPredicted RBP20.75■□□□□ 0.91
RTN1-202ENST00000342503 PPIL6Q8IXY8 311 aa20.75■□□□□ 0.91
RTN1-202ENST00000342503 SCML4Q8N228 414 aa20.75■□□□□ 0.91
RTN1-202ENST00000342503 TAB3Q8N5C8 712 aaPredicted RBP20.75■□□□□ 0.91
RTN1-202ENST00000342503 CPT1BQ92523 772 aa20.75■□□□□ 0.91
RTN1-202ENST00000342503 EDEM1Q92611 657 aa20.75■□□□□ 0.91
RTN1-202ENST00000342503 BEGAINQ9BUH8 593 aa20.75■□□□□ 0.91
RTN1-202ENST00000342503 ZCWPW1Q9H0M4 648 aa20.75■□□□□ 0.91
RTN1-202ENST00000342503 PNPLA8Q9NP80 782 aa20.75■□□□□ 0.91
RTN1-202ENST00000342503 SAYSD1Q9NPB0 183 aa20.75■□□□□ 0.91
RTN1-202ENST00000342503 RCOR3Q9P2K3 495 aaPredicted RBP20.75■□□□□ 0.91
RTN1-202ENST00000342503 TLDC2A0PJX2 215 aa20.75■□□□□ 0.91
RTN1-202ENST00000342503 MAGEA4P43358 317 aa20.75■□□□□ 0.91
RTN1-202ENST00000342503 ATP1A2P50993 1020 aa20.75■□□□□ 0.91
RTN1-202ENST00000342503 GBE1Q04446 702 aa20.75■□□□□ 0.91
RTN1-202ENST00000342503 SLC10A2Q12908 348 aaPredicted RBP20.75■□□□□ 0.91
RTN1-202ENST00000342503 ANKRD22Q5VYY1 191 aa20.75■□□□□ 0.91
RTN1-202ENST00000342503 EPS8L3Q8TE67 593 aaKnown RBP20.75■□□□□ 0.91
RTN1-202ENST00000342503 PKNOX2Q96KN3 472 aa20.75■□□□□ 0.91
RTN1-202ENST00000342503 C9orf72Q96LT7 481 aa20.75■□□□□ 0.91
RTN1-202ENST00000342503 WDR6Q9NNW5 1121 aaKnown RBP20.75■□□□□ 0.91
RTN1-202ENST00000342503 ETNK2Q9NVF9 386 aa20.75■□□□□ 0.91
RTN1-202ENST00000342503 TTC3P53804 2025 aa20.75■□□□□ 0.91
RTN1-202ENST00000342503 MYO16Q9Y6X6 1858 aa20.74■□□□□ 0.91
RTN1-202ENST00000342503 BCLAF3A2AJT9 711 aaKnown RBP20.74■□□□□ 0.91
RTN1-202ENST00000342503 SMIM23A6NLE4 172 aa20.74■□□□□ 0.91
RTN1-202ENST00000342503 KCNN4O15554 427 aa20.74■□□□□ 0.91
RTN1-202ENST00000342503 RBL1P28749 1068 aa20.74■□□□□ 0.91
RTN1-202ENST00000342503 GRIK1P39086 918 aa20.74■□□□□ 0.91
RTN1-202ENST00000342503 EFHC2Q5JST6 749 aa20.74■□□□□ 0.91
RTN1-202ENST00000342503 EMC10Q5UCC4 262 aa20.74■□□□□ 0.91
RTN1-202ENST00000342503 NCBP2-AS2Q69YL0 99 aa20.74■□□□□ 0.91
RTN1-202ENST00000342503 SLC39A5Q6ZMH5 540 aa20.74■□□□□ 0.91
RTN1-202ENST00000342503 DCP1BQ8IZD4 617 aaKnown RBP20.74■□□□□ 0.91
RTN1-202ENST00000342503 NAT8LQ8N9F0 302 aa20.74■□□□□ 0.91
RTN1-202ENST00000342503 SCAMP5Q8TAC9 235 aa20.74■□□□□ 0.91
RTN1-202ENST00000342503 LRRN4Q8WUT4 740 aa20.74■□□□□ 0.91
RTN1-202ENST00000342503 PGAP3Q96FM1 320 aaPredicted RBP20.74■□□□□ 0.91
RTN1-202ENST00000342503 SLC9A7Q96T83 725 aa20.74■□□□□ 0.91
RTN1-202ENST00000342503 RRN3Q9NYV6 651 aa20.74■□□□□ 0.91
RTN1-202ENST00000342503 MFHAS1Q9Y4C4 1052 aa20.74■□□□□ 0.91
RTN1-202ENST00000342503 FNDC1Q4ZHG4 1894 aaPredicted RBP20.74■□□□□ 0.91
RTN1-202ENST00000342503 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.73■□□□□ 0.91
RTN1-202ENST00000342503 CFAP69A5D8W1 941 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 H3BRJ5 948 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 CAPN2P17655 700 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 ADRA1BP35368 520 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 CCL23P55773 120 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 DMTNQ08495 405 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 VARS2Q5ST30 1063 aaKnown RBP20.73■□□□□ 0.91
RTN1-202ENST00000342503 C6orf118Q5T5N4 469 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 BSPRYQ5W0U4 402 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 CROCCP2Q86T23 111 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 CDKL3Q8IVW4 592 aaPredicted RBP20.73■□□□□ 0.91
RTN1-202ENST00000342503 RNF139Q8WU17 664 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 NTAN1Q96AB6 310 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 TLCD1Q96CP7 247 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 RTP4Q96DX8 246 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 HIPK3Q9H422 1215 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 ANLNQ9NQW6 1124 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 DDIT4Q9NX09 232 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 ADAM28Q9UKQ2 775 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 DCDC2CA8MYV0 355 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 GOLGA8MH3BSY2 632 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 RASGRF2O14827 1237 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 SYN3O14994 580 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 HPDP32754 393 aaPredicted RBP20.73■□□□□ 0.91
RTN1-202ENST00000342503 NR2C2P49116 596 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 AIF1P55008 147 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 MAGOHP61326 146 aaKnown RBP20.73■□□□□ 0.91
RTN1-202ENST00000342503 GAD2Q05329 585 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 XRCC4Q13426 336 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 FAM182AQ5T1J6 154 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 ANKRD33Q7Z3H0 272 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 NPAS4Q8IUM7 802 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 PGM2Q96G03 612 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 COLEC11Q9BWP8 271 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 CAPS2Q9BXY5 557 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 ROPN1BQ9BZX4 212 aaPredicted RBP20.73■□□□□ 0.91
RTN1-202ENST00000342503 ROPN1Q9HAT0 212 aaPredicted RBP20.73■□□□□ 0.91
RTN1-202ENST00000342503 ARHGEF4Q9NR80 690 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 ABI2Q9NYB9 513 aaPredicted RBP20.73■□□□□ 0.91
RTN1-202ENST00000342503 HCSTQ9UBK5 93 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 FBXW11Q9UKB1 542 aa20.73■□□□□ 0.91
RTN1-202ENST00000342503 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.72■□□□□ 0.91
RTN1-202ENST00000342503 TCRBV7S3A2A0A539 114 aa20.72■□□□□ 0.91
RTN1-202ENST00000342503 TNFRSF10BO14763 440 aa20.72■□□□□ 0.91
RTN1-202ENST00000342503 CREB3O43889 395 aa20.72■□□□□ 0.91
RTN1-202ENST00000342503 SHOX2O60902 331 aaPredicted RBP20.72■□□□□ 0.91
RTN1-202ENST00000342503 CXCL10P02778 98 aa20.72■□□□□ 0.91
RTN1-202ENST00000342503 SLCO1A2P46721 670 aa20.72■□□□□ 0.91
RTN1-202ENST00000342503 SLC11A1P49279 550 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms