RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 TRIM64BA6NI03 449 aa19.11■□□□□ 0.65
SMPD1-201ENST00000342245 GIPC1O14908 333 aa19.11■□□□□ 0.65
SMPD1-201ENST00000342245 PPP1R11O60927 126 aaPredicted RBP19.11■□□□□ 0.65
SMPD1-201ENST00000342245 ZNF26P17031 533 aaPredicted RBP19.11■□□□□ 0.65
SMPD1-201ENST00000342245 TRPC1P48995 793 aa19.11■□□□□ 0.65
SMPD1-201ENST00000342245 MRPS22P82650 360 aaKnown RBP19.11■□□□□ 0.65
SMPD1-201ENST00000342245 NR1D2Q14995 579 aa19.11■□□□□ 0.65
SMPD1-201ENST00000342245 PRR16Q569H4 304 aa19.11■□□□□ 0.65
SMPD1-201ENST00000342245 ODR4Q5SWX8 454 aa19.11■□□□□ 0.65
SMPD1-201ENST00000342245 CES4AQ5XG92 561 aa19.11■□□□□ 0.65
SMPD1-201ENST00000342245 SPOCD1Q6ZMY3 1216 aa19.11■□□□□ 0.65
SMPD1-201ENST00000342245 EEPD1Q7L9B9 569 aa19.11■□□□□ 0.65
SMPD1-201ENST00000342245 TPH2Q8IWU9 490 aa19.11■□□□□ 0.65
SMPD1-201ENST00000342245 TNIP2Q8NFZ5 429 aa19.11■□□□□ 0.65
SMPD1-201ENST00000342245 DCUN1D5Q9BTE7 237 aa19.11■□□□□ 0.65
SMPD1-201ENST00000342245 MRPL46Q9H2W6 279 aaKnown RBP19.11■□□□□ 0.65
SMPD1-201ENST00000342245 CARD8Q9Y2G2 431 aa19.11■□□□□ 0.65
SMPD1-201ENST00000342245 DNAJC16Q9Y2G8 782 aa19.11■□□□□ 0.65
SMPD1-201ENST00000342245 SNAP91O60641 907 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 DGKIO75912 1065 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 KRT1P04264 644 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 LDHCP07864 332 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 DCKP27707 260 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 GPC3P51654 580 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 TRIM16LQ309B1 348 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 ANKRD22Q5VYY1 191 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 OGFOD2Q6N063 350 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 TRIM72Q6ZMU5 477 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 XXYLT1Q8NBI6 393 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 PDPRQ8NCN5 879 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 HELQQ8TDG4 1101 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 TGFBRAP1Q8WUH2 860 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 TMEM121Q9BTD3 319 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 C1orf50Q9BV19 199 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 BCAS3Q9H6U6 928 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 ZNF395Q9H8N7 513 aaPredicted RBP19.1■□□□□ 0.65
SMPD1-201ENST00000342245 CD209Q9NNX6 404 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 OLAHQ9NV23 265 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 DDX56Q9NY93 547 aaKnown RBP19.1■□□□□ 0.65
SMPD1-201ENST00000342245 XPO7Q9UIA9 1087 aaKnown RBP19.1■□□□□ 0.65
SMPD1-201ENST00000342245 MINPP1Q9UNW1 487 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 TIMM22Q9Y584 194 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 FAM155AB1AL88 458 aaPredicted RBP19.1■□□□□ 0.65
SMPD1-201ENST00000342245 TRDMT1O14717 391 aaKnown RBP19.1■□□□□ 0.65
SMPD1-201ENST00000342245 ALOX5P09917 674 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 KRT10P13645 584 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 HOXD11P31277 338 aaPredicted RBP19.1■□□□□ 0.65
SMPD1-201ENST00000342245 IDH3AP50213 366 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 NLRP11P59045 1033 aaKnown RBP19.1■□□□□ 0.65
SMPD1-201ENST00000342245 ZNF543Q08ER8 600 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 TFDP3Q5H9I0 405 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 C1orf220Q5T0J3 134 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 TMEM102Q8N9M5 508 aaPredicted RBP19.1■□□□□ 0.65
SMPD1-201ENST00000342245 CRYGNQ8WXF5 182 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 PKP2Q99959 881 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 C20orf27Q9GZN8 174 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 KLHL3Q9UH77 587 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 ERVK-11Q9UQG0 969 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 COQ4Q9Y3A0 265 aa19.1■□□□□ 0.65
SMPD1-201ENST00000342245 P4HBP07237 508 aaKnown RBP19.09■□□□□ 0.65
SMPD1-201ENST00000342245 HNRNPFP52597 415 aaKnown RBP19.09■□□□□ 0.65
SMPD1-201ENST00000342245 ZYXQ15942 572 aaKnown RBP19.09■□□□□ 0.65
SMPD1-201ENST00000342245 GPATCH4Q5T3I0 446 aaKnown RBP19.09■□□□□ 0.65
SMPD1-201ENST00000342245 ZFYVE27Q5T4F4 411 aa19.09■□□□□ 0.65
SMPD1-201ENST00000342245 C16orf46Q6P387 395 aa19.09■□□□□ 0.65
SMPD1-201ENST00000342245 BNC2Q6ZN30 1099 aaPredicted RBP19.09■□□□□ 0.65
SMPD1-201ENST00000342245 MON1BQ7L1V2 547 aa19.09■□□□□ 0.65
SMPD1-201ENST00000342245 LILRA2Q8N149 483 aa19.09■□□□□ 0.65
SMPD1-201ENST00000342245 UIMC1Q96RL1 719 aa19.09■□□□□ 0.65
SMPD1-201ENST00000342245 TMEM79Q9BSE2 394 aa19.09■□□□□ 0.65
SMPD1-201ENST00000342245 ANKRD60Q9BZ19 345 aa19.09■□□□□ 0.65
SMPD1-201ENST00000342245 RPF2Q9H7B2 306 aaKnown RBP19.09■□□□□ 0.65
SMPD1-201ENST00000342245 VAV3Q9UKW4 847 aa19.09■□□□□ 0.65
SMPD1-201ENST00000342245 DDX60LQ5H9U9 1706 aaKnown RBP19.09■□□□□ 0.65
SMPD1-201ENST00000342245 KDM4FA0A1W2PPD8 638 aa19.09■□□□□ 0.65
SMPD1-201ENST00000342245 GNPATO15228 680 aa19.09■□□□□ 0.65
SMPD1-201ENST00000342245 NOL3O60936 208 aaKnown RBP19.09■□□□□ 0.65
SMPD1-201ENST00000342245 PIAS1O75925 651 aa19.09■□□□□ 0.65
SMPD1-201ENST00000342245 MAPTP10636 758 aaKnown RBP19.09■□□□□ 0.65
SMPD1-201ENST00000342245 EIF2AK2P19525 551 aaKnown RBP19.09■□□□□ 0.65
SMPD1-201ENST00000342245 GJC1P36383 396 aa19.09■□□□□ 0.65
SMPD1-201ENST00000342245 MFSD7Q6UXD7 560 aa19.09■□□□□ 0.65
SMPD1-201ENST00000342245 PDCD6IPQ8WUM4 868 aaKnown RBP19.09■□□□□ 0.65
SMPD1-201ENST00000342245 DHX38Q92620 1227 aaKnown RBP19.09■□□□□ 0.65
SMPD1-201ENST00000342245 CNDP2Q96KP4 475 aaKnown RBP19.09■□□□□ 0.65
SMPD1-201ENST00000342245 FRMD8Q9BZ67 464 aaPredicted RBP19.09■□□□□ 0.65
SMPD1-201ENST00000342245 HOMER2Q9NSB8 354 aa19.09■□□□□ 0.65
SMPD1-201ENST00000342245 USTQ9Y2C2 406 aa19.09■□□□□ 0.65
SMPD1-201ENST00000342245 COL16A1Q07092 1604 aaPredicted RBP19.08■□□□□ 0.65
SMPD1-201ENST00000342245 hCG_1818297A0A087WSY0 165 aa19.08■□□□□ 0.65
SMPD1-201ENST00000342245 RFPL1O75677 317 aa19.08■□□□□ 0.65
SMPD1-201ENST00000342245 GRK2P25098 689 aa19.08■□□□□ 0.65
SMPD1-201ENST00000342245 ELK3P41970 407 aa19.08■□□□□ 0.65
SMPD1-201ENST00000342245 SLC1A6P48664 564 aa19.08■□□□□ 0.65
SMPD1-201ENST00000342245 MGAT5BQ3V5L5 792 aa19.08■□□□□ 0.65
SMPD1-201ENST00000342245 UBR7Q8N806 425 aa19.08■□□□□ 0.65
SMPD1-201ENST00000342245 TAMM41Q96BW9 452 aa19.08■□□□□ 0.65
SMPD1-201ENST00000342245 ZNF512Q96ME7 567 aaPredicted RBP19.08■□□□□ 0.65
SMPD1-201ENST00000342245 SENP7Q9BQF6 1050 aa19.08■□□□□ 0.65
SMPD1-201ENST00000342245 BCAS2O75934 225 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms