RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 TUBGCP4Q9UGJ1 667 aa7.54□□□□□ -1.2
PTPRR-202ENST00000342084 PLLPQ9Y342 182 aa7.54□□□□□ -1.2
PTPRR-202ENST00000342084 HES2Q9Y543 173 aa7.54□□□□□ -1.2
PTPRR-202ENST00000342084 LRRC42Q9Y546 428 aa7.54□□□□□ -1.2
PTPRR-202ENST00000342084 SNX9Q9Y5X1 595 aa7.54□□□□□ -1.2
PTPRR-202ENST00000342084 PTPRFP10586 1907 aa7.54□□□□□ -1.2
PTPRR-202ENST00000342084 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.53□□□□□ -1.2
PTPRR-202ENST00000342084 WDR27A2RRH5 827 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 SPDYE5A6NIY4 337 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 B2RBV5 119 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 I3L4J1 428 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 CAPN9O14815 690 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 NVLO15381 856 aaKnown RBP7.53□□□□□ -1.2
PTPRR-202ENST00000342084 ITM2AO43736 263 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 GAS2O43903 313 aaKnown RBP7.53□□□□□ -1.2
PTPRR-202ENST00000342084 HBP1O60381 514 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 DNAJC6O75061 913 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 TBX10O75333 385 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 KRT37O76014 449 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 APOEP02649 317 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 PDGFRBP09619 1106 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 MCF2P10911 925 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 LCP1P13796 627 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 CCDC130P13994 396 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 VAV1P15498 845 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 TSHRP16473 764 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 ADORA2BP29275 332 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 SDC4P31431 198 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 PGM1P36871 562 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 CCNHP51946 323 aaPredicted RBP7.53□□□□□ -1.2
PTPRR-202ENST00000342084 OLIG2Q13516 323 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 SLC9A4Q6AI14 798 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 CAPRIN2Q6IMN6 1127 aaKnown RBP7.53□□□□□ -1.2
PTPRR-202ENST00000342084 CES3Q6UWW8 571 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 EP400NLQ6ZTU2 488 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 NUDCD3Q8IVD9 361 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 SLC25A41Q8N5S1 370 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 TEX9Q8N6V9 391 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 CCDC185Q8N715 623 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 FBXO41Q8TF61 875 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 DEPDC1BQ8WUY9 529 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 DNAJC9Q8WXX5 260 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 C18orf25Q96B23 403 aaPredicted RBP7.53□□□□□ -1.2
PTPRR-202ENST00000342084 SIGLEC10Q96LC7 697 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 FAM161BQ96MY7 647 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 ZMAT2Q96NC0 199 aaKnown RBP7.53□□□□□ -1.2
PTPRR-202ENST00000342084 KCTD15Q96SI1 283 aaPredicted RBP7.53□□□□□ -1.2
PTPRR-202ENST00000342084 YIPF3Q9GZM5 350 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 SMARCAD1Q9H4L7 1026 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 NRDE2Q9H7Z3 1164 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 CYP3A43Q9HB55 503 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 PNPLA8Q9NP80 782 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 BATF3Q9NR55 127 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 RBPJLQ9UBG7 517 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 GJD2Q9UKL4 321 aa7.53□□□□□ -1.2
PTPRR-202ENST00000342084 POLR2AP24928 1970 aaKnown RBP7.53□□□□□ -1.2
PTPRR-202ENST00000342084 SYNJ2BP-COX16A0A087WUM0 186 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 BCLAF3A2AJT9 711 aaKnown RBP7.52□□□□□ -1.2
PTPRR-202ENST00000342084 DPPA5A6NC42 116 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 SMAPO00193 183 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 KIF1CO43896 1103 aaKnown RBP7.52□□□□□ -1.2
PTPRR-202ENST00000342084 TSPAN1O60635 241 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 TGDSO95455 350 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 PSMG1O95456 288 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 NPTXRO95502 500 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 RARBP10826 455 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 P4HA1P13674 534 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 ATP6V1C1P21283 382 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 TGM2P21980 687 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 PRKCHP24723 683 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 ATICP31939 592 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 L1CAMP32004 1257 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 CCNFP41002 786 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 RPL10AP62906 217 aaKnown RBP7.52□□□□□ -1.2
PTPRR-202ENST00000342084 OCRLQ01968 901 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 INCA1Q0VD86 236 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 KCTD2Q14681 263 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 ACAP1Q15027 740 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 SOWAHAQ2M3V2 549 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 SPDYAQ5MJ70 313 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 SNX30Q5VWJ9 437 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 CASC4Q6P4E1 433 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 KCNT2Q6UVM3 1135 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 ATG14Q6ZNE5 492 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 MAP7D3Q8IWC1 876 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 KBTBD2Q8IY47 623 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 ADGRF2Q8IZF7 708 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.52□□□□□ -1.2
PTPRR-202ENST00000342084 PDCD7Q8N8D1 485 aaKnown RBP7.52□□□□□ -1.2
PTPRR-202ENST00000342084 RBM15BQ8NDT2 890 aaKnown RBP7.52□□□□□ -1.2
PTPRR-202ENST00000342084 RTP4Q96DX8 246 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 ZNF333Q96JL9 665 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 RILPQ96NA2 401 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 LGMNQ99538 433 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 APOL6Q9BWW8 343 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 SHCBP1LQ9BZQ2 653 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 DCLRE1BQ9H816 532 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.52□□□□□ -1.2
PTPRR-202ENST00000342084 SNTG2Q9NY99 539 aa7.52□□□□□ -1.2
PTPRR-202ENST00000342084 COX16Q9P0S2 106 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms