RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 NEDD8-MDP1E9PL57 170 aa13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 LRP3O75074 770 aa13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 LATS1O95835 1130 aa13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 MBD3O95983 291 aa13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 TYRP14679 529 aa13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 EEF1GP26641 437 aaKnown RBP13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 PON1P27169 355 aa13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 GNA15P30679 374 aa13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 CORO1AP31146 461 aaKnown RBP13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 SLC6A11P48066 632 aa13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 RPL34P49207 117 aaKnown RBP13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 HARS2P49590 506 aaKnown RBP13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 FOXK1P85037 733 aa13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 KDSRQ06136 332 aa13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 DMWDQ09019 674 aa13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 E2F5Q15329 346 aa13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 VWA3BQ502W6 1294 aa13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 EOGTQ5NDL2 527 aa13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 HEATR6Q6AI08 1181 aaKnown RBP13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 GRAMD4Q6IC98 578 aa13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 PMF1Q6P1K2 205 aa13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 C11orf74Q86VG3 221 aa13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 GAB3Q8WWW8 586 aa13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 WBP2Q969T9 261 aa13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 ZSWIM1Q9BR11 485 aa13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 TUBGCP2Q9BSJ2 902 aa13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 CRACR2AQ9BSW2 395 aa13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 NDST4Q9H3R1 872 aa13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 STARD13Q9Y3M8 1113 aa13.95□□□□□ -0.18
SIRPB3P-201ENST00000340424 SLC12A8A0AV02 714 aa13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 C2orf72A6NCS6 295 aa13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 YJEFN3A6XGL0 299 aa13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 E7ENQ6 273 aa13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 AXIN1O15169 862 aa13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 HRO43593 1189 aa13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 FOXD2O60548 495 aaPredicted RBP13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 RPP40O75818 363 aaKnown RBP13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 ALDH1A2O94788 518 aa13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 CYBBP04839 570 aa13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 RETP07949 1114 aa13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 LCP1P13796 627 aa13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 SLC9A1P19634 815 aa13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 GPD2P43304 727 aa13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 KIR2DL1P43626 348 aaPredicted RBP13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 SEC13P55735 322 aa13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 TRIP4Q15650 581 aaPredicted RBP13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 C2orf27AQ580R0 203 aa13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 MSANTD2Q6P1R3 559 aa13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 PRR23BQ6ZRT6 265 aa13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 CEP68Q76N32 757 aa13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 BEND5Q7L4P6 421 aa13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 FMNL3Q8IVF7 1028 aa13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 FAM217AQ8IXS0 508 aa13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 CPXM2Q8N436 756 aa13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 TSTD1Q8NFU3 115 aa13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 ENOX1Q8TC92 643 aaKnown RBP13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 ZNF606Q8WXB4 792 aa13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 SHC3Q92529 594 aa13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 LOXL4Q96JB6 756 aa13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 IRX2Q9BZI1 471 aaPredicted RBP13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 DNAJC17Q9NVM6 304 aaKnown RBP13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 EP300Q09472 2414 aaPredicted RBP13.94□□□□□ -0.18
SIRPB3P-201ENST00000340424 KCNJ18B7U540 433 aa13.93□□□□□ -0.18
SIRPB3P-201ENST00000340424 PENKP01210 267 aaPredicted RBP13.93□□□□□ -0.18
SIRPB3P-201ENST00000340424 LTFP02788 710 aa13.93□□□□□ -0.18
SIRPB3P-201ENST00000340424 KLKB1P03952 638 aa13.93□□□□□ -0.18
SIRPB3P-201ENST00000340424 TPM2P07951 284 aa13.93□□□□□ -0.18
SIRPB3P-201ENST00000340424 RGS7P49802 495 aa13.93□□□□□ -0.18
SIRPB3P-201ENST00000340424 SNX16P57768 344 aa13.93□□□□□ -0.18
SIRPB3P-201ENST00000340424 PTK2Q05397 1052 aa13.93□□□□□ -0.18
SIRPB3P-201ENST00000340424 KCNJ12Q14500 433 aa13.93□□□□□ -0.18
SIRPB3P-201ENST00000340424 CRY1Q16526 586 aa13.93□□□□□ -0.18
SIRPB3P-201ENST00000340424 TCP11X2Q5H9J9 407 aa13.93□□□□□ -0.18
SIRPB3P-201ENST00000340424 C10orf76Q5T2E6 689 aa13.93□□□□□ -0.18
SIRPB3P-201ENST00000340424 TPGS1Q6ZTW0 290 aa13.93□□□□□ -0.18
SIRPB3P-201ENST00000340424 CACNA2D4Q7Z3S7 1137 aa13.93□□□□□ -0.18
SIRPB3P-201ENST00000340424 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.93□□□□□ -0.18
SIRPB3P-201ENST00000340424 NAT16Q8N8M0 369 aa13.93□□□□□ -0.18
SIRPB3P-201ENST00000340424 IL17RCQ8NAC3 791 aa13.93□□□□□ -0.18
SIRPB3P-201ENST00000340424 GPT2Q8TD30 523 aa13.93□□□□□ -0.18
SIRPB3P-201ENST00000340424 HHIPQ96QV1 700 aa13.93□□□□□ -0.18
SIRPB3P-201ENST00000340424 SLC2A11Q9BYW1 496 aa13.93□□□□□ -0.18
SIRPB3P-201ENST00000340424 POLMQ9NP87 494 aaPredicted RBP13.93□□□□□ -0.18
SIRPB3P-201ENST00000340424 STOML2Q9UJZ1 356 aa13.93□□□□□ -0.18
SIRPB3P-201ENST00000340424 FBXO10Q9UK96 956 aa13.93□□□□□ -0.18
SIRPB3P-201ENST00000340424 AGO1Q9UL18 857 aaKnown RBP13.93□□□□□ -0.18
SIRPB3P-201ENST00000340424 SLC27A6Q9Y2P4 619 aa13.93□□□□□ -0.18
SIRPB3P-201ENST00000340424 MYOFQ9NZM1 2061 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 NPC1O15118 1278 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 THAP12O43422 761 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 LETM1O95202 739 aaPredicted RBP13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 KLF8O95600 359 aaPredicted RBP13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 HMBSP08397 361 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 SDHBP21912 280 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 USP8P40818 1118 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 DGKGP49619 791 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 BPIFB4P59827 614 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 RING1Q06587 406 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 NNTQ13423 1086 aa13.92□□□□□ -0.18
SIRPB3P-201ENST00000340424 ARHGAP44Q17R89 818 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms