RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 OR8D1Q8WZ84 308 aa13.23□□□□□ -0.29
LIN54-201ENST00000340417 WNT8BQ93098 351 aa13.23□□□□□ -0.29
LIN54-201ENST00000340417 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.23□□□□□ -0.29
LIN54-201ENST00000340417 BCAP29Q9UHQ4 241 aa13.23□□□□□ -0.29
LIN54-201ENST00000340417 CYBAP13498 195 aa13.23□□□□□ -0.29
LIN54-201ENST00000340417 EN2P19622 333 aaPredicted RBP13.23□□□□□ -0.29
LIN54-201ENST00000340417 NFIL3Q16649 462 aa13.23□□□□□ -0.29
LIN54-201ENST00000340417 SNX27Q96L92 541 aa13.23□□□□□ -0.29
LIN54-201ENST00000340417 FICDQ9BVA6 458 aa13.23□□□□□ -0.29
LIN54-201ENST00000340417 GPR88Q9GZN0 384 aa13.23□□□□□ -0.29
LIN54-201ENST00000340417 CPSF2Q9P2I0 782 aaKnown RBP13.23□□□□□ -0.29
LIN54-201ENST00000340417 ZC3H7BQ9UGR2 993 aaKnown RBP13.23□□□□□ -0.29
LIN54-201ENST00000340417 NFU1Q9UMS0 254 aa13.23□□□□□ -0.29
LIN54-201ENST00000340417 A0A087X0B3 334 aa13.23□□□□□ -0.29
LIN54-201ENST00000340417 ZWINTO95229 277 aa13.23□□□□□ -0.29
LIN54-201ENST00000340417 WASP42768 502 aa13.23□□□□□ -0.29
LIN54-201ENST00000340417 SP2Q02086 613 aa13.23□□□□□ -0.29
LIN54-201ENST00000340417 PDCLQ13371 301 aa13.23□□□□□ -0.29
LIN54-201ENST00000340417 DHX34Q14147 1143 aaKnown RBP13.23□□□□□ -0.29
LIN54-201ENST00000340417 INTS6LQ5JSJ4 861 aaKnown RBP13.23□□□□□ -0.29
LIN54-201ENST00000340417 ATG16L1Q676U5 607 aa13.23□□□□□ -0.29
LIN54-201ENST00000340417 MRNIPQ6NTE8 343 aa13.23□□□□□ -0.29
LIN54-201ENST00000340417 INTS9Q9NV88 658 aaKnown RBP13.23□□□□□ -0.29
LIN54-201ENST00000340417 CACNA1FO60840 1977 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 H2AFYO75367 372 aaKnown RBP13.22□□□□□ -0.29
LIN54-201ENST00000340417 ANP32DO95626 131 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 HALP42357 657 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 TBCCQ15814 346 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 SLC35C1Q96A29 364 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 RMDN2Q96LZ7 410 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 NSMCE4AQ9NXX6 385 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 LNPEPQ9UIQ6 1025 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 ITM2BQ9Y287 266 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 ZNF862O60290 1169 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 TIMP1P01033 207 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 RABGGTBP53611 331 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 USP10Q14694 798 aaKnown RBP13.22□□□□□ -0.29
LIN54-201ENST00000340417 ARMC12Q5T9G4 340 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 SEPT3Q9UH03 358 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 A0A0B4J269 797 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 HMOX2P30519 316 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 PMS1P54277 932 aaKnown RBP13.22□□□□□ -0.29
LIN54-201ENST00000340417 PPP3CAQ08209 521 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 CBWD6Q4V339 395 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 GLE1Q53GS7 698 aaKnown RBP13.22□□□□□ -0.29
LIN54-201ENST00000340417 CBWD3Q5JTY5 395 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 CBWD5Q5RIA9 395 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 USP45Q70EL2 814 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 NT5DC3Q86UY8 548 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 CCDC3Q9BQI4 270 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 CLPBQ9H078 707 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 ABCG4Q9H172 646 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 TRIM45Q9H8W5 580 aaPredicted RBP13.22□□□□□ -0.29
LIN54-201ENST00000340417 IQCF3P0C7M6 154 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 COL6A1P12109 1028 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 KCNA5P22460 613 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 ATP1A2P50993 1020 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 MORN1Q5T089 497 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 ALS2CLQ60I27 953 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 TTC17Q96AE7 1141 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 MS4A4AQ96JQ5 239 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 DUSP16Q9BY84 665 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 POLMQ9NP87 494 aaPredicted RBP13.22□□□□□ -0.29
LIN54-201ENST00000340417 PKD2L2Q9NZM6 624 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 STRCP1A6NGW2 1772 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 AGRPO00253 132 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 SRP72O76094 671 aaKnown RBP13.22□□□□□ -0.29
LIN54-201ENST00000340417 MZF1P28698 734 aaPredicted RBP13.22□□□□□ -0.29
LIN54-201ENST00000340417 CENPCQ03188 943 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 MTF1Q14872 753 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 ECM1Q16610 540 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 MAN1C1Q9NR34 630 aa13.22□□□□□ -0.29
LIN54-201ENST00000340417 TRMT6Q9UJA5 497 aaKnown RBP13.22□□□□□ -0.29
LIN54-201ENST00000340417 TPX2Q9ULW0 747 aaKnown RBP13.22□□□□□ -0.29
LIN54-201ENST00000340417 TBC1D3DA0A087WVF3 549 aa13.21□□□□□ -0.29
LIN54-201ENST00000340417 TBC1D3IA0A087WXS9 549 aa13.21□□□□□ -0.29
LIN54-201ENST00000340417 TBC1D3EA0A087X179 549 aa13.21□□□□□ -0.29
LIN54-201ENST00000340417 TBC1D3KA0A087X1G2 549 aa13.21□□□□□ -0.29
LIN54-201ENST00000340417 TBC1D3FA6NER0 549 aaPredicted RBP13.21□□□□□ -0.29
LIN54-201ENST00000340417 TBC1D3LB9A6J9 549 aa13.21□□□□□ -0.29
LIN54-201ENST00000340417 TBC1D3HP0C7X1 549 aa13.21□□□□□ -0.29
LIN54-201ENST00000340417 TBC1D3GQ6DHY5 549 aa13.21□□□□□ -0.29
LIN54-201ENST00000340417 TBC1D3CQ6IPX1 549 aa13.21□□□□□ -0.29
LIN54-201ENST00000340417 DENND1BQ6P3S1 775 aa13.21□□□□□ -0.29
LIN54-201ENST00000340417 FOXR1Q6PIV2 292 aa13.21□□□□□ -0.29
LIN54-201ENST00000340417 TRMT11Q7Z4G4 463 aaKnown RBP13.21□□□□□ -0.29
LIN54-201ENST00000340417 TBC1D3Q8IZP1 549 aaPredicted RBP13.21□□□□□ -0.29
LIN54-201ENST00000340417 NHSQ6T4R5 1651 aa13.21□□□□□ -0.29
LIN54-201ENST00000340417 SNED1Q8TER0 1413 aa13.21□□□□□ -0.29
LIN54-201ENST00000340417 A8MX80 341 aa13.21□□□□□ -0.29
LIN54-201ENST00000340417 HIST2H2ACQ16777 129 aaPredicted RBP13.21□□□□□ -0.29
LIN54-201ENST00000340417 MPPE1Q53F39 396 aa13.21□□□□□ -0.29
LIN54-201ENST00000340417 COBLL1Q53SF7 1204 aa13.21□□□□□ -0.29
LIN54-201ENST00000340417 SH2D4BQ5SQS7 431 aa13.21□□□□□ -0.29
LIN54-201ENST00000340417 TPGS2Q68CL5 300 aa13.21□□□□□ -0.29
LIN54-201ENST00000340417 HIST2H2AA3Q6FI13 130 aa13.21□□□□□ -0.29
LIN54-201ENST00000340417 MAMDC4Q6UXC1 1216 aa13.21□□□□□ -0.29
LIN54-201ENST00000340417 C2orf15Q8WU43 125 aaKnown RBP13.21□□□□□ -0.29
LIN54-201ENST00000340417 MTMR8Q96EF0 704 aa13.21□□□□□ -0.29
LIN54-201ENST00000340417 GMIPQ9P107 970 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms