RNA–Protein interactions for RNA: ENST00000340369.3

XIRP1-201, Transcript of xin actin binding repeat containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XIRP1, Length 6,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP1-201ENST00000340369 CENPCQ03188 943 aa13□□□□□ -0.33
XIRP1-201ENST00000340369 STK4Q13043 487 aa13□□□□□ -0.33
XIRP1-201ENST00000340369 CLEC16AQ2KHT3 1053 aa13□□□□□ -0.33
XIRP1-201ENST00000340369 E4F1Q66K89 784 aaPredicted RBP13□□□□□ -0.33
XIRP1-201ENST00000340369 MTERF3Q96E29 417 aa13□□□□□ -0.33
XIRP1-201ENST00000340369 PNKPQ96T60 521 aa13□□□□□ -0.33
XIRP1-201ENST00000340369 SH3GL2Q99962 352 aa13□□□□□ -0.33
XIRP1-201ENST00000340369 KCNF1Q9H3M0 494 aa13□□□□□ -0.33
XIRP1-201ENST00000340369 C17orf75Q9HAS0 396 aa13□□□□□ -0.33
XIRP1-201ENST00000340369 RNF112Q9ULX5 631 aa13□□□□□ -0.33
XIRP1-201ENST00000340369 PCDHB2Q9Y5E7 798 aa13□□□□□ -0.33
XIRP1-201ENST00000340369 PDZK1P1A8MUH7 402 aa13□□□□□ -0.33
XIRP1-201ENST00000340369 GOLGA8TH3BQL2 631 aa13□□□□□ -0.33
XIRP1-201ENST00000340369 NPTX2P47972 431 aa13□□□□□ -0.33
XIRP1-201ENST00000340369 DDX39BQ13838 428 aaKnown RBP13□□□□□ -0.33
XIRP1-201ENST00000340369 FAXCQ5TGI0 409 aa13□□□□□ -0.33
XIRP1-201ENST00000340369 DENND5BQ6ZUT9 1274 aa13□□□□□ -0.33
XIRP1-201ENST00000340369 CCDC103Q8IW40 242 aa13□□□□□ -0.33
XIRP1-201ENST00000340369 ROPN1BQ9BZX4 212 aaPredicted RBP13□□□□□ -0.33
XIRP1-201ENST00000340369 ROPN1Q9HAT0 212 aaPredicted RBP13□□□□□ -0.33
XIRP1-201ENST00000340369 GEMIN8Q9NWZ8 242 aaKnown RBP13□□□□□ -0.33
XIRP1-201ENST00000340369 TSC22D4Q9Y3Q8 395 aa13□□□□□ -0.33
XIRP1-201ENST00000340369 RIC1Q4ADV7 1423 aa13□□□□□ -0.33
XIRP1-201ENST00000340369 SKAP2O75563 359 aaPredicted RBP12.99□□□□□ -0.33
XIRP1-201ENST00000340369 DLGAP3O95886 979 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 TARSP26639 723 aaKnown RBP12.99□□□□□ -0.33
XIRP1-201ENST00000340369 HTRA3P83110 453 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 CCZ1BP86790 482 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 CCZ1P86791 482 aaPredicted RBP12.99□□□□□ -0.33
XIRP1-201ENST00000340369 NR1I3Q14994 352 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 GALNTL6Q49A17 601 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 SETD3Q86TU7 594 aaPredicted RBP12.99□□□□□ -0.33
XIRP1-201ENST00000340369 ZNF410Q86VK4 478 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 SLC44A2Q8IWA5 706 aaPredicted RBP12.99□□□□□ -0.33
XIRP1-201ENST00000340369 BLOC1S5Q8TDH9 187 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 EIF3LQ9Y262 564 aaKnown RBP12.99□□□□□ -0.33
XIRP1-201ENST00000340369 PXDNQ92626 1479 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 STX7O15400 261 aaKnown RBP12.99□□□□□ -0.33
XIRP1-201ENST00000340369 SEPT4O43236 478 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 RBP3P10745 1247 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 AXLP30530 894 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 SREBF1P36956 1147 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 FAM83EQ2M2I3 478 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 UGT3A1Q6NUS8 523 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 UNC45BQ8IWX7 931 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 DTNBP1Q96EV8 351 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 CLDND1Q9NY35 253 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 USP2O75604 605 aaPredicted RBP12.99□□□□□ -0.33
XIRP1-201ENST00000340369 SELPP16109 830 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 SERPINB5P36952 375 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 UBXN2BQ14CS0 331 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 USP41Q3LFD5 358 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 ZNF786Q8N393 782 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 VMP1Q96GC9 406 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 SF3B1O75533 1304 aaKnown RBP eCLIP12.99□□□□□ -0.33
XIRP1-201ENST00000340369 RGS5O15539 181 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 DARSP14868 501 aaKnown RBP12.99□□□□□ -0.33
XIRP1-201ENST00000340369 COILP38432 576 aaPredicted RBP12.99□□□□□ -0.33
XIRP1-201ENST00000340369 COPAP53621 1224 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 CNTN1Q12860 1018 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 CSTF3Q12996 717 aaKnown RBP12.99□□□□□ -0.33
XIRP1-201ENST00000340369 IFNL1Q8IU54 200 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 ANKRD49Q8WVL7 239 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 PURBQ96QR8 312 aaKnown RBP12.99□□□□□ -0.33
XIRP1-201ENST00000340369 ALG6Q9Y672 507 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 SALL1Q9NSC2 1324 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 TMEM253P0C7T8 217 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 TMED10P49755 219 aaKnown RBP12.99□□□□□ -0.33
XIRP1-201ENST00000340369 NME5P56597 212 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 RPS7P62081 194 aaKnown RBP12.99□□□□□ -0.33
XIRP1-201ENST00000340369 OVGP1Q12889 678 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 KCTD17Q8N5Z5 321 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.99□□□□□ -0.33
XIRP1-201ENST00000340369 MRGBPQ9NV56 204 aa12.99□□□□□ -0.33
XIRP1-201ENST00000340369 ASGR1P07306 291 aa12.98□□□□□ -0.33
XIRP1-201ENST00000340369 PSMA4P25789 261 aaKnown RBP12.98□□□□□ -0.33
XIRP1-201ENST00000340369 ACOX1Q15067 660 aa12.98□□□□□ -0.33
XIRP1-201ENST00000340369 SLC30A9Q6PML9 568 aa12.98□□□□□ -0.33
XIRP1-201ENST00000340369 HDDC2Q7Z4H3 204 aa12.98□□□□□ -0.33
XIRP1-201ENST00000340369 RIBC1Q8N443 379 aaPredicted RBP12.98□□□□□ -0.33
XIRP1-201ENST00000340369 C1orf131Q8NDD1 294 aaKnown RBP12.98□□□□□ -0.33
XIRP1-201ENST00000340369 MDM1Q8TC05 714 aa12.98□□□□□ -0.33
XIRP1-201ENST00000340369 USP13Q92995 863 aaPredicted RBP12.98□□□□□ -0.33
XIRP1-201ENST00000340369 FBXO44Q9H4M3 255 aa12.98□□□□□ -0.33
XIRP1-201ENST00000340369 MRPL42Q9Y6G3 142 aaKnown RBP12.98□□□□□ -0.33
XIRP1-201ENST00000340369 TRIM49D1C9J1S8 452 aa12.98□□□□□ -0.33
XIRP1-201ENST00000340369 SLC9A3R1O14745 358 aaPredicted RBP12.98□□□□□ -0.33
XIRP1-201ENST00000340369 CYLC2Q14093 348 aaPredicted RBP12.98□□□□□ -0.33
XIRP1-201ENST00000340369 CACHD1Q5VU97 1274 aa12.98□□□□□ -0.33
XIRP1-201ENST00000340369 LINC00523Q86TU6 105 aa12.98□□□□□ -0.33
XIRP1-201ENST00000340369 NDEL1Q9GZM8 345 aa12.98□□□□□ -0.33
XIRP1-201ENST00000340369 KRT84Q9NSB2 600 aa12.98□□□□□ -0.33
XIRP1-201ENST00000340369 ATP5BP06576 529 aaKnown RBP12.98□□□□□ -0.33
XIRP1-201ENST00000340369 TGM2P21980 687 aa12.98□□□□□ -0.33
XIRP1-201ENST00000340369 NCKAP1LP55160 1127 aa12.98□□□□□ -0.33
XIRP1-201ENST00000340369 CCDC33Q8N5R6 958 aa12.98□□□□□ -0.33
XIRP1-201ENST00000340369 MAP3K14Q99558 947 aa12.98□□□□□ -0.33
XIRP1-201ENST00000340369 ERP44Q9BS26 406 aa12.98□□□□□ -0.33
XIRP1-201ENST00000340369 RUVBL2Q9Y230 463 aaKnown RBP12.98□□□□□ -0.33
XIRP1-201ENST00000340369 SLIT1O75093 1534 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms