RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 SERAC1Q96JX3 654 aa13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 HSFY1Q96LI6 401 aa13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 ZNF560Q96MR9 790 aa13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 OLFM3Q96PB7 478 aa13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 QKIQ96PU8 341 aaKnown RBP eCLIP13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 SMC6Q96SB8 1091 aa13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 ETNK1Q9HBU6 452 aa13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 PNPLA8Q9NP80 782 aa13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 AP4E1Q9UPM8 1137 aa13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 NR2E3Q9Y5X4 410 aa13.47□□□□□ -0.25
CDK5RAP1-201ENST00000339269 CFAP69A5D8W1 941 aa13.46□□□□□ -0.25
CDK5RAP1-201ENST00000339269 CXorf49A8MYA2 514 aaPredicted RBP13.46□□□□□ -0.25
CDK5RAP1-201ENST00000339269 XPO1O14980 1071 aaKnown RBP13.46□□□□□ -0.25
CDK5RAP1-201ENST00000339269 SUN1O94901 812 aa13.46□□□□□ -0.25
CDK5RAP1-201ENST00000339269 VAV1P15498 845 aa13.46□□□□□ -0.25
CDK5RAP1-201ENST00000339269 AFF1P51825 1210 aaKnown RBP13.46□□□□□ -0.25
CDK5RAP1-201ENST00000339269 PURAQ00577 322 aaKnown RBP13.46□□□□□ -0.25
CDK5RAP1-201ENST00000339269 SPARCL1Q14515 664 aa13.46□□□□□ -0.25
CDK5RAP1-201ENST00000339269 KBTBD12Q3ZCT8 623 aa13.46□□□□□ -0.25
CDK5RAP1-201ENST00000339269 RNF43Q68DV7 783 aa13.46□□□□□ -0.25
CDK5RAP1-201ENST00000339269 PIGZQ86VD9 579 aa13.46□□□□□ -0.25
CDK5RAP1-201ENST00000339269 B3GALNT2Q8NCR0 500 aa13.46□□□□□ -0.25
CDK5RAP1-201ENST00000339269 TRPV1Q8NER1 839 aa13.46□□□□□ -0.25
CDK5RAP1-201ENST00000339269 WNT8BQ93098 351 aa13.46□□□□□ -0.25
CDK5RAP1-201ENST00000339269 NT5C3BQ969T7 300 aa13.46□□□□□ -0.25
CDK5RAP1-201ENST00000339269 ZFP42Q96MM3 310 aa13.46□□□□□ -0.25
CDK5RAP1-201ENST00000339269 KLF6Q99612 283 aaPredicted RBP13.46□□□□□ -0.25
CDK5RAP1-201ENST00000339269 HNRNPABQ99729 332 aaKnown RBP13.46□□□□□ -0.25
CDK5RAP1-201ENST00000339269 TRIM56Q9BRZ2 755 aaKnown RBP13.46□□□□□ -0.25
CDK5RAP1-201ENST00000339269 DHX35Q9H5Z1 703 aaKnown RBP13.46□□□□□ -0.25
CDK5RAP1-201ENST00000339269 SMYD2Q9NRG4 433 aa13.46□□□□□ -0.25
CDK5RAP1-201ENST00000339269 TMPRSS4Q9NRS4 437 aa13.46□□□□□ -0.25
CDK5RAP1-201ENST00000339269 DTLQ9NZJ0 730 aa13.46□□□□□ -0.25
CDK5RAP1-201ENST00000339269 SLC17A7Q9P2U7 560 aa13.46□□□□□ -0.25
CDK5RAP1-201ENST00000339269 DNAH12Q6ZR08 3092 aa13.46□□□□□ -0.26
CDK5RAP1-201ENST00000339269 GABRDO14764 452 aa13.46□□□□□ -0.26
CDK5RAP1-201ENST00000339269 EDF1O60869 148 aaKnown RBP13.46□□□□□ -0.26
CDK5RAP1-201ENST00000339269 GCATO75600 419 aa13.46□□□□□ -0.26
CDK5RAP1-201ENST00000339269 DGKIO75912 1065 aa13.46□□□□□ -0.26
CDK5RAP1-201ENST00000339269 ZBED1O96006 694 aa13.46□□□□□ -0.26
CDK5RAP1-201ENST00000339269 DHRS4L1P0CG22 281 aa13.46□□□□□ -0.26
CDK5RAP1-201ENST00000339269 CA4P22748 312 aa13.46□□□□□ -0.26
CDK5RAP1-201ENST00000339269 ADRA1DP25100 572 aa13.46□□□□□ -0.26
CDK5RAP1-201ENST00000339269 PNPLA4P41247 253 aa13.46□□□□□ -0.26
CDK5RAP1-201ENST00000339269 NEK3P51956 506 aa13.46□□□□□ -0.26
CDK5RAP1-201ENST00000339269 FAAP100Q0VG06 881 aa13.46□□□□□ -0.26
CDK5RAP1-201ENST00000339269 BNIP1Q12981 228 aa13.46□□□□□ -0.26
CDK5RAP1-201ENST00000339269 SLC45A4Q5BKX6 768 aa13.46□□□□□ -0.26
CDK5RAP1-201ENST00000339269 STRADAQ7RTN6 431 aa13.46□□□□□ -0.26
CDK5RAP1-201ENST00000339269 SUGP1Q8IWZ8 645 aaKnown RBP13.46□□□□□ -0.26
CDK5RAP1-201ENST00000339269 PALM2Q8IXS6 379 aa13.46□□□□□ -0.26
CDK5RAP1-201ENST00000339269 TOP6BLQ8N6T0 577 aa13.46□□□□□ -0.26
CDK5RAP1-201ENST00000339269 RNF169Q8NCN4 708 aa13.46□□□□□ -0.26
CDK5RAP1-201ENST00000339269 APPL2Q8NEU8 664 aa13.46□□□□□ -0.26
CDK5RAP1-201ENST00000339269 TSPAN18Q96SJ8 248 aa13.46□□□□□ -0.26
CDK5RAP1-201ENST00000339269 SNX25Q9H3E2 840 aa13.46□□□□□ -0.26
CDK5RAP1-201ENST00000339269 TMEM30AQ9NV96 361 aa13.46□□□□□ -0.26
CDK5RAP1-201ENST00000339269 FZD10Q9ULW2 581 aa13.46□□□□□ -0.26
CDK5RAP1-201ENST00000339269 STARD13Q9Y3M8 1113 aa13.46□□□□□ -0.26
CDK5RAP1-201ENST00000339269 C17orf102A2RUQ5 167 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 H0YHG0 523 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 FAM155BO75949 473 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 AMHP03971 560 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 CYP2B6P20813 491 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 AMPD1P23109 780 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 ACAT1P24752 427 aaKnown RBP13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 MSH2P43246 934 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 ETV4P43268 484 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 NDUFV1P49821 464 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 CPT1AP50416 773 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 RABGGTBP53611 331 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 ADIGQ0VDE8 80 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 SV2CQ496J9 727 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 WSCD1Q658N2 575 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 CYB5D1Q6P9G0 228 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 LVRNQ6Q4G3 990 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 KCNT2Q6UVM3 1135 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 HFE2Q6ZVN8 426 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 DEFB106AQ8N104 65 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 PLCD3Q8N3E9 789 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 MCUQ8NE86 351 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 CYTH2Q99418 400 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 NCAPGQ9BPX3 1015 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 PAIP2Q9BPZ3 127 aaKnown RBP13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 MCOLN1Q9GZU1 580 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 KLC4Q9NSK0 619 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 KANSL3Q9P2N6 904 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 TSC2P49815 1807 aa13.45□□□□□ -0.26
CDK5RAP1-201ENST00000339269 I6L893 689 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP1-201ENST00000339269 GOLGA8RI6L899 631 aa13.44□□□□□ -0.26
CDK5RAP1-201ENST00000339269 DAB1O75553 588 aa13.44□□□□□ -0.26
CDK5RAP1-201ENST00000339269 GNRH1P01148 92 aa13.44□□□□□ -0.26
CDK5RAP1-201ENST00000339269 FYNP06241 537 aa13.44□□□□□ -0.26
CDK5RAP1-201ENST00000339269 GOT1P17174 413 aa13.44□□□□□ -0.26
CDK5RAP1-201ENST00000339269 HOXD10P28358 340 aa13.44□□□□□ -0.26
CDK5RAP1-201ENST00000339269 GRIA1P42261 906 aa13.44□□□□□ -0.26
CDK5RAP1-201ENST00000339269 MATKP42679 507 aa13.44□□□□□ -0.26
CDK5RAP1-201ENST00000339269 ACADSBP45954 432 aa13.44□□□□□ -0.26
CDK5RAP1-201ENST00000339269 SLC18A2Q05940 514 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms