RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 TXNDC8Q6A555 127 aa10.22□□□□□ -0.77
SYN3-201ENST00000332840 ACAD10Q6JQN1 1059 aa10.22□□□□□ -0.77
SYN3-201ENST00000332840 RALGPS2Q86X27 583 aaPredicted RBP10.22□□□□□ -0.77
SYN3-201ENST00000332840 DDX42Q86XP3 938 aaKnown RBP eCLIP10.22□□□□□ -0.77
SYN3-201ENST00000332840 RHOT2Q8IXI1 618 aa10.22□□□□□ -0.77
SYN3-201ENST00000332840 FUKQ8N0W3 1084 aa10.22□□□□□ -0.77
SYN3-201ENST00000332840 PDCD7Q8N8D1 485 aaKnown RBP10.22□□□□□ -0.77
SYN3-201ENST00000332840 DTWD2Q8NBA8 298 aa10.22□□□□□ -0.77
SYN3-201ENST00000332840 SLC2A14Q8TDB8 520 aa10.22□□□□□ -0.77
SYN3-201ENST00000332840 RFFLQ8WZ73 363 aa10.22□□□□□ -0.77
SYN3-201ENST00000332840 NKD2Q969F2 451 aaPredicted RBP10.22□□□□□ -0.77
SYN3-201ENST00000332840 PCDHB18PQ96TA0 734 aa10.22□□□□□ -0.77
SYN3-201ENST00000332840 HNRNPABQ99729 332 aaKnown RBP10.22□□□□□ -0.77
SYN3-201ENST00000332840 SDCBP2Q9H190 292 aa10.22□□□□□ -0.77
SYN3-201ENST00000332840 CSNK1G1Q9HCP0 422 aa10.22□□□□□ -0.77
SYN3-201ENST00000332840 TRPC7Q9HCX4 862 aa10.22□□□□□ -0.77
SYN3-201ENST00000332840 ACP6Q9NPH0 428 aa10.22□□□□□ -0.77
SYN3-201ENST00000332840 HEBP1Q9NRV9 189 aa10.22□□□□□ -0.77
SYN3-201ENST00000332840 SALL4Q9UJQ4 1053 aa10.22□□□□□ -0.77
SYN3-201ENST00000332840 CDC23Q9UJX2 597 aa10.22□□□□□ -0.77
SYN3-201ENST00000332840 ARHGAP26Q9UNA1 814 aa10.22□□□□□ -0.77
SYN3-201ENST00000332840 NME7Q9Y5B8 376 aa10.22□□□□□ -0.77
SYN3-201ENST00000332840 MRFAP1Q9Y605 127 aa10.22□□□□□ -0.77
SYN3-201ENST00000332840 CAPN6Q9Y6Q1 641 aa10.22□□□□□ -0.77
SYN3-201ENST00000332840 OTOGLQ3ZCN5 2332 aa10.22□□□□□ -0.77
SYN3-201ENST00000332840 PATJQ8NI35 1801 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 UQCRHLA0A096LP55 91 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 ZNF840PA6NDX5 716 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 FAM170BA6NMN3 283 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 PROB1E7EW31 1015 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 THAP12O43422 761 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 PI15O43692 258 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 TADA3O75528 432 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 CYP1A1P04798 512 aaPredicted RBP10.21□□□□□ -0.77
SYN3-201ENST00000332840 UQCRHP07919 91 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 PAEPP09466 180 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 PRLRP16471 622 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 HDCP19113 662 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 ABCB4P21439 1286 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 NBL1P41271 181 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 TUBP50607 506 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 SLC5A3P53794 718 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 HADHBP55084 474 aaKnown RBP10.21□□□□□ -0.77
SYN3-201ENST00000332840 FOXK2Q01167 660 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 LRRC32Q14392 662 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 TCEAL1Q15170 157 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 ITPRIPL2Q3MIP1 535 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 SYCE1Q8N0S2 351 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 UBE2Q2Q8WVN8 375 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 ZNF606Q8WXB4 792 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 FAM3CQ92520 227 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 USP13Q92995 863 aaPredicted RBP10.21□□□□□ -0.77
SYN3-201ENST00000332840 FBXO32Q969P5 355 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 RSPRY1Q96DX4 576 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 CYFIP2Q96F07 1278 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 TRIM11Q96F44 468 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 FOXQ1Q9C009 403 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 TAS2R14Q9NYV8 317 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 HMGXB4Q9UGU5 601 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 KIAA1257Q9ULG3 409 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 SAR1BQ9Y6B6 198 aa10.21□□□□□ -0.77
SYN3-201ENST00000332840 KMT2BQ9UMN6 2715 aaPredicted RBP10.21□□□□□ -0.78
SYN3-201ENST00000332840 COL4A3Q01955 1670 aa10.21□□□□□ -0.78
SYN3-201ENST00000332840 SCN1AP35498 2009 aa10.21□□□□□ -0.78
SYN3-201ENST00000332840 CACNA1GO43497 2377 aa10.21□□□□□ -0.78
SYN3-201ENST00000332840 MED19A0JLT2 244 aaPredicted RBP10.2□□□□□ -0.78
SYN3-201ENST00000332840 FAM92AA1XBS5 289 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 CLDN5O00501 218 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 SLC9A3R1O14745 358 aaPredicted RBP10.2□□□□□ -0.78
SYN3-201ENST00000332840 MED7O43513 233 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 PALMO75781 387 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 ATP1A1P05023 1023 aaKnown RBP10.2□□□□□ -0.78
SYN3-201ENST00000332840 UNGP13051 313 aaPredicted RBP10.2□□□□□ -0.78
SYN3-201ENST00000332840 CCDC130P13994 396 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 USP46P62068 366 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 SLC7A9P82251 487 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 TAF10Q12962 218 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 USP4Q13107 963 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 NR1H3Q13133 447 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 PPP2R5DQ14738 602 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 WHAMMP3Q1A5X7 153 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 SNX30Q5VWJ9 437 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 ZC3H14Q6PJT7 736 aaKnown RBP10.2□□□□□ -0.78
SYN3-201ENST00000332840 PAQR9Q6ZVX9 377 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 TADA2BQ86TJ2 420 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 DNAAF5Q86Y56 855 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 CPA6Q8N4T0 437 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 CEP112Q8N8E3 955 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 MNS1Q8NEH6 495 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 TPCN2Q8NHX9 752 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 SLC35G2Q8TBE7 412 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 ATP2A3Q93084 1043 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 CLDN23Q96B33 292 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 TMEM176AQ96HP8 235 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 VCPIP1Q96JH7 1222 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 HEXIM2Q96MH2 286 aaKnown RBP10.2□□□□□ -0.78
SYN3-201ENST00000332840 KCNK16Q96T55 309 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 THAP2Q9H0W7 228 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 FAM49BQ9NUQ9 324 aa10.2□□□□□ -0.78
SYN3-201ENST00000332840 IL37Q9NZH6 218 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms