RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 MFSD4BQ5TF39 518 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 DEFB107AQ8IZN7 70 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 CBWD1Q9BRT8 395 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 GPRC5CQ9NQ84 441 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 TCF7L2Q9NQB0 619 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 A0A0G2JLW4 131 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 FAM25AB3EWG3 89 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 FAM25CB3EWG5 89 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 FAM25GB3EWG6 89 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 SMNDC1O75940 238 aaKnown RBP eCLIP21.59■■□□□ 1.05
RNF40-201ENST00000324685 ANKRD13AQ8IZ07 590 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 COPG2Q9UBF2 871 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 ENOPH1Q9UHY7 261 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 FAM47E-STBD1D6RA91 191 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 ZBTB22O15209 634 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 RIPK2O43353 540 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 TRIM13O60858 407 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 SKIV2L2P42285 1042 aaKnown RBP21.59■■□□□ 1.05
RNF40-201ENST00000324685 HALP42357 657 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 RAP1GAPP47736 663 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 ARMC7Q9H6L4 198 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 ZNF862O60290 1169 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 BAIAP3O94812 1187 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 MAP3K6O95382 1288 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 THPOP40225 353 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 MTA1Q13330 715 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 MIB1Q86YT6 1006 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 CDK5RAP1Q96SZ6 601 aaKnown RBP21.59■■□□□ 1.05
RNF40-201ENST00000324685 NAALADL1Q9UQQ1 740 aa21.59■■□□□ 1.05
RNF40-201ENST00000324685 COX10Q12887 443 aa21.58■■□□□ 1.05
RNF40-201ENST00000324685 ZCCHC8Q6NZY4 707 aaKnown RBP21.58■■□□□ 1.05
RNF40-201ENST00000324685 AGBL3Q8NEM8 1001 aa21.58■■□□□ 1.05
RNF40-201ENST00000324685 GINS4Q9BRT9 223 aa21.58■■□□□ 1.05
RNF40-201ENST00000324685 DCLK3Q9C098 648 aa21.58■■□□□ 1.05
RNF40-201ENST00000324685 SERHL2Q9H4I8 314 aa21.58■■□□□ 1.05
RNF40-201ENST00000324685 SERHLQ9NQF3 203 aa21.58■■□□□ 1.05
RNF40-201ENST00000324685 RABGEF1Q9UJ41 708 aa21.58■■□□□ 1.05
RNF40-201ENST00000324685 KRT6AP02538 564 aa21.58■■□□□ 1.05
RNF40-201ENST00000324685 KRT6BP04259 564 aa21.58■■□□□ 1.05
RNF40-201ENST00000324685 MAPTP10636 758 aaKnown RBP21.58■■□□□ 1.05
RNF40-201ENST00000324685 PPP2R1BP30154 601 aa21.58■■□□□ 1.05
RNF40-201ENST00000324685 RFX3P48380 749 aa21.58■■□□□ 1.05
RNF40-201ENST00000324685 KRT6CP48668 564 aa21.58■■□□□ 1.05
RNF40-201ENST00000324685 RSBN1Q5VWQ0 802 aaPredicted RBP21.58■■□□□ 1.05
RNF40-201ENST00000324685 SLC47A2Q86VL8 602 aa21.58■■□□□ 1.05
RNF40-201ENST00000324685 BDH2Q9BUT1 245 aa21.58■■□□□ 1.05
RNF40-201ENST00000324685 GEMIN8Q9NWZ8 242 aaKnown RBP21.58■■□□□ 1.05
RNF40-201ENST00000324685 KLHL28Q9NXS3 571 aa21.58■■□□□ 1.05
RNF40-201ENST00000324685 RNASEH1O60930 286 aaKnown RBP21.58■■□□□ 1.04
RNF40-201ENST00000324685 RXFP2Q8WXD0 754 aa21.58■■□□□ 1.04
RNF40-201ENST00000324685 NMD3Q96D46 503 aaKnown RBP21.58■■□□□ 1.04
RNF40-201ENST00000324685 SMAD5Q99717 465 aaKnown RBP21.58■■□□□ 1.04
RNF40-201ENST00000324685 BTBD10Q9BSF8 475 aa21.58■■□□□ 1.04
RNF40-201ENST00000324685 PGAM1P18669 254 aa21.58■■□□□ 1.04
RNF40-201ENST00000324685 RENBPP51606 427 aa21.58■■□□□ 1.04
RNF40-201ENST00000324685 INAQ16352 499 aa21.58■■□□□ 1.04
RNF40-201ENST00000324685 PKN1Q16512 942 aa21.58■■□□□ 1.04
RNF40-201ENST00000324685 ERMARDQ5T6L9 678 aa21.58■■□□□ 1.04
RNF40-201ENST00000324685 LPCAT2Q7L5N7 544 aa21.58■■□□□ 1.04
RNF40-201ENST00000324685 ZNF720Q7Z2F6 126 aa21.58■■□□□ 1.04
RNF40-201ENST00000324685 ERO1BQ86YB8 467 aa21.58■■□□□ 1.04
RNF40-201ENST00000324685 KAT2BQ92831 832 aa21.58■■□□□ 1.04
RNF40-201ENST00000324685 TMEM169Q96HH4 297 aa21.58■■□□□ 1.04
RNF40-201ENST00000324685 MAML3Q96JK9 1138 aa21.58■■□□□ 1.04
RNF40-201ENST00000324685 ZFRQ96KR1 1074 aaKnown RBP21.58■■□□□ 1.04
RNF40-201ENST00000324685 OSGEPQ9NPF4 335 aa21.58■■□□□ 1.04
RNF40-201ENST00000324685 CISHQ9NSE2 258 aa21.58■■□□□ 1.04
RNF40-201ENST00000324685 TRPM5Q9NZQ8 1165 aa21.58■■□□□ 1.04
RNF40-201ENST00000324685 INO80Q9ULG1 1556 aaPredicted RBP21.58■■□□□ 1.04
RNF40-201ENST00000324685 VPS4BO75351 444 aa21.57■■□□□ 1.04
RNF40-201ENST00000324685 B3GAT3O94766 335 aa21.57■■□□□ 1.04
RNF40-201ENST00000324685 JCHAINP01591 159 aa21.57■■□□□ 1.04
RNF40-201ENST00000324685 CD151P48509 253 aa21.57■■□□□ 1.04
RNF40-201ENST00000324685 SPANXN3Q5MJ09 141 aa21.57■■□□□ 1.04
RNF40-201ENST00000324685 CDK20Q8IZL9 346 aa21.57■■□□□ 1.04
RNF40-201ENST00000324685 EID3Q8N140 333 aa21.57■■□□□ 1.04
RNF40-201ENST00000324685 DPY30Q9C005 99 aa21.57■■□□□ 1.04
RNF40-201ENST00000324685 AVENQ9NQS1 362 aaPredicted RBP21.57■■□□□ 1.04
RNF40-201ENST00000324685 CROTQ9UKG9 612 aa21.57■■□□□ 1.04
RNF40-201ENST00000324685 ITGA11Q9UKX5 1188 aa21.57■■□□□ 1.04
RNF40-201ENST00000324685 HPGDP15428 266 aa21.57■■□□□ 1.04
RNF40-201ENST00000324685 CRABP2P29373 138 aa21.57■■□□□ 1.04
RNF40-201ENST00000324685 GMPSP49915 693 aaPredicted RBP21.57■■□□□ 1.04
RNF40-201ENST00000324685 PTPN11Q06124 597 aaPredicted RBP21.57■■□□□ 1.04
RNF40-201ENST00000324685 NR6A1Q15406 480 aa21.57■■□□□ 1.04
RNF40-201ENST00000324685 C2CD6Q53TS8 623 aa21.57■■□□□ 1.04
RNF40-201ENST00000324685 ZNF614Q8N883 585 aa21.57■■□□□ 1.04
RNF40-201ENST00000324685 APOPT1Q96IL0 206 aa21.57■■□□□ 1.04
RNF40-201ENST00000324685 NT5MQ9NPB1 228 aa21.57■■□□□ 1.04
RNF40-201ENST00000324685 DUSP12Q9UNI6 340 aa21.57■■□□□ 1.04
RNF40-201ENST00000324685 SPHKAPQ2M3C7 1700 aa21.57■■□□□ 1.04
RNF40-201ENST00000324685 LINC00854A0A1B0GVQ3 168 aa21.57■■□□□ 1.04
RNF40-201ENST00000324685 HSMCR30P0CW71 290 aa21.57■■□□□ 1.04
RNF40-201ENST00000324685 PBLDP30039 288 aaPredicted RBP21.57■■□□□ 1.04
RNF40-201ENST00000324685 PCNX4Q63HM2 1172 aa21.57■■□□□ 1.04
RNF40-201ENST00000324685 FAM45AQ8TCE6 357 aa21.57■■□□□ 1.04
RNF40-201ENST00000324685 TRAPPC9Q96Q05 1148 aa21.57■■□□□ 1.04
RNF40-201ENST00000324685 VPS28Q9UK41 221 aa21.57■■□□□ 1.04
RNF40-201ENST00000324685 RNF17Q9BXT8 1623 aaKnown RBP21.57■■□□□ 1.04
RNF40-201ENST00000324685 C2CD2LO14523 706 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms